RNA–Protein interactions for RNA: ENST00000477108.5

HNRNPF-205, Transcript of heterogeneous nuclear ribonucleoprotein F, humanhuman

TSL 1 (best)

Gene HNRNPF, Length 636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPF-205ENST00000477108 NISCHQ9Y2I1 1504 aa37.56■■■■□ 3.6
HNRNPF-205ENST00000477108 CCDC180Q9P1Z9 1646 aa33.41■■■□□ 2.94
HNRNPF-205ENST00000477108 ABCC9O60706 1549 aa32.52■■■□□ 2.8
HNRNPF-205ENST00000477108 RB1CC1Q8TDY2 1594 aa31.36■■■□□ 2.61
HNRNPF-205ENST00000477108 NACADO15069 1562 aa31.35■■■□□ 2.61
HNRNPF-205ENST00000477108 ZCCHC6Q5VYS8 1495 aaKnown RBP31.33■■■□□ 2.61
HNRNPF-205ENST00000477108 MYO15BQ96JP2 1530 aa31.22■■■□□ 2.59
HNRNPF-205ENST00000477108 DCAF8L2P0C7V8 631 aa31.2■■■□□ 2.59
HNRNPF-205ENST00000477108 DCAF1Q9Y4B6 1507 aa31.12■■■□□ 2.57
HNRNPF-205ENST00000477108 UNC13AQ9UPW8 1703 aa30.71■■■□□ 2.51
HNRNPF-205ENST00000477108 BICRAQ9NZM4 1560 aa30.45■■■□□ 2.46
HNRNPF-205ENST00000477108 SCRIBQ14160 1630 aa30.44■■■□□ 2.46
HNRNPF-205ENST00000477108 PABPN1Q86U42 306 aaKnown RBP eCLIP30.36■■■□□ 2.45
HNRNPF-205ENST00000477108 SHROOM4Q9ULL8 1493 aa30.13■■■□□ 2.41
HNRNPF-205ENST00000477108 DNAJC5BQ9UF47 199 aa30.11■■■□□ 2.41
HNRNPF-205ENST00000477108 EIF4G1Q04637 1599 aaKnown RBP29.6■■■□□ 2.33
HNRNPF-205ENST00000477108 CC2D2AQ9P2K1 1620 aa29.46■■■□□ 2.31
HNRNPF-205ENST00000477108 CECR2Q9BXF3 1484 aa29.23■■■□□ 2.27
HNRNPF-205ENST00000477108 SMARCA4P51532 1647 aa29.15■■■□□ 2.26
HNRNPF-205ENST00000477108 BAZ1AQ9NRL2 1556 aaPredicted RBP29.1■■■□□ 2.25
HNRNPF-205ENST00000477108 MROH2BQ7Z745 1585 aa28.95■■■□□ 2.22
HNRNPF-205ENST00000477108 ATAD2BQ9ULI0 1458 aa28.94■■■□□ 2.22
HNRNPF-205ENST00000477108 SMARCA2P51531 1590 aa28.92■■■□□ 2.22
HNRNPF-205ENST00000477108 NCAPD3P42695 1498 aa28.92■■■□□ 2.22
HNRNPF-205ENST00000477108 PEG3Q9GZU2 1588 aa28.88■■■□□ 2.21
HNRNPF-205ENST00000477108 HMGXB3Q12766 1538 aa28.81■■■□□ 2.2
HNRNPF-205ENST00000477108 BAZ1BQ9UIG0 1483 aaKnown RBP28.69■■■□□ 2.18
HNRNPF-205ENST00000477108 WIZO95785 1651 aa28.64■■■□□ 2.18
HNRNPF-205ENST00000477108 RSF1Q96T23 1441 aaPredicted RBP28.63■■■□□ 2.17
HNRNPF-205ENST00000477108 TOP2AP11388 1531 aaKnown RBP28.35■■■□□ 2.13
HNRNPF-205ENST00000477108 NESP48681 1621 aa28.18■■■□□ 2.1
HNRNPF-205ENST00000477108 LAMC3Q9Y6N6 1575 aa28.16■■■□□ 2.1
HNRNPF-205ENST00000477108 CADPSQ9ULU8 1353 aa28.05■■■□□ 2.08
HNRNPF-205ENST00000477108 ERCC6Q03468 1493 aa28.02■■■□□ 2.08
HNRNPF-205ENST00000477108 CCDC88BA6NC98 1476 aa27.99■■■□□ 2.07
HNRNPF-205ENST00000477108 CFTRP13569 1480 aa27.93■■■□□ 2.06
HNRNPF-205ENST00000477108 PDS5BQ9NTI5 1447 aa27.92■■■□□ 2.06
HNRNPF-205ENST00000477108 KIF21AQ7Z4S6 1674 aa27.9■■■□□ 2.06
HNRNPF-205ENST00000477108 CUX2O14529 1486 aa27.88■■■□□ 2.05
HNRNPF-205ENST00000477108 SUPT5HO00267 1087 aaKnown RBP27.87■■■□□ 2.05
HNRNPF-205ENST00000477108 PRDM2Q13029 1718 aa27.79■■■□□ 2.04
HNRNPF-205ENST00000477108 THOC2Q8NI27 1593 aaKnown RBP27.79■■■□□ 2.04
HNRNPF-205ENST00000477108 FANCD2Q9BXW9 1451 aa27.74■■■□□ 2.03
HNRNPF-205ENST00000477108 CEP164Q9UPV0 1460 aa27.7■■■□□ 2.03
HNRNPF-205ENST00000477108 MRC2Q9UBG0 1479 aa27.65■■■□□ 2.02
HNRNPF-205ENST00000477108 WDR62O43379 1518 aa27.58■■■□□ 2.01
HNRNPF-205ENST00000477108 DNAJC5Q9H3Z4 198 aa27.54■■■□□ 2
HNRNPF-205ENST00000477108 URB2Q14146 1524 aaKnown RBP27.48■■□□□ 1.99
HNRNPF-205ENST00000477108 TOPBP1Q92547 1522 aa27.32■■□□□ 1.96
HNRNPF-205ENST00000477108 ABCC8Q09428 1581 aa27.31■■□□□ 1.96
HNRNPF-205ENST00000477108 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
HNRNPF-205ENST00000477108 CUX1P39880 1505 aa27.16■■□□□ 1.94
HNRNPF-205ENST00000477108 IFT140Q96RY7 1462 aa27.13■■□□□ 1.93
HNRNPF-205ENST00000477108 POLA1P09884 1462 aaPredicted RBP27.1■■□□□ 1.93
HNRNPF-205ENST00000477108 TARBP1Q13395 1621 aaKnown RBP27.05■■□□□ 1.92
HNRNPF-205ENST00000477108 FGD5Q6ZNL6 1462 aa27.04■■□□□ 1.92
HNRNPF-205ENST00000477108 ZNF608Q9ULD9 1512 aaPredicted RBP26.99■■□□□ 1.91
HNRNPF-205ENST00000477108 WRNQ14191 1432 aaPredicted RBP eCLIP26.98■■□□□ 1.91
HNRNPF-205ENST00000477108 BIVM-ERCC5R4GMW8 1640 aa26.98■■□□□ 1.91
HNRNPF-205ENST00000477108 RAD54L2Q9Y4B4 1467 aa26.95■■□□□ 1.91
HNRNPF-205ENST00000477108 TOP2BQ02880 1626 aa26.95■■□□□ 1.91
HNRNPF-205ENST00000477108 SOGA1O94964 1423 aa26.95■■□□□ 1.9
HNRNPF-205ENST00000477108 SYNJ1O43426 1573 aa26.95■■□□□ 1.9
HNRNPF-205ENST00000477108 EIF4G3O43432 1585 aaKnown RBP26.92■■□□□ 1.9
HNRNPF-205ENST00000477108 WDR97A6NE52 1622 aa26.87■■□□□ 1.89
HNRNPF-205ENST00000477108 AQRO60306 1485 aaKnown RBP eCLIP26.82■■□□□ 1.887e-7■■■□□ 17.3
HNRNPF-205ENST00000477108 ABCA10Q8WWZ4 1543 aa26.79■■□□□ 1.88
HNRNPF-205ENST00000477108 TDRD9Q8NDG6 1382 aaKnown RBP26.78■■□□□ 1.88
HNRNPF-205ENST00000477108 ABCA5Q8WWZ7 1642 aa26.71■■□□□ 1.87
HNRNPF-205ENST00000477108 OSCARQ8IYS5 282 aa26.66■■□□□ 1.86
HNRNPF-205ENST00000477108 GAPVD1Q14C86 1478 aa26.66■■□□□ 1.86
HNRNPF-205ENST00000477108 GRIN2BQ13224 1484 aa26.65■■□□□ 1.86
HNRNPF-205ENST00000477108 PBRM1Q86U86 1689 aa26.65■■□□□ 1.86
HNRNPF-205ENST00000477108 SNAPC4Q5SXM2 1469 aa26.6■■□□□ 1.85
HNRNPF-205ENST00000477108 MAGI1Q96QZ7 1491 aaPredicted RBP26.59■■□□□ 1.85
HNRNPF-205ENST00000477108 CHD1O14646 1710 aa26.57■■□□□ 1.84
HNRNPF-205ENST00000477108 ERICH3Q5RHP9 1530 aa26.48■■□□□ 1.83
HNRNPF-205ENST00000477108 SYNJ2O15056 1496 aa26.47■■□□□ 1.83
HNRNPF-205ENST00000477108 TRIM41Q8WV44 630 aa26.46■■□□□ 1.83
HNRNPF-205ENST00000477108 ADAMTS12P58397 1594 aa26.44■■□□□ 1.82
HNRNPF-205ENST00000477108 FBLN2P98095 1184 aa26.42■■□□□ 1.82
HNRNPF-205ENST00000477108 KIF27Q86VH2 1401 aa26.4■■□□□ 1.82
HNRNPF-205ENST00000477108 CHMP7Q8WUX9 453 aaPredicted RBP26.38■■□□□ 1.81
HNRNPF-205ENST00000477108 FHAD1B1AJZ9 1412 aa26.36■■□□□ 1.81
HNRNPF-205ENST00000477108 GRIN2AQ12879 1464 aa26.32■■□□□ 1.8
HNRNPF-205ENST00000477108 CLASP1Q7Z460 1538 aa26.29■■□□□ 1.8
HNRNPF-205ENST00000477108 IGF1RP08069 1367 aa26.29■■□□□ 1.8
HNRNPF-205ENST00000477108 RIMBP3CA6NJZ7 1639 aa26.28■■□□□ 1.8
HNRNPF-205ENST00000477108 RIMBP3BA6NNM3 1639 aa26.28■■□□□ 1.8
HNRNPF-205ENST00000477108 RIMBP3Q9UFD9 1639 aa26.28■■□□□ 1.8
HNRNPF-205ENST00000477108 CUL7Q14999 1698 aa26.26■■□□□ 1.79
HNRNPF-205ENST00000477108 NUP160Q12769 1436 aa26.21■■□□□ 1.79
HNRNPF-205ENST00000477108 CEP170Q5SW79 1584 aa26.2■■□□□ 1.79
HNRNPF-205ENST00000477108 RUSC2Q8N2Y8 1516 aa26.2■■□□□ 1.79
HNRNPF-205ENST00000477108 ARHGEF11O15085 1522 aa26.19■■□□□ 1.78
HNRNPF-205ENST00000477108 CARMIL1Q5VZK9 1371 aa26.12■■□□□ 1.77
HNRNPF-205ENST00000477108 CHIC1Q5VXU3 224 aa26.1■■□□□ 1.77
HNRNPF-205ENST00000477108 SHROOM2Q13796 1616 aa26.03■■□□□ 1.76
HNRNPF-205ENST00000477108 CYB5RLQ6IPT4 315 aa26■■□□□ 1.75
HNRNPF-205ENST00000477108 RAPGEF2Q9Y4G8 1499 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms