RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 NISCHQ9Y2I1 1504 aa31.59■■■□□ 2.65
PPP3CA-201ENST00000323055 DCAF8L2P0C7V8 631 aa30.65■■■□□ 2.5
PPP3CA-201ENST00000323055 SHROOM4Q9ULL8 1493 aa29.35■■■□□ 2.29
PPP3CA-201ENST00000323055 SUPT5HO00267 1087 aaKnown RBP29.34■■■□□ 2.29
PPP3CA-201ENST00000323055 EHMT2Q96KQ7 1210 aa27.96■■■□□ 2.07
PPP3CA-201ENST00000323055 FAM9AQ8IZU1 332 aaPredicted RBP27.53■■■□□ 2
PPP3CA-201ENST00000323055 TRIM41Q8WV44 630 aa27.13■■□□□ 1.93
PPP3CA-201ENST00000323055 PCGF6Q9BYE7 350 aa27.03■■□□□ 1.92
PPP3CA-201ENST00000323055 TTBK1Q5TCY1 1321 aaPredicted RBP26.92■■□□□ 1.9
PPP3CA-201ENST00000323055 ABCC9O60706 1549 aa26.8■■□□□ 1.88
PPP3CA-201ENST00000323055 CHIC1Q5VXU3 224 aa26.74■■□□□ 1.87
PPP3CA-201ENST00000323055 RANGAP1P46060 587 aaPredicted RBP26.73■■□□□ 1.87
PPP3CA-201ENST00000323055 APLP2Q06481 763 aa26.72■■□□□ 1.87
PPP3CA-201ENST00000323055 LOC105371045A0A1W2PR82 267 aa26.55■■□□□ 1.84
PPP3CA-201ENST00000323055 UBTFP17480 764 aaKnown RBP26.52■■□□□ 1.84
PPP3CA-201ENST00000323055 PPARGC1BQ86YN6 1023 aaKnown RBP26.41■■□□□ 1.82
PPP3CA-201ENST00000323055 PABPN1Q86U42 306 aaKnown RBP eCLIP26.39■■□□□ 1.82
PPP3CA-201ENST00000323055 ZCCHC6Q5VYS8 1495 aaKnown RBP26.26■■□□□ 1.79
PPP3CA-201ENST00000323055 ATP1B4Q9UN42 357 aaPredicted RBP26.16■■□□□ 1.78
PPP3CA-201ENST00000323055 CCER1Q8TC90 406 aaPredicted RBP26.13■■□□□ 1.77
PPP3CA-201ENST00000323055 TRIM26Q12899 539 aaPredicted RBP26■■□□□ 1.75
PPP3CA-201ENST00000323055 CCDC180Q9P1Z9 1646 aa26■■□□□ 1.75
PPP3CA-201ENST00000323055 ZEB1P37275 1124 aaPredicted RBP25.93■■□□□ 1.74
PPP3CA-201ENST00000323055 SCRIBQ14160 1630 aa25.85■■□□□ 1.73
PPP3CA-201ENST00000323055 HRCP23327 699 aa25.76■■□□□ 1.71
PPP3CA-201ENST00000323055 ITGAEP38570 1179 aa25.57■■□□□ 1.68
PPP3CA-201ENST00000323055 HNRNPUL2Q1KMD3 747 aaKnown RBP25.56■■□□□ 1.68
PPP3CA-201ENST00000323055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.4■■□□□ 1.66
PPP3CA-201ENST00000323055 CENPBP07199 599 aaPredicted RBP25.27■■□□□ 1.64
PPP3CA-201ENST00000323055 CSRNP3Q8WYN3 585 aa25.27■■□□□ 1.64
PPP3CA-201ENST00000323055 RSF1Q96T23 1441 aaPredicted RBP25.25■■□□□ 1.63
PPP3CA-201ENST00000323055 YTHDC1Q96MU7 727 aaKnown RBP25.24■■□□□ 1.63
PPP3CA-201ENST00000323055 PELP1Q8IZL8 1130 aaKnown RBP25.12■■□□□ 1.61
PPP3CA-201ENST00000323055 RB1CC1Q8TDY2 1594 aa25.12■■□□□ 1.61
PPP3CA-201ENST00000323055 MYO15BQ96JP2 1530 aa25.08■■□□□ 1.61
PPP3CA-201ENST00000323055 NACADO15069 1562 aa25.06■■□□□ 1.6
PPP3CA-201ENST00000323055 DCAF1Q9Y4B6 1507 aa25.05■■□□□ 1.6
PPP3CA-201ENST00000323055 FAM50AQ14320 339 aaKnown RBP24.98■■□□□ 1.59
PPP3CA-201ENST00000323055 P3H3Q8IVL6 736 aa24.96■■□□□ 1.59
PPP3CA-201ENST00000323055 CECR2Q9BXF3 1484 aa24.96■■□□□ 1.59
PPP3CA-201ENST00000323055 FBLN2P98095 1184 aa24.82■■□□□ 1.56
PPP3CA-201ENST00000323055 DIEXFQ68CQ4 756 aaKnown RBP24.76■■□□□ 1.55
PPP3CA-201ENST00000323055 MYT1LQ9UL68 1186 aa24.76■■□□□ 1.55
PPP3CA-201ENST00000323055 ARID3CA6NKF2 412 aa24.73■■□□□ 1.55
PPP3CA-201ENST00000323055 POLR3GLQ9BT43 218 aa24.7■■□□□ 1.54
PPP3CA-201ENST00000323055 NEUROD1Q13562 356 aa24.68■■□□□ 1.54
PPP3CA-201ENST00000323055 CNGB1Q14028 1251 aaPredicted RBP24.64■■□□□ 1.53
PPP3CA-201ENST00000323055 TRIM52Q96A61 297 aa24.61■■□□□ 1.53
PPP3CA-201ENST00000323055 BAZ1AQ9NRL2 1556 aaPredicted RBP24.61■■□□□ 1.53
PPP3CA-201ENST00000323055 MROH2BQ7Z745 1585 aa24.6■■□□□ 1.53
PPP3CA-201ENST00000323055 BAZ1BQ9UIG0 1483 aaKnown RBP24.56■■□□□ 1.52
PPP3CA-201ENST00000323055 NEFLP07196 543 aa24.54■■□□□ 1.52
PPP3CA-201ENST00000323055 WRNQ14191 1432 aaPredicted RBP eCLIP24.52■■□□□ 1.52
PPP3CA-201ENST00000323055 CLIP1P30622 1438 aa24.41■■□□□ 1.5
PPP3CA-201ENST00000323055 CEP162Q5TB80 1403 aa24.38■■□□□ 1.49
PPP3CA-201ENST00000323055 ZNF316A6NFI3 1004 aaPredicted RBP24.38■■□□□ 1.49
PPP3CA-201ENST00000323055 EEA1Q15075 1411 aa24.32■■□□□ 1.48
PPP3CA-201ENST00000323055 CCDC88BA6NC98 1476 aa24.3■■□□□ 1.48
PPP3CA-201ENST00000323055 SOGA1O94964 1423 aa24.29■■□□□ 1.48
PPP3CA-201ENST00000323055 GOLGA3Q08378 1498 aa24.29■■□□□ 1.48
PPP3CA-201ENST00000323055 ZNF777Q9ULD5 760 aaPredicted RBP24.29■■□□□ 1.48
PPP3CA-201ENST00000323055 ZNF326Q5BKZ1 582 aaKnown RBP24.28■■□□□ 1.48
PPP3CA-201ENST00000323055 WIZO95785 1651 aa24.23■■□□□ 1.47
PPP3CA-201ENST00000323055 TNIKQ9UKE5 1360 aa24.21■■□□□ 1.47
PPP3CA-201ENST00000323055 ABCC8Q09428 1581 aa24.2■■□□□ 1.47
PPP3CA-201ENST00000323055 CDK11AQ9UQ88 783 aaPredicted RBP24.15■■□□□ 1.46
PPP3CA-201ENST00000323055 KIF27Q86VH2 1401 aa24.14■■□□□ 1.45
PPP3CA-201ENST00000323055 CHIC2Q9UKJ5 165 aa24.12■■□□□ 1.45
PPP3CA-201ENST00000323055 CEP164Q9UPV0 1460 aa24.11■■□□□ 1.45
PPP3CA-201ENST00000323055 ERICH6Q7L0X2 663 aa24.1■■□□□ 1.45
PPP3CA-201ENST00000323055 GTF3C3Q9Y5Q9 886 aa24.05■■□□□ 1.44
PPP3CA-201ENST00000323055 CHMP7Q8WUX9 453 aaPredicted RBP24.04■■□□□ 1.44
PPP3CA-201ENST00000323055 MTUS2Q5JR59 1369 aa24.04■■□□□ 1.44
PPP3CA-201ENST00000323055 ANP32CO43423 234 aa24.01■■□□□ 1.43
PPP3CA-201ENST00000323055 SLC4A1APQ9BWU0 796 aaKnown RBP24.01■■□□□ 1.43
PPP3CA-201ENST00000323055 TOP2AP11388 1531 aaKnown RBP23.98■■□□□ 1.43
PPP3CA-201ENST00000323055 SMARCA2P51531 1590 aa23.93■■□□□ 1.42
PPP3CA-201ENST00000323055 CUX2O14529 1486 aa23.91■■□□□ 1.42
PPP3CA-201ENST00000323055 TONSLQ96HA7 1378 aa23.91■■□□□ 1.42
PPP3CA-201ENST00000323055 ATAD2BQ9ULI0 1458 aa23.88■■□□□ 1.41
PPP3CA-201ENST00000323055 SMARCA4P51532 1647 aa23.87■■□□□ 1.41
PPP3CA-201ENST00000323055 BCANQ96GW7 911 aa23.87■■□□□ 1.41
PPP3CA-201ENST00000323055 ACIN1Q9UKV3 1341 aaKnown RBP23.87■■□□□ 1.41
PPP3CA-201ENST00000323055 DDX10Q13206 875 aaKnown RBP23.85■■□□□ 1.41
PPP3CA-201ENST00000323055 CARMIL1Q5VZK9 1371 aa23.85■■□□□ 1.41
PPP3CA-201ENST00000323055 RRP7BPQ9NSQ0 103 aa23.85■■□□□ 1.41
PPP3CA-201ENST00000323055 HIRIP3Q9BW71 556 aaPredicted RBP23.82■■□□□ 1.4
PPP3CA-201ENST00000323055 RUSC2Q8N2Y8 1516 aa23.75■■□□□ 1.39
PPP3CA-201ENST00000323055 KANK4Q5T7N3 995 aaPredicted RBP23.72■■□□□ 1.39
PPP3CA-201ENST00000323055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.72■■□□□ 1.39
PPP3CA-201ENST00000323055 MIER1Q8N108 512 aa23.71■■□□□ 1.39
PPP3CA-201ENST00000323055 TSPY4P0CV99 314 aa23.7■■□□□ 1.38
PPP3CA-201ENST00000323055 TSPY10P0CW01 314 aa23.7■■□□□ 1.38
PPP3CA-201ENST00000323055 TDRD9Q8NDG6 1382 aaKnown RBP23.68■■□□□ 1.38
PPP3CA-201ENST00000323055 VPS8Q8N3P4 1428 aa23.68■■□□□ 1.38
PPP3CA-201ENST00000323055 CADPSQ9ULU8 1353 aa23.67■■□□□ 1.38
PPP3CA-201ENST00000323055 ERCC6Q03468 1493 aa23.65■■□□□ 1.38
PPP3CA-201ENST00000323055 KCNH8Q96L42 1107 aa23.64■■□□□ 1.38
PPP3CA-201ENST00000323055 PLEKHD1A6NEE1 506 aa23.62■■□□□ 1.37
PPP3CA-201ENST00000323055 NPM1P06748 294 aaKnown RBP eCLIP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms