RNA–Protein interactions for RNA: ENST00000475423.1

DKC1-208, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 2

Gene DKC1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-208ENST00000475423 NISCHQ9Y2I1 1504 aa41.39■■■■■ 4.22
DKC1-208ENST00000475423 CCDC180Q9P1Z9 1646 aa37.1■■■■□ 3.53
DKC1-208ENST00000475423 ABCC9O60706 1549 aa37.05■■■■□ 3.52
DKC1-208ENST00000475423 RB1CC1Q8TDY2 1594 aa35.3■■■■□ 3.24
DKC1-208ENST00000475423 NACADO15069 1562 aa35.09■■■■□ 3.21
DKC1-208ENST00000475423 DCAF8L2P0C7V8 631 aa34.86■■■■□ 3.17
DKC1-208ENST00000475423 DNAJC5BQ9UF47 199 aa34.8■■■■□ 3.16
DKC1-208ENST00000475423 MYO15BQ96JP2 1530 aa34.66■■■■□ 3.14
DKC1-208ENST00000475423 PABPN1Q86U42 306 aaKnown RBP eCLIP34.52■■■■□ 3.12
DKC1-208ENST00000475423 UNC13AQ9UPW8 1703 aa34.51■■■■□ 3.12
DKC1-208ENST00000475423 BICRAQ9NZM4 1560 aa34.3■■■■□ 3.08
DKC1-208ENST00000475423 ZCCHC6Q5VYS8 1495 aaKnown RBP34.29■■■■□ 3.08
DKC1-208ENST00000475423 DCAF1Q9Y4B6 1507 aa34.22■■■■□ 3.07
DKC1-208ENST00000475423 SHROOM4Q9ULL8 1493 aa33.85■■■■□ 3.01
DKC1-208ENST00000475423 SCRIBQ14160 1630 aa33.76■■■■□ 3
DKC1-208ENST00000475423 CC2D2AQ9P2K1 1620 aa33.49■■■□□ 2.95
DKC1-208ENST00000475423 EIF4G1Q04637 1599 aaKnown RBP33.44■■■□□ 2.94
DKC1-208ENST00000475423 CECR2Q9BXF3 1484 aa33.39■■■□□ 2.94
DKC1-208ENST00000475423 NCAPD3P42695 1498 aa32.42■■■□□ 2.78
DKC1-208ENST00000475423 ATAD2BQ9ULI0 1458 aa32.3■■■□□ 2.76
DKC1-208ENST00000475423 SMARCA4P51532 1647 aa32.26■■■□□ 2.75
DKC1-208ENST00000475423 SMARCA2P51531 1590 aa32.19■■■□□ 2.74
DKC1-208ENST00000475423 HMGXB3Q12766 1538 aa32.15■■■□□ 2.74
DKC1-208ENST00000475423 BAZ1AQ9NRL2 1556 aaPredicted RBP32.11■■■□□ 2.73
DKC1-208ENST00000475423 PEG3Q9GZU2 1588 aa31.98■■■□□ 2.71
DKC1-208ENST00000475423 ERCC6Q03468 1493 aa31.97■■■□□ 2.71
DKC1-208ENST00000475423 BAZ1BQ9UIG0 1483 aaKnown RBP31.96■■■□□ 2.71
DKC1-208ENST00000475423 CUX2O14529 1486 aa31.95■■■□□ 2.7
DKC1-208ENST00000475423 DNAJC5Q9H3Z4 198 aa31.94■■■□□ 2.7
DKC1-208ENST00000475423 MROH2BQ7Z745 1585 aa31.87■■■□□ 2.69
DKC1-208ENST00000475423 NESP48681 1621 aa31.85■■■□□ 2.69
DKC1-208ENST00000475423 LAMC3Q9Y6N6 1575 aa31.65■■■□□ 2.66
DKC1-208ENST00000475423 THOC2Q8NI27 1593 aaKnown RBP31.52■■■□□ 2.64
DKC1-208ENST00000475423 WIZO95785 1651 aa31.48■■■□□ 2.63
DKC1-208ENST00000475423 PDS5BQ9NTI5 1447 aa31.47■■■□□ 2.63
DKC1-208ENST00000475423 KIF21AQ7Z4S6 1674 aa31.42■■■□□ 2.62
DKC1-208ENST00000475423 CADPSQ9ULU8 1353 aa31.42■■■□□ 2.62
DKC1-208ENST00000475423 RSF1Q96T23 1441 aaPredicted RBP31.24■■■□□ 2.59
DKC1-208ENST00000475423 MRC2Q9UBG0 1479 aa31.18■■■□□ 2.58
DKC1-208ENST00000475423 WDR62O43379 1518 aa31.12■■■□□ 2.57
DKC1-208ENST00000475423 TOP2AP11388 1531 aaKnown RBP31.08■■■□□ 2.57
DKC1-208ENST00000475423 CFTRP13569 1480 aa31.08■■■□□ 2.57
DKC1-208ENST00000475423 CEP164Q9UPV0 1460 aa31.06■■■□□ 2.56
DKC1-208ENST00000475423 FANCD2Q9BXW9 1451 aa31.04■■■□□ 2.56
DKC1-208ENST00000475423 URB2Q14146 1524 aaKnown RBP30.78■■■□□ 2.52
DKC1-208ENST00000475423 CCDC88BA6NC98 1476 aa30.76■■■□□ 2.51
DKC1-208ENST00000475423 PRDM2Q13029 1718 aa30.72■■■□□ 2.51
DKC1-208ENST00000475423 OSCARQ8IYS5 282 aa30.51■■■□□ 2.47
DKC1-208ENST00000475423 TRIM41Q8WV44 630 aa30.46■■■□□ 2.47
DKC1-208ENST00000475423 TOPBP1Q92547 1522 aa30.46■■■□□ 2.47
DKC1-208ENST00000475423 IFT140Q96RY7 1462 aa30.45■■■□□ 2.47
DKC1-208ENST00000475423 ABCC8Q09428 1581 aa30.42■■■□□ 2.46
DKC1-208ENST00000475423 ZNF608Q9ULD9 1512 aaPredicted RBP30.39■■■□□ 2.46
DKC1-208ENST00000475423 DNMBPQ6XZF7 1577 aa30.34■■■□□ 2.45
DKC1-208ENST00000475423 EIF4G3O43432 1585 aaKnown RBP30.21■■■□□ 2.43
DKC1-208ENST00000475423 TARBP1Q13395 1621 aaKnown RBP30.2■■■□□ 2.43
DKC1-208ENST00000475423 POLA1P09884 1462 aaPredicted RBP30.15■■■□□ 2.42
DKC1-208ENST00000475423 AQRO60306 1485 aaKnown RBP eCLIP30.12■■■□□ 2.411e-20■■■■□ 25.3
DKC1-208ENST00000475423 RIMBP3CA6NJZ7 1639 aa30.07■■■□□ 2.4
DKC1-208ENST00000475423 RIMBP3BA6NNM3 1639 aa30.07■■■□□ 2.4
DKC1-208ENST00000475423 RIMBP3Q9UFD9 1639 aa30.07■■■□□ 2.4
DKC1-208ENST00000475423 RAD54L2Q9Y4B4 1467 aa30.03■■■□□ 2.4
DKC1-208ENST00000475423 SOGA1O94964 1423 aa30.02■■■□□ 2.4
DKC1-208ENST00000475423 ARHGEF11O15085 1522 aa30■■■□□ 2.39
DKC1-208ENST00000475423 CHD1O14646 1710 aa29.97■■■□□ 2.39
DKC1-208ENST00000475423 FGD5Q6ZNL6 1462 aa29.95■■■□□ 2.39
DKC1-208ENST00000475423 TDRD9Q8NDG6 1382 aaKnown RBP29.94■■■□□ 2.38
DKC1-208ENST00000475423 CUX1P39880 1505 aa29.94■■■□□ 2.38
DKC1-208ENST00000475423 WDR97A6NE52 1622 aa29.89■■■□□ 2.38
DKC1-208ENST00000475423 FBLN2P98095 1184 aa29.88■■■□□ 2.37
DKC1-208ENST00000475423 SUPT5HO00267 1087 aaKnown RBP29.82■■■□□ 2.36
DKC1-208ENST00000475423 SNAPC4Q5SXM2 1469 aa29.8■■■□□ 2.36
DKC1-208ENST00000475423 CYB5RLQ6IPT4 315 aa29.78■■■□□ 2.36
DKC1-208ENST00000475423 MAGI1Q96QZ7 1491 aaPredicted RBP29.75■■■□□ 2.35
DKC1-208ENST00000475423 GRIN2BQ13224 1484 aa29.74■■■□□ 2.35
DKC1-208ENST00000475423 ARAP1Q96P48 1450 aa29.7■■■□□ 2.35
DKC1-208ENST00000475423 CHMP7Q8WUX9 453 aaPredicted RBP29.7■■■□□ 2.35
DKC1-208ENST00000475423 CLASP1Q7Z460 1538 aa29.67■■■□□ 2.34
DKC1-208ENST00000475423 SYNJ2O15056 1496 aa29.65■■■□□ 2.34
DKC1-208ENST00000475423 GAPVD1Q14C86 1478 aa29.65■■■□□ 2.34
DKC1-208ENST00000475423 ABCA10Q8WWZ4 1543 aa29.64■■■□□ 2.34
DKC1-208ENST00000475423 AEBP2Q6ZN18 517 aaPredicted RBP29.63■■■□□ 2.33
DKC1-208ENST00000475423 SYNJ1O43426 1573 aa29.63■■■□□ 2.33
DKC1-208ENST00000475423 PBRM1Q86U86 1689 aa29.6■■■□□ 2.33
DKC1-208ENST00000475423 ABCA5Q8WWZ7 1642 aa29.58■■■□□ 2.33
DKC1-208ENST00000475423 WRNQ14191 1432 aaPredicted RBP eCLIP29.52■■■□□ 2.32
DKC1-208ENST00000475423 TOP2BQ02880 1626 aa29.47■■■□□ 2.31
DKC1-208ENST00000475423 BIVM-ERCC5R4GMW8 1640 aa29.47■■■□□ 2.31
DKC1-208ENST00000475423 TRHP20396 242 aaPredicted RBP29.4■■■□□ 2.3
DKC1-208ENST00000475423 GRIN2AQ12879 1464 aa29.37■■■□□ 2.29
DKC1-208ENST00000475423 ADAMTS12P58397 1594 aa29.34■■■□□ 2.29
DKC1-208ENST00000475423 FHAD1B1AJZ9 1412 aa29.28■■■□□ 2.28
DKC1-208ENST00000475423 NUP160Q12769 1436 aa29.28■■■□□ 2.28
DKC1-208ENST00000475423 ERICH3Q5RHP9 1530 aa29.26■■■□□ 2.27
DKC1-208ENST00000475423 CEP170Q5SW79 1584 aa29.25■■■□□ 2.27
DKC1-208ENST00000475423 ERCC6L2Q5T890 1561 aa29.19■■■□□ 2.26
DKC1-208ENST00000475423 SHROOM2Q13796 1616 aa29.15■■■□□ 2.26
DKC1-208ENST00000475423 JPH4Q96JJ6 628 aa29■■■□□ 2.23
DKC1-208ENST00000475423 PRG4Q92954 1404 aaPredicted RBP28.98■■■□□ 2.23
DKC1-208ENST00000475423 IGF1RP08069 1367 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms