RNA–Protein interactions for RNA: ENST00000507176.5

PPP3CA-205, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 1,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-205ENST00000507176 NISCHQ9Y2I1 1504 aa22.39■■□□□ 1.18
PPP3CA-205ENST00000507176 ABCC9O60706 1549 aa20.18■□□□□ 0.82
PPP3CA-205ENST00000507176 CCDC180Q9P1Z9 1646 aa20.14■□□□□ 0.81
PPP3CA-205ENST00000507176 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
PPP3CA-205ENST00000507176 NACADO15069 1562 aa19■□□□□ 0.63
PPP3CA-205ENST00000507176 DNAJC5BQ9UF47 199 aa18.95■□□□□ 0.62
PPP3CA-205ENST00000507176 DCAF8L2P0C7V8 631 aa18.84■□□□□ 0.61
PPP3CA-205ENST00000507176 UNC13AQ9UPW8 1703 aa18.84■□□□□ 0.61
PPP3CA-205ENST00000507176 PABPN1Q86U42 306 aaKnown RBP eCLIP18.75■□□□□ 0.59
PPP3CA-205ENST00000507176 MYO15BQ96JP2 1530 aa18.7■□□□□ 0.58
PPP3CA-205ENST00000507176 BICRAQ9NZM4 1560 aa18.67■□□□□ 0.58
PPP3CA-205ENST00000507176 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.56
PPP3CA-205ENST00000507176 DCAF1Q9Y4B6 1507 aa18.46■□□□□ 0.55
PPP3CA-205ENST00000507176 SCRIBQ14160 1630 aa18.39■□□□□ 0.53
PPP3CA-205ENST00000507176 SHROOM4Q9ULL8 1493 aa18.31■□□□□ 0.52
PPP3CA-205ENST00000507176 CC2D2AQ9P2K1 1620 aa18.24■□□□□ 0.51
PPP3CA-205ENST00000507176 EIF4G1Q04637 1599 aaKnown RBP18.18■□□□□ 0.5
PPP3CA-205ENST00000507176 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
PPP3CA-205ENST00000507176 AEBP2Q6ZN18 517 aaPredicted RBP17.93■□□□□ 0.46
PPP3CA-205ENST00000507176 NCAPD3P42695 1498 aa17.53■□□□□ 0.4
PPP3CA-205ENST00000507176 SMARCA4P51532 1647 aa17.52■□□□□ 0.39
PPP3CA-205ENST00000507176 ATAD2BQ9ULI0 1458 aa17.51■□□□□ 0.39
PPP3CA-205ENST00000507176 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
PPP3CA-205ENST00000507176 SMARCA2P51531 1590 aa17.43■□□□□ 0.38
PPP3CA-205ENST00000507176 ERCC6Q03468 1493 aa17.38■□□□□ 0.37
PPP3CA-205ENST00000507176 BAZ1AQ9NRL2 1556 aaPredicted RBP17.38■□□□□ 0.37
PPP3CA-205ENST00000507176 CUX2O14529 1486 aa17.35■□□□□ 0.37
PPP3CA-205ENST00000507176 NESP48681 1621 aa17.35■□□□□ 0.37
PPP3CA-205ENST00000507176 DNAJC5Q9H3Z4 198 aa17.35■□□□□ 0.37
PPP3CA-205ENST00000507176 BAZ1BQ9UIG0 1483 aaKnown RBP17.33■□□□□ 0.36
PPP3CA-205ENST00000507176 PEG3Q9GZU2 1588 aa17.32■□□□□ 0.36
PPP3CA-205ENST00000507176 MROH2BQ7Z745 1585 aa17.29■□□□□ 0.36
PPP3CA-205ENST00000507176 THOC2Q8NI27 1593 aaKnown RBP17.2■□□□□ 0.34
PPP3CA-205ENST00000507176 LAMC3Q9Y6N6 1575 aa17.17■□□□□ 0.34
PPP3CA-205ENST00000507176 KIF21AQ7Z4S6 1674 aa17.16■□□□□ 0.34
PPP3CA-205ENST00000507176 WIZO95785 1651 aa17.11■□□□□ 0.33
PPP3CA-205ENST00000507176 PDS5BQ9NTI5 1447 aa17.02■□□□□ 0.31
PPP3CA-205ENST00000507176 CADPSQ9ULU8 1353 aa16.98■□□□□ 0.31
PPP3CA-205ENST00000507176 MRC2Q9UBG0 1479 aa16.93■□□□□ 0.3
PPP3CA-205ENST00000507176 WDR62O43379 1518 aa16.92■□□□□ 0.3
PPP3CA-205ENST00000507176 RSF1Q96T23 1441 aaPredicted RBP16.88■□□□□ 0.29
PPP3CA-205ENST00000507176 CEP164Q9UPV0 1460 aa16.85■□□□□ 0.29
PPP3CA-205ENST00000507176 TOP2AP11388 1531 aaKnown RBP16.85■□□□□ 0.29
PPP3CA-205ENST00000507176 FANCD2Q9BXW9 1451 aa16.84■□□□□ 0.29
PPP3CA-205ENST00000507176 CFTRP13569 1480 aa16.81■□□□□ 0.28
PPP3CA-205ENST00000507176 URB2Q14146 1524 aaKnown RBP16.74■□□□□ 0.27
PPP3CA-205ENST00000507176 PRDM2Q13029 1718 aa16.72■□□□□ 0.27
PPP3CA-205ENST00000507176 CHIC1Q5VXU3 224 aa16.7■□□□□ 0.26
PPP3CA-205ENST00000507176 CCDC88BA6NC98 1476 aa16.64■□□□□ 0.25
PPP3CA-205ENST00000507176 TRIM41Q8WV44 630 aa16.62■□□□□ 0.25
PPP3CA-205ENST00000507176 ZNF608Q9ULD9 1512 aaPredicted RBP16.54■□□□□ 0.24
PPP3CA-205ENST00000507176 TOPBP1Q92547 1522 aa16.53■□□□□ 0.24
PPP3CA-205ENST00000507176 IFT140Q96RY7 1462 aa16.49■□□□□ 0.23
PPP3CA-205ENST00000507176 OSCARQ8IYS5 282 aa16.49■□□□□ 0.23
PPP3CA-205ENST00000507176 EIF4G3O43432 1585 aaKnown RBP16.47■□□□□ 0.23
PPP3CA-205ENST00000507176 DNMBPQ6XZF7 1577 aa16.46■□□□□ 0.23
PPP3CA-205ENST00000507176 RIMBP3CA6NJZ7 1639 aa16.42■□□□□ 0.22
PPP3CA-205ENST00000507176 RIMBP3BA6NNM3 1639 aa16.42■□□□□ 0.22
PPP3CA-205ENST00000507176 RIMBP3Q9UFD9 1639 aa16.42■□□□□ 0.22
PPP3CA-205ENST00000507176 TARBP1Q13395 1621 aaKnown RBP16.41■□□□□ 0.22
PPP3CA-205ENST00000507176 ABCC8Q09428 1581 aa16.39■□□□□ 0.21
PPP3CA-205ENST00000507176 CHD1O14646 1710 aa16.37■□□□□ 0.21
PPP3CA-205ENST00000507176 POLA1P09884 1462 aaPredicted RBP16.36■□□□□ 0.21
PPP3CA-205ENST00000507176 AQRO60306 1485 aaKnown RBP eCLIP16.35■□□□□ 0.21
PPP3CA-205ENST00000507176 ARHGEF11O15085 1522 aa16.34■□□□□ 0.21
PPP3CA-205ENST00000507176 RAD54L2Q9Y4B4 1467 aa16.31■□□□□ 0.2
PPP3CA-205ENST00000507176 CUX1P39880 1505 aa16.26■□□□□ 0.19
PPP3CA-205ENST00000507176 FGD5Q6ZNL6 1462 aa16.26■□□□□ 0.19
PPP3CA-205ENST00000507176 TDRD9Q8NDG6 1382 aaKnown RBP16.23■□□□□ 0.19
PPP3CA-205ENST00000507176 SOGA1O94964 1423 aa16.23■□□□□ 0.19
PPP3CA-205ENST00000507176 SNAPC4Q5SXM2 1469 aa16.2■□□□□ 0.18
PPP3CA-205ENST00000507176 WDR97A6NE52 1622 aa16.2■□□□□ 0.18
PPP3CA-205ENST00000507176 ARAP1Q96P48 1450 aa16.19■□□□□ 0.18
PPP3CA-205ENST00000507176 FBLN2P98095 1184 aa16.19■□□□□ 0.18
PPP3CA-205ENST00000507176 CLASP1Q7Z460 1538 aa16.15■□□□□ 0.18
PPP3CA-205ENST00000507176 CYB5RLQ6IPT4 315 aa16.15■□□□□ 0.18
PPP3CA-205ENST00000507176 PBRM1Q86U86 1689 aa16.13■□□□□ 0.17
PPP3CA-205ENST00000507176 MAGI1Q96QZ7 1491 aaPredicted RBP16.11■□□□□ 0.17
PPP3CA-205ENST00000507176 GRIN2BQ13224 1484 aa16.1■□□□□ 0.17
PPP3CA-205ENST00000507176 SYNJ1O43426 1573 aa16.09■□□□□ 0.17
PPP3CA-205ENST00000507176 ABCA5Q8WWZ7 1642 aa16.08■□□□□ 0.16
PPP3CA-205ENST00000507176 SUPT5HO00267 1087 aaKnown RBP16.06■□□□□ 0.16
PPP3CA-205ENST00000507176 SYNJ2O15056 1496 aa16.06■□□□□ 0.16
PPP3CA-205ENST00000507176 GAPVD1Q14C86 1478 aa16.05■□□□□ 0.16
PPP3CA-205ENST00000507176 ABCA10Q8WWZ4 1543 aa16.04■□□□□ 0.16
PPP3CA-205ENST00000507176 CHMP7Q8WUX9 453 aaPredicted RBP16.04■□□□□ 0.16
PPP3CA-205ENST00000507176 BIVM-ERCC5R4GMW8 1640 aa15.98■□□□□ 0.15
PPP3CA-205ENST00000507176 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
PPP3CA-205ENST00000507176 TOP2BQ02880 1626 aa15.96■□□□□ 0.15
PPP3CA-205ENST00000507176 ADAMTS12P58397 1594 aa15.96■□□□□ 0.15
PPP3CA-205ENST00000507176 ERCC6L2Q5T890 1561 aa15.93■□□□□ 0.14
PPP3CA-205ENST00000507176 GRIN2AQ12879 1464 aa15.93■□□□□ 0.14
PPP3CA-205ENST00000507176 WRNQ14191 1432 aaPredicted RBP eCLIP15.93■□□□□ 0.14
PPP3CA-205ENST00000507176 CEP170Q5SW79 1584 aa15.92■□□□□ 0.14
PPP3CA-205ENST00000507176 NUP160Q12769 1436 aa15.87■□□□□ 0.13
PPP3CA-205ENST00000507176 SHROOM2Q13796 1616 aa15.84■□□□□ 0.13
PPP3CA-205ENST00000507176 ERICH3Q5RHP9 1530 aa15.83■□□□□ 0.12
PPP3CA-205ENST00000507176 FHAD1B1AJZ9 1412 aa15.83■□□□□ 0.12
PPP3CA-205ENST00000507176 RUSC2Q8N2Y8 1516 aa15.74■□□□□ 0.11
PPP3CA-205ENST00000507176 PRG4Q92954 1404 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms