RNA–Protein interactions for RNA: ENST00000492234.5

AGAP3-223, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 4

Gene AGAP3, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-223ENST00000492234 NISCHQ9Y2I1 1504 aa31.33■■■□□ 2.61
AGAP3-223ENST00000492234 CCDC180Q9P1Z9 1646 aa27.69■■■□□ 2.02
AGAP3-223ENST00000492234 ABCC9O60706 1549 aa27.06■■□□□ 1.92
AGAP3-223ENST00000492234 DCAF8L2P0C7V8 631 aa26.37■■□□□ 1.81
AGAP3-223ENST00000492234 ZCCHC6Q5VYS8 1495 aaKnown RBP26.09■■□□□ 1.77
AGAP3-223ENST00000492234 RB1CC1Q8TDY2 1594 aa26.05■■□□□ 1.76
AGAP3-223ENST00000492234 NACADO15069 1562 aa26.04■■□□□ 1.76
AGAP3-223ENST00000492234 MYO15BQ96JP2 1530 aa25.88■■□□□ 1.73
AGAP3-223ENST00000492234 DCAF1Q9Y4B6 1507 aa25.86■■□□□ 1.73
AGAP3-223ENST00000492234 UNC13AQ9UPW8 1703 aa25.43■■□□□ 1.66
AGAP3-223ENST00000492234 PABPN1Q86U42 306 aaKnown RBP eCLIP25.41■■□□□ 1.66
AGAP3-223ENST00000492234 SCRIBQ14160 1630 aa25.39■■□□□ 1.66
AGAP3-223ENST00000492234 BICRAQ9NZM4 1560 aa25.21■■□□□ 1.63
AGAP3-223ENST00000492234 SHROOM4Q9ULL8 1493 aa25.03■■□□□ 1.6
AGAP3-223ENST00000492234 DNAJC5BQ9UF47 199 aa24.7■■□□□ 1.54
AGAP3-223ENST00000492234 EIF4G1Q04637 1599 aaKnown RBP24.56■■□□□ 1.52
AGAP3-223ENST00000492234 CC2D2AQ9P2K1 1620 aa24.44■■□□□ 1.5
AGAP3-223ENST00000492234 CECR2Q9BXF3 1484 aa24.42■■□□□ 1.5
AGAP3-223ENST00000492234 BAZ1AQ9NRL2 1556 aaPredicted RBP24.26■■□□□ 1.47
AGAP3-223ENST00000492234 SMARCA4P51532 1647 aa24.25■■□□□ 1.47
AGAP3-223ENST00000492234 MROH2BQ7Z745 1585 aa24.16■■□□□ 1.46
AGAP3-223ENST00000492234 ATAD2BQ9ULI0 1458 aa24.1■■□□□ 1.45
AGAP3-223ENST00000492234 SMARCA2P51531 1590 aa24.07■■□□□ 1.44
AGAP3-223ENST00000492234 NCAPD3P42695 1498 aa24.04■■□□□ 1.44
AGAP3-223ENST00000492234 RSF1Q96T23 1441 aaPredicted RBP23.97■■□□□ 1.43
AGAP3-223ENST00000492234 PEG3Q9GZU2 1588 aa23.95■■□□□ 1.43
AGAP3-223ENST00000492234 BAZ1BQ9UIG0 1483 aaKnown RBP23.94■■□□□ 1.42
AGAP3-223ENST00000492234 WIZO95785 1651 aa23.92■■□□□ 1.42
AGAP3-223ENST00000492234 HMGXB3Q12766 1538 aa23.89■■□□□ 1.42
AGAP3-223ENST00000492234 SUPT5HO00267 1087 aaKnown RBP23.7■■□□□ 1.38
AGAP3-223ENST00000492234 TOP2AP11388 1531 aaKnown RBP23.64■■□□□ 1.37
AGAP3-223ENST00000492234 NESP48681 1621 aa23.46■■□□□ 1.35
AGAP3-223ENST00000492234 CCDC88BA6NC98 1476 aa23.43■■□□□ 1.34
AGAP3-223ENST00000492234 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
AGAP3-223ENST00000492234 LAMC3Q9Y6N6 1575 aa23.36■■□□□ 1.33
AGAP3-223ENST00000492234 ERCC6Q03468 1493 aa23.33■■□□□ 1.33
AGAP3-223ENST00000492234 PDS5BQ9NTI5 1447 aa23.27■■□□□ 1.32
AGAP3-223ENST00000492234 CFTRP13569 1480 aa23.25■■□□□ 1.31
AGAP3-223ENST00000492234 KIF21AQ7Z4S6 1674 aa23.14■■□□□ 1.29
AGAP3-223ENST00000492234 FANCD2Q9BXW9 1451 aa23.13■■□□□ 1.29
AGAP3-223ENST00000492234 CEP164Q9UPV0 1460 aa23.07■■□□□ 1.28
AGAP3-223ENST00000492234 PRDM2Q13029 1718 aa23.05■■□□□ 1.28
AGAP3-223ENST00000492234 MRC2Q9UBG0 1479 aa22.98■■□□□ 1.27
AGAP3-223ENST00000492234 THOC2Q8NI27 1593 aaKnown RBP22.97■■□□□ 1.27
AGAP3-223ENST00000492234 CUX2O14529 1486 aa22.92■■□□□ 1.26
AGAP3-223ENST00000492234 URB2Q14146 1524 aaKnown RBP22.86■■□□□ 1.25
AGAP3-223ENST00000492234 WDR62O43379 1518 aa22.85■■□□□ 1.25
AGAP3-223ENST00000492234 ABCC8Q09428 1581 aa22.77■■□□□ 1.24
AGAP3-223ENST00000492234 TOPBP1Q92547 1522 aa22.76■■□□□ 1.23
AGAP3-223ENST00000492234 DNMBPQ6XZF7 1577 aa22.72■■□□□ 1.23
AGAP3-223ENST00000492234 CUX1P39880 1505 aa22.65■■□□□ 1.22
AGAP3-223ENST00000492234 WRNQ14191 1432 aaPredicted RBP eCLIP22.61■■□□□ 1.21
AGAP3-223ENST00000492234 POLA1P09884 1462 aaPredicted RBP22.57■■□□□ 1.2
AGAP3-223ENST00000492234 IFT140Q96RY7 1462 aa22.57■■□□□ 1.2
AGAP3-223ENST00000492234 FGD5Q6ZNL6 1462 aa22.56■■□□□ 1.2
AGAP3-223ENST00000492234 SOGA1O94964 1423 aa22.56■■□□□ 1.2
AGAP3-223ENST00000492234 RAD54L2Q9Y4B4 1467 aa22.53■■□□□ 1.2
AGAP3-223ENST00000492234 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
AGAP3-223ENST00000492234 TOP2BQ02880 1626 aa22.49■■□□□ 1.19
AGAP3-223ENST00000492234 ZNF608Q9ULD9 1512 aaPredicted RBP22.47■■□□□ 1.19
AGAP3-223ENST00000492234 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
AGAP3-223ENST00000492234 TARBP1Q13395 1621 aaKnown RBP22.45■■□□□ 1.18
AGAP3-223ENST00000492234 TDRD9Q8NDG6 1382 aaKnown RBP22.42■■□□□ 1.18
AGAP3-223ENST00000492234 AQRO60306 1485 aaKnown RBP eCLIP22.41■■□□□ 1.182e-7■■■■□ 23.6
AGAP3-223ENST00000492234 TRIM41Q8WV44 630 aa22.34■■□□□ 1.17
AGAP3-223ENST00000492234 EIF4G3O43432 1585 aaKnown RBP22.33■■□□□ 1.17
AGAP3-223ENST00000492234 ABCA10Q8WWZ4 1543 aa22.32■■□□□ 1.16
AGAP3-223ENST00000492234 WDR97A6NE52 1622 aa22.27■■□□□ 1.16
AGAP3-223ENST00000492234 GAPVD1Q14C86 1478 aa22.27■■□□□ 1.16
AGAP3-223ENST00000492234 FBLN2P98095 1184 aa22.23■■□□□ 1.15
AGAP3-223ENST00000492234 GRIN2BQ13224 1484 aa22.22■■□□□ 1.15
AGAP3-223ENST00000492234 ABCA5Q8WWZ7 1642 aa22.17■■□□□ 1.14
AGAP3-223ENST00000492234 SNAPC4Q5SXM2 1469 aa22.17■■□□□ 1.14
AGAP3-223ENST00000492234 CHIC1Q5VXU3 224 aa22.16■■□□□ 1.14
AGAP3-223ENST00000492234 PBRM1Q86U86 1689 aa22.15■■□□□ 1.14
AGAP3-223ENST00000492234 OSCARQ8IYS5 282 aa22.15■■□□□ 1.14
AGAP3-223ENST00000492234 CHMP7Q8WUX9 453 aaPredicted RBP22.15■■□□□ 1.14
AGAP3-223ENST00000492234 KIF27Q86VH2 1401 aa22.14■■□□□ 1.13
AGAP3-223ENST00000492234 MAGI1Q96QZ7 1491 aaPredicted RBP22.11■■□□□ 1.13
AGAP3-223ENST00000492234 DNAJC5Q9H3Z4 198 aa22.1■■□□□ 1.13
AGAP3-223ENST00000492234 ERICH3Q5RHP9 1530 aa22.06■■□□□ 1.12
AGAP3-223ENST00000492234 CHD1O14646 1710 aa22.05■■□□□ 1.12
AGAP3-223ENST00000492234 IGF1RP08069 1367 aa22.04■■□□□ 1.12
AGAP3-223ENST00000492234 SYNJ2O15056 1496 aa22.03■■□□□ 1.12
AGAP3-223ENST00000492234 RUSC2Q8N2Y8 1516 aa22.01■■□□□ 1.11
AGAP3-223ENST00000492234 FHAD1B1AJZ9 1412 aa22■■□□□ 1.11
AGAP3-223ENST00000492234 ADAMTS12P58397 1594 aa21.97■■□□□ 1.11
AGAP3-223ENST00000492234 CARMIL1Q5VZK9 1371 aa21.93■■□□□ 1.1
AGAP3-223ENST00000492234 FAM9AQ8IZU1 332 aaPredicted RBP21.93■■□□□ 1.1
AGAP3-223ENST00000492234 GRIN2AQ12879 1464 aa21.91■■□□□ 1.1
AGAP3-223ENST00000492234 CUL7Q14999 1698 aa21.88■■□□□ 1.09
AGAP3-223ENST00000492234 CSRNP3Q8WYN3 585 aa21.87■■□□□ 1.09
AGAP3-223ENST00000492234 EEA1Q15075 1411 aa21.81■■□□□ 1.08
AGAP3-223ENST00000492234 RAPGEF2Q9Y4G8 1499 aa21.79■■□□□ 1.08
AGAP3-223ENST00000492234 NUP160Q12769 1436 aa21.79■■□□□ 1.08
AGAP3-223ENST00000492234 CEP170Q5SW79 1584 aa21.78■■□□□ 1.08
AGAP3-223ENST00000492234 CLASP1Q7Z460 1538 aa21.76■■□□□ 1.07
AGAP3-223ENST00000492234 JPH4Q96JJ6 628 aa21.71■■□□□ 1.07
AGAP3-223ENST00000492234 PRXQ9BXM0 1461 aa21.71■■□□□ 1.07
AGAP3-223ENST00000492234 EHMT2Q96KQ7 1210 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms