RNA–Protein interactions for RNA: ENST00000532392.1

CTSB-224, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-224ENST00000532392 NISCHQ9Y2I1 1504 aa35.29■■■■□ 3.24
CTSB-224ENST00000532392 CCDC180Q9P1Z9 1646 aa31.34■■■□□ 2.61
CTSB-224ENST00000532392 ABCC9O60706 1549 aa30.78■■■□□ 2.52
CTSB-224ENST00000532392 DCAF8L2P0C7V8 631 aa29.58■■■□□ 2.33
CTSB-224ENST00000532392 RB1CC1Q8TDY2 1594 aa29.56■■■□□ 2.32
CTSB-224ENST00000532392 NACADO15069 1562 aa29.52■■■□□ 2.32
CTSB-224ENST00000532392 ZCCHC6Q5VYS8 1495 aaKnown RBP29.37■■■□□ 2.29
CTSB-224ENST00000532392 MYO15BQ96JP2 1530 aa29.35■■■□□ 2.29
CTSB-224ENST00000532392 DCAF1Q9Y4B6 1507 aa29.19■■■□□ 2.26
CTSB-224ENST00000532392 UNC13AQ9UPW8 1703 aa28.83■■■□□ 2.21
CTSB-224ENST00000532392 PABPN1Q86U42 306 aaKnown RBP eCLIP28.8■■■□□ 2.2
CTSB-224ENST00000532392 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
CTSB-224ENST00000532392 SCRIBQ14160 1630 aa28.61■■■□□ 2.17
CTSB-224ENST00000532392 SHROOM4Q9ULL8 1493 aa28.37■■■□□ 2.13
CTSB-224ENST00000532392 DNAJC5BQ9UF47 199 aa28.35■■■□□ 2.13
CTSB-224ENST00000532392 EIF4G1Q04637 1599 aaKnown RBP27.92■■■□□ 2.06
CTSB-224ENST00000532392 CC2D2AQ9P2K1 1620 aa27.81■■■□□ 2.04
CTSB-224ENST00000532392 CECR2Q9BXF3 1484 aa27.67■■■□□ 2.02
CTSB-224ENST00000532392 SMARCA4P51532 1647 aa27.36■■□□□ 1.97
CTSB-224ENST00000532392 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
CTSB-224ENST00000532392 NCAPD3P42695 1498 aa27.27■■□□□ 1.96
CTSB-224ENST00000532392 ATAD2BQ9ULI0 1458 aa27.27■■□□□ 1.96
CTSB-224ENST00000532392 SMARCA2P51531 1590 aa27.22■■□□□ 1.95
CTSB-224ENST00000532392 MROH2BQ7Z745 1585 aa27.19■■□□□ 1.94
CTSB-224ENST00000532392 PEG3Q9GZU2 1588 aa27.1■■□□□ 1.93
CTSB-224ENST00000532392 HMGXB3Q12766 1538 aa27.09■■□□□ 1.93
CTSB-224ENST00000532392 BAZ1BQ9UIG0 1483 aaKnown RBP27.03■■□□□ 1.92
CTSB-224ENST00000532392 RSF1Q96T23 1441 aaPredicted RBP26.89■■□□□ 1.89
CTSB-224ENST00000532392 WIZO95785 1651 aa26.87■■□□□ 1.89
CTSB-224ENST00000532392 NESP48681 1621 aa26.61■■□□□ 1.85
CTSB-224ENST00000532392 TOP2AP11388 1531 aaKnown RBP26.6■■□□□ 1.85
CTSB-224ENST00000532392 ERCC6Q03468 1493 aa26.54■■□□□ 1.84
CTSB-224ENST00000532392 LAMC3Q9Y6N6 1575 aa26.53■■□□□ 1.84
CTSB-224ENST00000532392 CADPSQ9ULU8 1353 aa26.48■■□□□ 1.83
CTSB-224ENST00000532392 PDS5BQ9NTI5 1447 aa26.39■■□□□ 1.82
CTSB-224ENST00000532392 CCDC88BA6NC98 1476 aa26.31■■□□□ 1.8
CTSB-224ENST00000532392 CFTRP13569 1480 aa26.3■■□□□ 1.8
CTSB-224ENST00000532392 CUX2O14529 1486 aa26.27■■□□□ 1.8
CTSB-224ENST00000532392 KIF21AQ7Z4S6 1674 aa26.24■■□□□ 1.79
CTSB-224ENST00000532392 SUPT5HO00267 1087 aaKnown RBP26.2■■□□□ 1.78
CTSB-224ENST00000532392 THOC2Q8NI27 1593 aaKnown RBP26.18■■□□□ 1.78
CTSB-224ENST00000532392 FANCD2Q9BXW9 1451 aa26.16■■□□□ 1.78
CTSB-224ENST00000532392 CEP164Q9UPV0 1460 aa26.12■■□□□ 1.77
CTSB-224ENST00000532392 MRC2Q9UBG0 1479 aa26.1■■□□□ 1.77
CTSB-224ENST00000532392 PRDM2Q13029 1718 aa26■■□□□ 1.75
CTSB-224ENST00000532392 WDR62O43379 1518 aa25.99■■□□□ 1.75
CTSB-224ENST00000532392 URB2Q14146 1524 aaKnown RBP25.89■■□□□ 1.74
CTSB-224ENST00000532392 ABCC8Q09428 1581 aa25.74■■□□□ 1.71
CTSB-224ENST00000532392 TOPBP1Q92547 1522 aa25.73■■□□□ 1.71
CTSB-224ENST00000532392 DNMBPQ6XZF7 1577 aa25.67■■□□□ 1.7
CTSB-224ENST00000532392 IFT140Q96RY7 1462 aa25.6■■□□□ 1.69
CTSB-224ENST00000532392 DNAJC5Q9H3Z4 198 aa25.59■■□□□ 1.69
CTSB-224ENST00000532392 POLA1P09884 1462 aaPredicted RBP25.51■■□□□ 1.67
CTSB-224ENST00000532392 CUX1P39880 1505 aa25.51■■□□□ 1.67
CTSB-224ENST00000532392 ZNF608Q9ULD9 1512 aaPredicted RBP25.47■■□□□ 1.67
CTSB-224ENST00000532392 SOGA1O94964 1423 aa25.44■■□□□ 1.66
CTSB-224ENST00000532392 FGD5Q6ZNL6 1462 aa25.43■■□□□ 1.66
CTSB-224ENST00000532392 TARBP1Q13395 1621 aaKnown RBP25.43■■□□□ 1.66
CTSB-224ENST00000532392 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
CTSB-224ENST00000532392 WRNQ14191 1432 aaPredicted RBP eCLIP25.35■■□□□ 1.65
CTSB-224ENST00000532392 AQRO60306 1485 aaKnown RBP eCLIP25.34■■□□□ 1.652e-10■■■■■ 44.2
CTSB-224ENST00000532392 EIF4G3O43432 1585 aaKnown RBP25.33■■□□□ 1.65
CTSB-224ENST00000532392 TDRD9Q8NDG6 1382 aaKnown RBP25.3■■□□□ 1.64
CTSB-224ENST00000532392 TOP2BQ02880 1626 aa25.26■■□□□ 1.63
CTSB-224ENST00000532392 BIVM-ERCC5R4GMW8 1640 aa25.24■■□□□ 1.63
CTSB-224ENST00000532392 SYNJ1O43426 1573 aa25.24■■□□□ 1.63
CTSB-224ENST00000532392 OSCARQ8IYS5 282 aa25.24■■□□□ 1.63
CTSB-224ENST00000532392 WDR97A6NE52 1622 aa25.22■■□□□ 1.63
CTSB-224ENST00000532392 ABCA10Q8WWZ4 1543 aa25.19■■□□□ 1.62
CTSB-224ENST00000532392 GRIN2BQ13224 1484 aa25.12■■□□□ 1.61
CTSB-224ENST00000532392 GAPVD1Q14C86 1478 aa25.12■■□□□ 1.61
CTSB-224ENST00000532392 SNAPC4Q5SXM2 1469 aa25.09■■□□□ 1.61
CTSB-224ENST00000532392 FBLN2P98095 1184 aa25.08■■□□□ 1.61
CTSB-224ENST00000532392 MAGI1Q96QZ7 1491 aaPredicted RBP25.06■■□□□ 1.6
CTSB-224ENST00000532392 ABCA5Q8WWZ7 1642 aa25.05■■□□□ 1.6
CTSB-224ENST00000532392 CHMP7Q8WUX9 453 aaPredicted RBP25.01■■□□□ 1.59
CTSB-224ENST00000532392 CHD1O14646 1710 aa25■■□□□ 1.59
CTSB-224ENST00000532392 PBRM1Q86U86 1689 aa24.99■■□□□ 1.59
CTSB-224ENST00000532392 SYNJ2O15056 1496 aa24.96■■□□□ 1.59
CTSB-224ENST00000532392 ERICH3Q5RHP9 1530 aa24.88■■□□□ 1.57
CTSB-224ENST00000532392 FHAD1B1AJZ9 1412 aa24.84■■□□□ 1.57
CTSB-224ENST00000532392 KIF27Q86VH2 1401 aa24.83■■□□□ 1.57
CTSB-224ENST00000532392 ADAMTS12P58397 1594 aa24.82■■□□□ 1.56
CTSB-224ENST00000532392 GRIN2AQ12879 1464 aa24.79■■□□□ 1.56
CTSB-224ENST00000532392 CLASP1Q7Z460 1538 aa24.76■■□□□ 1.55
CTSB-224ENST00000532392 IGF1RP08069 1367 aa24.76■■□□□ 1.55
CTSB-224ENST00000532392 ARHGEF11O15085 1522 aa24.76■■□□□ 1.55
CTSB-224ENST00000532392 TRIM41Q8WV44 630 aa24.75■■□□□ 1.55
CTSB-224ENST00000532392 RIMBP3CA6NJZ7 1639 aa24.75■■□□□ 1.55
CTSB-224ENST00000532392 RIMBP3BA6NNM3 1639 aa24.75■■□□□ 1.55
CTSB-224ENST00000532392 RIMBP3Q9UFD9 1639 aa24.75■■□□□ 1.55
CTSB-224ENST00000532392 NUP160Q12769 1436 aa24.69■■□□□ 1.54
CTSB-224ENST00000532392 CEP170Q5SW79 1584 aa24.65■■□□□ 1.54
CTSB-224ENST00000532392 CUL7Q14999 1698 aa24.62■■□□□ 1.53
CTSB-224ENST00000532392 CARMIL1Q5VZK9 1371 aa24.6■■□□□ 1.53
CTSB-224ENST00000532392 CYB5RLQ6IPT4 315 aa24.6■■□□□ 1.53
CTSB-224ENST00000532392 RUSC2Q8N2Y8 1516 aa24.58■■□□□ 1.53
CTSB-224ENST00000532392 ARAP1Q96P48 1450 aa24.56■■□□□ 1.52
CTSB-224ENST00000532392 JPH4Q96JJ6 628 aa24.49■■□□□ 1.51
CTSB-224ENST00000532392 SHROOM2Q13796 1616 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms