RNA–Protein interactions for RNA: ENST00000581841.1

EIF4A1-221, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-221ENST00000581841 NISCHQ9Y2I1 1504 aa23.13■■□□□ 1.29
EIF4A1-221ENST00000581841 CCDC180Q9P1Z9 1646 aa20.5■□□□□ 0.87
EIF4A1-221ENST00000581841 ZCCHC6Q5VYS8 1495 aaKnown RBP19.4■□□□□ 0.7
EIF4A1-221ENST00000581841 ABCC9O60706 1549 aa19.31■□□□□ 0.68
EIF4A1-221ENST00000581841 DCAF1Q9Y4B6 1507 aa19.2■□□□□ 0.66
EIF4A1-221ENST00000581841 MYO15BQ96JP2 1530 aa19.06■□□□□ 0.64
EIF4A1-221ENST00000581841 NACADO15069 1562 aa19.02■□□□□ 0.64
EIF4A1-221ENST00000581841 DCAF8L2P0C7V8 631 aa18.98■□□□□ 0.63
EIF4A1-221ENST00000581841 RB1CC1Q8TDY2 1594 aa18.94■□□□□ 0.62
EIF4A1-221ENST00000581841 UNC13AQ9UPW8 1703 aa18.66■□□□□ 0.58
EIF4A1-221ENST00000581841 SCRIBQ14160 1630 aa18.66■□□□□ 0.58
EIF4A1-221ENST00000581841 SHROOM4Q9ULL8 1493 aa18.53■□□□□ 0.56
EIF4A1-221ENST00000581841 BICRAQ9NZM4 1560 aa18.29■□□□□ 0.52
EIF4A1-221ENST00000581841 PABPN1Q86U42 306 aaKnown RBP eCLIP18.03■□□□□ 0.48
EIF4A1-221ENST00000581841 BAZ1AQ9NRL2 1556 aaPredicted RBP17.95■□□□□ 0.46
EIF4A1-221ENST00000581841 SMARCA4P51532 1647 aa17.9■□□□□ 0.46
EIF4A1-221ENST00000581841 CECR2Q9BXF3 1484 aa17.88■□□□□ 0.45
EIF4A1-221ENST00000581841 MROH2BQ7Z745 1585 aa17.81■□□□□ 0.44
EIF4A1-221ENST00000581841 EIF4G1Q04637 1599 aaKnown RBP17.78■□□□□ 0.44
EIF4A1-221ENST00000581841 RSF1Q96T23 1441 aaPredicted RBP17.76■□□□□ 0.43
EIF4A1-221ENST00000581841 WIZO95785 1651 aa17.74■□□□□ 0.43
EIF4A1-221ENST00000581841 PEG3Q9GZU2 1588 aa17.7■□□□□ 0.42
EIF4A1-221ENST00000581841 SUPT5HO00267 1087 aaKnown RBP17.7■□□□□ 0.42
EIF4A1-221ENST00000581841 SMARCA2P51531 1590 aa17.66■□□□□ 0.42
EIF4A1-221ENST00000581841 CC2D2AQ9P2K1 1620 aa17.58■□□□□ 0.41
EIF4A1-221ENST00000581841 TOP2AP11388 1531 aaKnown RBP17.57■□□□□ 0.4
EIF4A1-221ENST00000581841 ATAD2BQ9ULI0 1458 aa17.55■□□□□ 0.4
EIF4A1-221ENST00000581841 HMGXB3Q12766 1538 aa17.52■□□□□ 0.4
EIF4A1-221ENST00000581841 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
EIF4A1-221ENST00000581841 NCAPD3P42695 1498 aa17.45■□□□□ 0.38
EIF4A1-221ENST00000581841 CCDC88BA6NC98 1476 aa17.27■□□□□ 0.36
EIF4A1-221ENST00000581841 PRDM2Q13029 1718 aa17.24■□□□□ 0.35
EIF4A1-221ENST00000581841 DNAJC5BQ9UF47 199 aa17.05■□□□□ 0.32
EIF4A1-221ENST00000581841 LAMC3Q9Y6N6 1575 aa17.02■□□□□ 0.32
EIF4A1-221ENST00000581841 CFTRP13569 1480 aa17■□□□□ 0.31
EIF4A1-221ENST00000581841 CADPSQ9ULU8 1353 aa16.95■□□□□ 0.3
EIF4A1-221ENST00000581841 KIF21AQ7Z4S6 1674 aa16.88■□□□□ 0.29
EIF4A1-221ENST00000581841 ABCC8Q09428 1581 aa16.88■□□□□ 0.29
EIF4A1-221ENST00000581841 NESP48681 1621 aa16.87■□□□□ 0.29
EIF4A1-221ENST00000581841 CHIC1Q5VXU3 224 aa16.83■□□□□ 0.28
EIF4A1-221ENST00000581841 BIVM-ERCC5R4GMW8 1640 aa16.82■□□□□ 0.28
EIF4A1-221ENST00000581841 FANCD2Q9BXW9 1451 aa16.81■□□□□ 0.28
EIF4A1-221ENST00000581841 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
EIF4A1-221ENST00000581841 CEP164Q9UPV0 1460 aa16.78■□□□□ 0.28
EIF4A1-221ENST00000581841 WRNQ14191 1432 aaPredicted RBP eCLIP16.78■□□□□ 0.28
EIF4A1-221ENST00000581841 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
EIF4A1-221ENST00000581841 SYNJ1O43426 1573 aa16.77■□□□□ 0.28
EIF4A1-221ENST00000581841 TRIM41Q8WV44 630 aa16.72■□□□□ 0.27
EIF4A1-221ENST00000581841 DNMBPQ6XZF7 1577 aa16.71■□□□□ 0.27
EIF4A1-221ENST00000581841 CUX1P39880 1505 aa16.7■□□□□ 0.26
EIF4A1-221ENST00000581841 ERCC6Q03468 1493 aa16.65■□□□□ 0.26
EIF4A1-221ENST00000581841 MRC2Q9UBG0 1479 aa16.62■□□□□ 0.25
EIF4A1-221ENST00000581841 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
EIF4A1-221ENST00000581841 THOC2Q8NI27 1593 aaKnown RBP16.61■□□□□ 0.25
EIF4A1-221ENST00000581841 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
EIF4A1-221ENST00000581841 WDR62O43379 1518 aa16.57■□□□□ 0.24
EIF4A1-221ENST00000581841 FGD5Q6ZNL6 1462 aa16.56■□□□□ 0.24
EIF4A1-221ENST00000581841 WDR97A6NE52 1622 aa16.55■□□□□ 0.24
EIF4A1-221ENST00000581841 POLA1P09884 1462 aaPredicted RBP16.5■□□□□ 0.23
EIF4A1-221ENST00000581841 EEA1Q15075 1411 aa16.48■□□□□ 0.23
EIF4A1-221ENST00000581841 TARBP1Q13395 1621 aaKnown RBP16.45■□□□□ 0.22
EIF4A1-221ENST00000581841 ABCA10Q8WWZ4 1543 aa16.42■□□□□ 0.22
EIF4A1-221ENST00000581841 SOGA1O94964 1423 aa16.41■□□□□ 0.22
EIF4A1-221ENST00000581841 PBRM1Q86U86 1689 aa16.4■□□□□ 0.22
EIF4A1-221ENST00000581841 KIF27Q86VH2 1401 aa16.39■□□□□ 0.21
EIF4A1-221ENST00000581841 ABCA5Q8WWZ7 1642 aa16.39■□□□□ 0.21
EIF4A1-221ENST00000581841 CUX2O14529 1486 aa16.38■□□□□ 0.21
EIF4A1-221ENST00000581841 RAD54L2Q9Y4B4 1467 aa16.38■□□□□ 0.21
EIF4A1-221ENST00000581841 IFT140Q96RY7 1462 aa16.37■□□□□ 0.21
EIF4A1-221ENST00000581841 RUSC2Q8N2Y8 1516 aa16.36■□□□□ 0.21
EIF4A1-221ENST00000581841 KIF21BO75037 1637 aa16.34■□□□□ 0.21
EIF4A1-221ENST00000581841 CUL7Q14999 1698 aa16.34■□□□□ 0.21
EIF4A1-221ENST00000581841 FAM9AQ8IZU1 332 aaPredicted RBP16.33■□□□□ 0.2
EIF4A1-221ENST00000581841 EIF4G3O43432 1585 aaKnown RBP16.31■□□□□ 0.2
EIF4A1-221ENST00000581841 ERICH3Q5RHP9 1530 aa16.28■□□□□ 0.2
EIF4A1-221ENST00000581841 CSRNP3Q8WYN3 585 aa16.27■□□□□ 0.2
EIF4A1-221ENST00000581841 GAPVD1Q14C86 1478 aa16.27■□□□□ 0.19
EIF4A1-221ENST00000581841 GOLGA3Q08378 1498 aa16.22■□□□□ 0.19
EIF4A1-221ENST00000581841 TDRD9Q8NDG6 1382 aaKnown RBP16.21■□□□□ 0.19
EIF4A1-221ENST00000581841 ZNF608Q9ULD9 1512 aaPredicted RBP16.2■□□□□ 0.18
EIF4A1-221ENST00000581841 CTTNBP2Q8WZ74 1663 aa16.19■□□□□ 0.18
EIF4A1-221ENST00000581841 GRIN2BQ13224 1484 aa16.19■□□□□ 0.18
EIF4A1-221ENST00000581841 PRXQ9BXM0 1461 aa16.19■□□□□ 0.18
EIF4A1-221ENST00000581841 ADAMTS12P58397 1594 aa16.18■□□□□ 0.18
EIF4A1-221ENST00000581841 AQRO60306 1485 aaKnown RBP eCLIP16.16■□□□□ 0.182e-8■■■□□ 19.1
EIF4A1-221ENST00000581841 IGF1RP08069 1367 aa16.16■□□□□ 0.18
EIF4A1-221ENST00000581841 RAPGEF2Q9Y4G8 1499 aa16.15■□□□□ 0.18
EIF4A1-221ENST00000581841 MAGI1Q96QZ7 1491 aaPredicted RBP16.12■□□□□ 0.17
EIF4A1-221ENST00000581841 CARMIL1Q5VZK9 1371 aa16.12■□□□□ 0.17
EIF4A1-221ENST00000581841 LOC105371045A0A1W2PR82 267 aa16.11■□□□□ 0.17
EIF4A1-221ENST00000581841 SNAPC4Q5SXM2 1469 aa16.1■□□□□ 0.17
EIF4A1-221ENST00000581841 FHAD1B1AJZ9 1412 aa16.08■□□□□ 0.16
EIF4A1-221ENST00000581841 EHMT2Q96KQ7 1210 aa16.07■□□□□ 0.16
EIF4A1-221ENST00000581841 CHD1O14646 1710 aa16.07■□□□□ 0.16
EIF4A1-221ENST00000581841 TNIKQ9UKE5 1360 aa16.06■□□□□ 0.16
EIF4A1-221ENST00000581841 UBTFP17480 764 aaKnown RBP16.05■□□□□ 0.16
EIF4A1-221ENST00000581841 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
EIF4A1-221ENST00000581841 GRIN2AQ12879 1464 aa16■□□□□ 0.15
EIF4A1-221ENST00000581841 DNAJC5Q9H3Z4 198 aa16■□□□□ 0.15
EIF4A1-221ENST00000581841 CEP162Q5TB80 1403 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms