RNA–Protein interactions for RNA: ENST00000583389.5

EIF4A1-228, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 3

Gene EIF4A1, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-228ENST00000583389 NISCHQ9Y2I1 1504 aa34.81■■■■□ 3.16
EIF4A1-228ENST00000583389 CCDC180Q9P1Z9 1646 aa30.92■■■□□ 2.54
EIF4A1-228ENST00000583389 ABCC9O60706 1549 aa29.75■■■□□ 2.35
EIF4A1-228ENST00000583389 ZCCHC6Q5VYS8 1495 aaKnown RBP29.09■■■□□ 2.25
EIF4A1-228ENST00000583389 NACADO15069 1562 aa28.95■■■□□ 2.22
EIF4A1-228ENST00000583389 MYO15BQ96JP2 1530 aa28.92■■■□□ 2.22
EIF4A1-228ENST00000583389 DCAF1Q9Y4B6 1507 aa28.91■■■□□ 2.22
EIF4A1-228ENST00000583389 RB1CC1Q8TDY2 1594 aa28.89■■■□□ 2.22
EIF4A1-228ENST00000583389 DCAF8L2P0C7V8 631 aa28.8■■■□□ 2.2
EIF4A1-228ENST00000583389 UNC13AQ9UPW8 1703 aa28.25■■■□□ 2.11
EIF4A1-228ENST00000583389 SCRIBQ14160 1630 aa28.11■■■□□ 2.09
EIF4A1-228ENST00000583389 BICRAQ9NZM4 1560 aa27.94■■■□□ 2.06
EIF4A1-228ENST00000583389 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.04
EIF4A1-228ENST00000583389 PABPN1Q86U42 306 aaKnown RBP eCLIP27.78■■■□□ 2.04
EIF4A1-228ENST00000583389 EIF4G1Q04637 1599 aaKnown RBP27.2■■□□□ 1.94
EIF4A1-228ENST00000583389 BAZ1AQ9NRL2 1556 aaPredicted RBP27.01■■□□□ 1.91
EIF4A1-228ENST00000583389 CECR2Q9BXF3 1484 aa27■■□□□ 1.91
EIF4A1-228ENST00000583389 CC2D2AQ9P2K1 1620 aa26.99■■□□□ 1.91
EIF4A1-228ENST00000583389 SMARCA4P51532 1647 aa26.97■■□□□ 1.91
EIF4A1-228ENST00000583389 DNAJC5BQ9UF47 199 aa26.9■■□□□ 1.9
EIF4A1-228ENST00000583389 MROH2BQ7Z745 1585 aa26.79■■□□□ 1.88
EIF4A1-228ENST00000583389 SMARCA2P51531 1590 aa26.75■■□□□ 1.87
EIF4A1-228ENST00000583389 PEG3Q9GZU2 1588 aa26.74■■□□□ 1.87
EIF4A1-228ENST00000583389 ATAD2BQ9ULI0 1458 aa26.69■■□□□ 1.86
EIF4A1-228ENST00000583389 NCAPD3P42695 1498 aa26.66■■□□□ 1.86
EIF4A1-228ENST00000583389 HMGXB3Q12766 1538 aa26.61■■□□□ 1.85
EIF4A1-228ENST00000583389 RSF1Q96T23 1441 aaPredicted RBP26.61■■□□□ 1.85
EIF4A1-228ENST00000583389 WIZO95785 1651 aa26.54■■□□□ 1.84
EIF4A1-228ENST00000583389 BAZ1BQ9UIG0 1483 aaKnown RBP26.52■■□□□ 1.84
EIF4A1-228ENST00000583389 TOP2AP11388 1531 aaKnown RBP26.33■■□□□ 1.81
EIF4A1-228ENST00000583389 SUPT5HO00267 1087 aaKnown RBP26.09■■□□□ 1.77
EIF4A1-228ENST00000583389 LAMC3Q9Y6N6 1575 aa25.95■■□□□ 1.75
EIF4A1-228ENST00000583389 CCDC88BA6NC98 1476 aa25.95■■□□□ 1.74
EIF4A1-228ENST00000583389 CADPSQ9ULU8 1353 aa25.87■■□□□ 1.73
EIF4A1-228ENST00000583389 NESP48681 1621 aa25.83■■□□□ 1.73
EIF4A1-228ENST00000583389 CFTRP13569 1480 aa25.81■■□□□ 1.72
EIF4A1-228ENST00000583389 PRDM2Q13029 1718 aa25.78■■□□□ 1.72
EIF4A1-228ENST00000583389 PDS5BQ9NTI5 1447 aa25.73■■□□□ 1.71
EIF4A1-228ENST00000583389 ERCC6Q03468 1493 aa25.67■■□□□ 1.7
EIF4A1-228ENST00000583389 KIF21AQ7Z4S6 1674 aa25.64■■□□□ 1.69
EIF4A1-228ENST00000583389 FANCD2Q9BXW9 1451 aa25.58■■□□□ 1.69
EIF4A1-228ENST00000583389 CEP164Q9UPV0 1460 aa25.54■■□□□ 1.68
EIF4A1-228ENST00000583389 THOC2Q8NI27 1593 aaKnown RBP25.47■■□□□ 1.67
EIF4A1-228ENST00000583389 MRC2Q9UBG0 1479 aa25.43■■□□□ 1.66
EIF4A1-228ENST00000583389 WDR62O43379 1518 aa25.36■■□□□ 1.65
EIF4A1-228ENST00000583389 CUX2O14529 1486 aa25.34■■□□□ 1.65
EIF4A1-228ENST00000583389 ABCC8Q09428 1581 aa25.31■■□□□ 1.64
EIF4A1-228ENST00000583389 URB2Q14146 1524 aaKnown RBP25.28■■□□□ 1.64
EIF4A1-228ENST00000583389 DNMBPQ6XZF7 1577 aa25.26■■□□□ 1.63
EIF4A1-228ENST00000583389 TOPBP1Q92547 1522 aa25.22■■□□□ 1.63
EIF4A1-228ENST00000583389 CUX1P39880 1505 aa25.13■■□□□ 1.61
EIF4A1-228ENST00000583389 WRNQ14191 1432 aaPredicted RBP eCLIP25.11■■□□□ 1.61
EIF4A1-228ENST00000583389 BIVM-ERCC5R4GMW8 1640 aa25.08■■□□□ 1.6
EIF4A1-228ENST00000583389 TOP2BQ02880 1626 aa25.07■■□□□ 1.6
EIF4A1-228ENST00000583389 SYNJ1O43426 1573 aa25.02■■□□□ 1.6
EIF4A1-228ENST00000583389 POLA1P09884 1462 aaPredicted RBP25.02■■□□□ 1.6
EIF4A1-228ENST00000583389 FGD5Q6ZNL6 1462 aa25■■□□□ 1.59
EIF4A1-228ENST00000583389 IFT140Q96RY7 1462 aa25■■□□□ 1.59
EIF4A1-228ENST00000583389 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
EIF4A1-228ENST00000583389 SOGA1O94964 1423 aa24.9■■□□□ 1.58
EIF4A1-228ENST00000583389 WDR97A6NE52 1622 aa24.87■■□□□ 1.57
EIF4A1-228ENST00000583389 RAD54L2Q9Y4B4 1467 aa24.85■■□□□ 1.57
EIF4A1-228ENST00000583389 ABCA10Q8WWZ4 1543 aa24.81■■□□□ 1.56
EIF4A1-228ENST00000583389 EIF4G3O43432 1585 aaKnown RBP24.78■■□□□ 1.56
EIF4A1-228ENST00000583389 ZNF608Q9ULD9 1512 aaPredicted RBP24.77■■□□□ 1.56
EIF4A1-228ENST00000583389 TRIM41Q8WV44 630 aa24.7■■□□□ 1.54
EIF4A1-228ENST00000583389 ABCA5Q8WWZ7 1642 aa24.7■■□□□ 1.54
EIF4A1-228ENST00000583389 TDRD9Q8NDG6 1382 aaKnown RBP24.67■■□□□ 1.54
EIF4A1-228ENST00000583389 AQRO60306 1485 aaKnown RBP eCLIP24.67■■□□□ 1.543e-11■■■■□ 26.4
EIF4A1-228ENST00000583389 GAPVD1Q14C86 1478 aa24.64■■□□□ 1.54
EIF4A1-228ENST00000583389 PBRM1Q86U86 1689 aa24.64■■□□□ 1.53
EIF4A1-228ENST00000583389 GRIN2BQ13224 1484 aa24.61■■□□□ 1.53
EIF4A1-228ENST00000583389 CHIC1Q5VXU3 224 aa24.58■■□□□ 1.53
EIF4A1-228ENST00000583389 KIF27Q86VH2 1401 aa24.58■■□□□ 1.53
EIF4A1-228ENST00000583389 ERICH3Q5RHP9 1530 aa24.55■■□□□ 1.52
EIF4A1-228ENST00000583389 MAGI1Q96QZ7 1491 aaPredicted RBP24.54■■□□□ 1.52
EIF4A1-228ENST00000583389 SNAPC4Q5SXM2 1469 aa24.5■■□□□ 1.51
EIF4A1-228ENST00000583389 ADAMTS12P58397 1594 aa24.44■■□□□ 1.5
EIF4A1-228ENST00000583389 CUL7Q14999 1698 aa24.43■■□□□ 1.5
EIF4A1-228ENST00000583389 CHD1O14646 1710 aa24.42■■□□□ 1.5
EIF4A1-228ENST00000583389 SYNJ2O15056 1496 aa24.42■■□□□ 1.5
EIF4A1-228ENST00000583389 FHAD1B1AJZ9 1412 aa24.38■■□□□ 1.49
EIF4A1-228ENST00000583389 EEA1Q15075 1411 aa24.38■■□□□ 1.49
EIF4A1-228ENST00000583389 IGF1RP08069 1367 aa24.38■■□□□ 1.49
EIF4A1-228ENST00000583389 RUSC2Q8N2Y8 1516 aa24.35■■□□□ 1.49
EIF4A1-228ENST00000583389 CHMP7Q8WUX9 453 aaPredicted RBP24.32■■□□□ 1.48
EIF4A1-228ENST00000583389 GRIN2AQ12879 1464 aa24.29■■□□□ 1.48
EIF4A1-228ENST00000583389 FBLN2P98095 1184 aa24.28■■□□□ 1.48
EIF4A1-228ENST00000583389 OSCARQ8IYS5 282 aa24.26■■□□□ 1.47
EIF4A1-228ENST00000583389 CARMIL1Q5VZK9 1371 aa24.26■■□□□ 1.47
EIF4A1-228ENST00000583389 CSRNP3Q8WYN3 585 aa24.19■■□□□ 1.46
EIF4A1-228ENST00000583389 RAPGEF2Q9Y4G8 1499 aa24.19■■□□□ 1.46
EIF4A1-228ENST00000583389 PRXQ9BXM0 1461 aa24.18■■□□□ 1.46
EIF4A1-228ENST00000583389 NUP160Q12769 1436 aa24.17■■□□□ 1.46
EIF4A1-228ENST00000583389 CLASP1Q7Z460 1538 aa24.15■■□□□ 1.46
EIF4A1-228ENST00000583389 CEP170Q5SW79 1584 aa24.14■■□□□ 1.45
EIF4A1-228ENST00000583389 KIF21BO75037 1637 aa24.1■■□□□ 1.45
EIF4A1-228ENST00000583389 FAM9AQ8IZU1 332 aaPredicted RBP24.08■■□□□ 1.45
EIF4A1-228ENST00000583389 DNAJC5Q9H3Z4 198 aa24.06■■□□□ 1.44
EIF4A1-228ENST00000583389 KIAA0586Q9BVV6 1533 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms