RNA–Protein interactions for RNA: ENST00000568562.1

ATP6V0C-204, Transcript of ATPase H+ transporting V0 subunit c, humanhuman

TSL 3 BASIC

Gene ATP6V0C, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0C-204ENST00000568562 NISCHQ9Y2I1 1504 aa47.31■■■■■ 5.16
ATP6V0C-204ENST00000568562 ABCC9O60706 1549 aa42.94■■■■■ 4.46
ATP6V0C-204ENST00000568562 CCDC180Q9P1Z9 1646 aa42.67■■■■■ 4.42
ATP6V0C-204ENST00000568562 RB1CC1Q8TDY2 1594 aa40.73■■■■■ 4.11
ATP6V0C-204ENST00000568562 DNAJC5BQ9UF47 199 aa40.48■■■■■ 4.07
ATP6V0C-204ENST00000568562 NACADO15069 1562 aa40.35■■■■■ 4.05
ATP6V0C-204ENST00000568562 DCAF8L2P0C7V8 631 aa40.03■■■■■ 4
ATP6V0C-204ENST00000568562 UNC13AQ9UPW8 1703 aa39.96■■■■□ 3.99
ATP6V0C-204ENST00000568562 PABPN1Q86U42 306 aaKnown RBP eCLIP39.88■■■■□ 3.97
ATP6V0C-204ENST00000568562 MYO15BQ96JP2 1530 aa39.63■■■■□ 3.93
ATP6V0C-204ENST00000568562 BICRAQ9NZM4 1560 aa39.58■■■■□ 3.93
ATP6V0C-204ENST00000568562 ZCCHC6Q5VYS8 1495 aaKnown RBP39.17■■■■□ 3.86
ATP6V0C-204ENST00000568562 DCAF1Q9Y4B6 1507 aa39.03■■■■□ 3.84
ATP6V0C-204ENST00000568562 SHROOM4Q9ULL8 1493 aa38.93■■■■□ 3.82
ATP6V0C-204ENST00000568562 SCRIBQ14160 1630 aa38.89■■■■□ 3.82
ATP6V0C-204ENST00000568562 CC2D2AQ9P2K1 1620 aa38.8■■■■□ 3.8
ATP6V0C-204ENST00000568562 CECR2Q9BXF3 1484 aa38.69■■■■□ 3.78
ATP6V0C-204ENST00000568562 EIF4G1Q04637 1599 aaKnown RBP38.63■■■■□ 3.77
ATP6V0C-204ENST00000568562 DNAJC5Q9H3Z4 198 aa37.37■■■■□ 3.57
ATP6V0C-204ENST00000568562 NCAPD3P42695 1498 aa37.2■■■■□ 3.54
ATP6V0C-204ENST00000568562 CUX2O14529 1486 aa37.1■■■■□ 3.53
ATP6V0C-204ENST00000568562 ERCC6Q03468 1493 aa37.09■■■■□ 3.53
ATP6V0C-204ENST00000568562 ATAD2BQ9ULI0 1458 aa37.08■■■■□ 3.53
ATP6V0C-204ENST00000568562 SMARCA4P51532 1647 aa37.03■■■■□ 3.52
ATP6V0C-204ENST00000568562 SMARCA2P51531 1590 aa36.98■■■■□ 3.51
ATP6V0C-204ENST00000568562 HMGXB3Q12766 1538 aa36.96■■■■□ 3.51
ATP6V0C-204ENST00000568562 NESP48681 1621 aa36.81■■■■□ 3.48
ATP6V0C-204ENST00000568562 BAZ1AQ9NRL2 1556 aaPredicted RBP36.76■■■■□ 3.48
ATP6V0C-204ENST00000568562 BAZ1BQ9UIG0 1483 aaKnown RBP36.73■■■■□ 3.47
ATP6V0C-204ENST00000568562 PEG3Q9GZU2 1588 aa36.62■■■■□ 3.45
ATP6V0C-204ENST00000568562 THOC2Q8NI27 1593 aaKnown RBP36.55■■■■□ 3.44
ATP6V0C-204ENST00000568562 LAMC3Q9Y6N6 1575 aa36.49■■■■□ 3.43
ATP6V0C-204ENST00000568562 MROH2BQ7Z745 1585 aa36.48■■■■□ 3.43
ATP6V0C-204ENST00000568562 KIF21AQ7Z4S6 1674 aa36.42■■■■□ 3.42
ATP6V0C-204ENST00000568562 PDS5BQ9NTI5 1447 aa36.22■■■■□ 3.39
ATP6V0C-204ENST00000568562 WIZO95785 1651 aa36.09■■■■□ 3.37
ATP6V0C-204ENST00000568562 CADPSQ9ULU8 1353 aa36.05■■■■□ 3.36
ATP6V0C-204ENST00000568562 MRC2Q9UBG0 1479 aa35.99■■■■□ 3.35
ATP6V0C-204ENST00000568562 WDR62O43379 1518 aa35.93■■■■□ 3.34
ATP6V0C-204ENST00000568562 CEP164Q9UPV0 1460 aa35.79■■■■□ 3.32
ATP6V0C-204ENST00000568562 FANCD2Q9BXW9 1451 aa35.7■■■■□ 3.31
ATP6V0C-204ENST00000568562 TRIM41Q8WV44 630 aa35.68■■■■□ 3.3
ATP6V0C-204ENST00000568562 CFTRP13569 1480 aa35.6■■■■□ 3.29
ATP6V0C-204ENST00000568562 TOP2AP11388 1531 aaKnown RBP35.56■■■■□ 3.28
ATP6V0C-204ENST00000568562 RSF1Q96T23 1441 aaPredicted RBP35.56■■■■□ 3.28
ATP6V0C-204ENST00000568562 URB2Q14146 1524 aaKnown RBP35.45■■■■□ 3.27
ATP6V0C-204ENST00000568562 PRDM2Q13029 1718 aa35.4■■■■□ 3.26
ATP6V0C-204ENST00000568562 OSCARQ8IYS5 282 aa35.28■■■■□ 3.24
ATP6V0C-204ENST00000568562 CCDC88BA6NC98 1476 aa35.11■■■■□ 3.21
ATP6V0C-204ENST00000568562 ZNF608Q9ULD9 1512 aaPredicted RBP35.06■■■■□ 3.2
ATP6V0C-204ENST00000568562 IFT140Q96RY7 1462 aa35.05■■■■□ 3.2
ATP6V0C-204ENST00000568562 RIMBP3CA6NJZ7 1639 aa35.02■■■■□ 3.2
ATP6V0C-204ENST00000568562 RIMBP3BA6NNM3 1639 aa35.02■■■■□ 3.2
ATP6V0C-204ENST00000568562 RIMBP3Q9UFD9 1639 aa35.02■■■■□ 3.2
ATP6V0C-204ENST00000568562 TOPBP1Q92547 1522 aa35■■■■□ 3.19
ATP6V0C-204ENST00000568562 EIF4G3O43432 1585 aaKnown RBP34.91■■■■□ 3.18
ATP6V0C-204ENST00000568562 DNMBPQ6XZF7 1577 aa34.87■■■■□ 3.17
ATP6V0C-204ENST00000568562 ABCC8Q09428 1581 aa34.84■■■■□ 3.17
ATP6V0C-204ENST00000568562 ARHGEF11O15085 1522 aa34.83■■■■□ 3.17
ATP6V0C-204ENST00000568562 CHD1O14646 1710 aa34.77■■■■□ 3.16
ATP6V0C-204ENST00000568562 TARBP1Q13395 1621 aaKnown RBP34.74■■■■□ 3.15
ATP6V0C-204ENST00000568562 AQRO60306 1485 aaKnown RBP eCLIP34.67■■■■□ 3.145e-8■■■■□ 20.2
ATP6V0C-204ENST00000568562 POLA1P09884 1462 aaPredicted RBP34.62■■■■□ 3.13
ATP6V0C-204ENST00000568562 CYB5RLQ6IPT4 315 aa34.52■■■■□ 3.12
ATP6V0C-204ENST00000568562 RAD54L2Q9Y4B4 1467 aa34.51■■■■□ 3.11
ATP6V0C-204ENST00000568562 FBLN2P98095 1184 aa34.49■■■■□ 3.11
ATP6V0C-204ENST00000568562 ARAP1Q96P48 1450 aa34.47■■■■□ 3.11
ATP6V0C-204ENST00000568562 SOGA1O94964 1423 aa34.4■■■■□ 3.1
ATP6V0C-204ENST00000568562 TDRD9Q8NDG6 1382 aaKnown RBP34.39■■■■□ 3.1
ATP6V0C-204ENST00000568562 FGD5Q6ZNL6 1462 aa34.38■■■■□ 3.09
ATP6V0C-204ENST00000568562 SNAPC4Q5SXM2 1469 aa34.36■■■■□ 3.09
ATP6V0C-204ENST00000568562 WDR97A6NE52 1622 aa34.34■■■■□ 3.09
ATP6V0C-204ENST00000568562 CUX1P39880 1505 aa34.3■■■■□ 3.08
ATP6V0C-204ENST00000568562 CLASP1Q7Z460 1538 aa34.27■■■■□ 3.08
ATP6V0C-204ENST00000568562 TRHP20396 242 aaPredicted RBP34.26■■■■□ 3.08
ATP6V0C-204ENST00000568562 SYNJ1O43426 1573 aa34.22■■■■□ 3.07
ATP6V0C-204ENST00000568562 MAGI1Q96QZ7 1491 aaPredicted RBP34.21■■■■□ 3.07
ATP6V0C-204ENST00000568562 GRIN2BQ13224 1484 aa34.17■■■■□ 3.06
ATP6V0C-204ENST00000568562 PBRM1Q86U86 1689 aa34.16■■■■□ 3.06
ATP6V0C-204ENST00000568562 CHMP7Q8WUX9 453 aaPredicted RBP34.16■■■■□ 3.06
ATP6V0C-204ENST00000568562 SYNJ2O15056 1496 aa34.1■■■■□ 3.05
ATP6V0C-204ENST00000568562 GAPVD1Q14C86 1478 aa34.01■■■■□ 3.04
ATP6V0C-204ENST00000568562 ABCA5Q8WWZ7 1642 aa33.98■■■■□ 3.03
ATP6V0C-204ENST00000568562 ABCA10Q8WWZ4 1543 aa33.93■■■■□ 3.02
ATP6V0C-204ENST00000568562 ADAMTS12P58397 1594 aa33.76■■■□□ 2.99
ATP6V0C-204ENST00000568562 GRIN2AQ12879 1464 aa33.76■■■□□ 2.99
ATP6V0C-204ENST00000568562 ERCC6L2Q5T890 1561 aa33.74■■■□□ 2.99
ATP6V0C-204ENST00000568562 SUPT5HO00267 1087 aaKnown RBP33.74■■■□□ 2.99
ATP6V0C-204ENST00000568562 BIVM-ERCC5R4GMW8 1640 aa33.71■■■□□ 2.99
ATP6V0C-204ENST00000568562 CEP170Q5SW79 1584 aa33.7■■■□□ 2.99
ATP6V0C-204ENST00000568562 WRNQ14191 1432 aaPredicted RBP eCLIP33.7■■■□□ 2.98
ATP6V0C-204ENST00000568562 TOP2BQ02880 1626 aa33.66■■■□□ 2.98
ATP6V0C-204ENST00000568562 NUP160Q12769 1436 aa33.63■■■□□ 2.97
ATP6V0C-204ENST00000568562 SHROOM2Q13796 1616 aa33.58■■■□□ 2.97
ATP6V0C-204ENST00000568562 FHAD1B1AJZ9 1412 aa33.55■■■□□ 2.96
ATP6V0C-204ENST00000568562 ERICH3Q5RHP9 1530 aa33.51■■■□□ 2.95
ATP6V0C-204ENST00000568562 AEBP2Q6ZN18 517 aaPredicted RBP33.48■■■□□ 2.95
ATP6V0C-204ENST00000568562 KIF13AQ9H1H9 1805 aa33.37■■■□□ 2.93
ATP6V0C-204ENST00000568562 PRG4Q92954 1404 aaPredicted RBP33.33■■■□□ 2.93
ATP6V0C-204ENST00000568562 RUSC2Q8N2Y8 1516 aa33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms