Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 VCL-206ENST00000623461 7995 ntTSL 1 (best)10.01□□□□□ -0.813e-6■■□□□ 14.2
SND1Q7KZF4 CFB-283ENST00000497841 736 ntTSL 38.54□□□□□ -1.049e-17■■□□□ 14.2
SND1Q7KZF4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.92■■□□□ 1.582e-6■■□□□ 14.2
SND1Q7KZF4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.972e-6■■□□□ 14.2
SND1Q7KZF4 UXS1-206ENST00000441952 570 ntTSL 219.05■□□□□ 0.642e-6■■□□□ 14.2
SND1Q7KZF4 UXS1-202ENST00000409032 1935 ntTSL 1 (best) BASIC11.52□□□□□ -0.572e-6■■□□□ 14.2
SND1Q7KZF4 VIM-203ENST00000469543 2666 ntTSL 220.91■□□□□ 0.942e-10■■□□□ 14.2
SND1Q7KZF4 VIM-202ENST00000421459 753 ntTSL 28.37□□□□□ -1.072e-10■■□□□ 14.2
SND1Q7KZF4 NPC1-213ENST00000591955 561 ntTSL 46.49□□□□□ -1.372e-11■■□□□ 14.2
SND1Q7KZF4 HBP1-215ENST00000607681 476 ntTSL 25.45□□□□□ -1.544e-6■■□□□ 14.2
SND1Q7KZF4 NPC1-207ENST00000588867 2000 ntTSL 515.11■□□□□ 0.011e-8■■□□□ 14.2
SND1Q7KZF4 NPC1-212ENST00000591107 890 ntTSL 313.62□□□□□ -0.231e-8■■□□□ 14.2
SND1Q7KZF4 NPC1-203ENST00000586150 571 ntTSL 313.56□□□□□ -0.241e-8■■□□□ 14.2
SND1Q7KZF4 CP-212ENST00000490639 3105 ntTSL 1 (best)5.6□□□□□ -1.518e-9■■□□□ 14.2
SND1Q7KZF4 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.12e-7■■□□□ 14.1
SND1Q7KZF4 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.352e-7■■□□□ 14.1
SND1Q7KZF4 PIGO-207ENST00000491687 762 ntTSL 310.93□□□□□ -0.665e-6■■□□□ 14.1
SND1Q7KZF4 FN1-219ENST00000474036 1058 ntTSL 27.44□□□□□ -1.227e-7■■□□□ 14.1
SND1Q7KZF4 IDH1-209ENST00000484575 1044 ntTSL 28.06□□□□□ -1.121e-8■■□□□ 14.1
SND1Q7KZF4 UGGT1-207ENST00000488439 928 ntTSL 514.97□□□□□ -0.011e-6■■□□□ 14.1
SND1Q7KZF4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.371e-7■■□□□ 14.1
SND1Q7KZF4 SGSH-213ENST00000575282 5562 ntTSL 1 (best)15.65■□□□□ 0.11e-7■■□□□ 14.1
SND1Q7KZF4 SGSH-210ENST00000573150 2612 ntTSL 215.07■□□□□ 01e-7■■□□□ 14.1
SND1Q7KZF4 GAA-203ENST00000570716 534 ntTSL 216.71■□□□□ 0.277e-9■■□□□ 14.1
SND1Q7KZF4 CP-210ENST00000481169 3411 ntTSL 27.39□□□□□ -1.238e-9■■□□□ 14.1
SND1Q7KZF4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.598e-9■■□□□ 14.1
SND1Q7KZF4 TNFRSF1B-203ENST00000492361 3583 ntTSL 1 (best)16.94■□□□□ 0.38e-7■■□□□ 14.1
SND1Q7KZF4 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.178e-7■■□□□ 14.1
SND1Q7KZF4 C3-202ENST00000594005 418 ntTSL 311.91□□□□□ -0.51e-323■■□□□ 14.1
SND1Q7KZF4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.112e-21■■□□□ 14.1
SND1Q7KZF4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.852e-21■■□□□ 14.1
SND1Q7KZF4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.44■□□□□ 0.382e-21■■□□□ 14.1
SND1Q7KZF4 SEMA4C-205ENST00000474420 2625 ntTSL 221.3■■□□□ 18e-8■■□□□ 14.1
SND1Q7KZF4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.358e-8■■□□□ 14.1
SND1Q7KZF4 SEMA4C-204ENST00000467747 3371 ntTSL 216.37■□□□□ 0.218e-8■■□□□ 14.1
SND1Q7KZF4 SEMA4C-206ENST00000482925 3776 ntTSL 215.28■□□□□ 0.048e-8■■□□□ 14.1
SND1Q7KZF4 GAA-202ENST00000390015 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.348e-8■■□□□ 14.1
SND1Q7KZF4 GAA-201ENST00000302262 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.418e-8■■□□□ 14.1
SND1Q7KZF4 APOC1-204ENST00000589078 213 ntTSL 210.06□□□□□ -0.84e-31■■□□□ 14.1
SND1Q7KZF4 GUSB-214ENST00000489482 519 ntTSL 214.08□□□□□ -0.163e-14■■□□□ 14.1
SND1Q7KZF4 CCT7-213ENST00000488856 612 ntTSL 28.72□□□□□ -1.013e-16■■□□□ 14.1
SND1Q7KZF4 ALDOA-218ENST00000566146 365 ntTSL 1 (best)9.43□□□□□ -0.93e-34■■□□□ 14.1
SND1Q7KZF4 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC13.67□□□□□ -0.224e-7■■□□□ 14.1
SND1Q7KZF4 CLCC1-207ENST00000369976 2468 ntTSL 2 BASIC13.55□□□□□ -0.244e-7■■□□□ 14.1
SND1Q7KZF4 AL449266.1-201ENST00000357393 557 ntAPPRIS P1 TSL 4 BASIC12.07□□□□□ -0.484e-7■■□□□ 14.1
SND1Q7KZF4 CLCC1-201ENST00000302500 1316 ntTSL 1 (best) BASIC11.52□□□□□ -0.574e-7■■□□□ 14.1
SND1Q7KZF4 CLCC1-206ENST00000369970 2078 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.874e-7■■□□□ 14.1
SND1Q7KZF4 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.084e-7■■□□□ 14.1
SND1Q7KZF4 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.02□□□□□ -1.294e-7■■□□□ 14.1
SND1Q7KZF4 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.97□□□□□ -1.294e-7■■□□□ 14.1
SND1Q7KZF4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.45■□□□□ 0.221e-7■■□□□ 14.1
SND1Q7KZF4 TM9SF4-204ENST00000442842 563 ntTSL 414.13□□□□□ -0.152e-9■■□□□ 14.1
SND1Q7KZF4 TM9SF4-205ENST00000450829 550 ntTSL 46.06□□□□□ -1.442e-9■■□□□ 14.1
SND1Q7KZF4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.331e-6■■□□□ 14.1
SND1Q7KZF4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.7■□□□□ 0.741e-6■■□□□ 14.1
SND1Q7KZF4 KCNN4-205ENST00000599720 983 ntTSL 518.21■□□□□ 0.511e-6■■□□□ 14.1
SND1Q7KZF4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.061e-9■■□□□ 14.1
SND1Q7KZF4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.461e-9■■□□□ 14.1
SND1Q7KZF4 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 01e-9■■□□□ 14.1
SND1Q7KZF4 SLC43A3-202ENST00000395123 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.351e-9■■□□□ 14.1
SND1Q7KZF4 SLC43A3-201ENST00000352187 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.581e-9■■□□□ 14.1
SND1Q7KZF4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.613e-6■■□□□ 14.1
SND1Q7KZF4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.573e-6■■□□□ 14.1
SND1Q7KZF4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.73■■□□□ 1.874e-9■■□□□ 14
SND1Q7KZF4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.714e-9■■□□□ 14
SND1Q7KZF4 GPS1-206ENST00000578279 875 ntTSL 517.93■□□□□ 0.464e-9■■□□□ 14
SND1Q7KZF4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.454e-9■■□□□ 14
SND1Q7KZF4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.54■□□□□ 0.44e-9■■□□□ 14
SND1Q7KZF4 GPS1-224ENST00000584460 1855 ntTSL 217.53■□□□□ 0.44e-9■■□□□ 14
SND1Q7KZF4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.44e-9■■□□□ 14
SND1Q7KZF4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.284e-9■■□□□ 14
SND1Q7KZF4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.47■□□□□ 0.234e-9■■□□□ 14
SND1Q7KZF4 GPS1-203ENST00000392357 4076 ntTSL 1 (best)15.42■□□□□ 0.064e-9■■□□□ 14
SND1Q7KZF4 FOXRED2-202ENST00000366463 2489 ntTSL 213.91□□□□□ -0.183e-6■■□□□ 14
SND1Q7KZF4 C5-204ENST00000480188 619 ntTSL 27.44□□□□□ -1.222e-9■■□□□ 14
SND1Q7KZF4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 14e-7■■□□□ 14
SND1Q7KZF4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.534e-7■■□□□ 14
SND1Q7KZF4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.514e-7■■□□□ 14
SND1Q7KZF4 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.244e-7■■□□□ 14
SND1Q7KZF4 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 04e-7■■□□□ 14
SND1Q7KZF4 FN1-226ENST00000496542 695 ntTSL 213.33□□□□□ -0.283e-6■■□□□ 14
SND1Q7KZF4 GFPT1-204ENST00000494201 625 ntTSL 57.27□□□□□ -1.253e-6■■□□□ 14
SND1Q7KZF4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.215e-7■■□□□ 14
SND1Q7KZF4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.1■□□□□ 0.815e-7■■□□□ 14
SND1Q7KZF4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.675e-7■■□□□ 14
SND1Q7KZF4 TMX2-CTNND1-201ENST00000528395 585 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.542e-6■■□□□ 14
SND1Q7KZF4 TMX2-207ENST00000529403 1697 ntTSL 29.6□□□□□ -0.872e-6■■□□□ 14
SND1Q7KZF4 TUBA1C-204ENST00000549183 696 ntTSL 2 BASIC9.39□□□□□ -0.911e-8■■□□□ 14
SND1Q7KZF4 TMX2-206ENST00000528110 829 ntTSL 29.01□□□□□ -0.972e-6■■□□□ 14
SND1Q7KZF4 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.992e-6■■□□□ 14
SND1Q7KZF4 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC8.54□□□□□ -1.042e-6■■□□□ 14
SND1Q7KZF4 TMX2-208ENST00000530114 663 ntTSL 38.23□□□□□ -1.092e-6■■□□□ 14
SND1Q7KZF4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.24■■□□□ 1.637e-7■■□□□ 14
SND1Q7KZF4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.12■□□□□ 0.497e-7■■□□□ 14
SND1Q7KZF4 ZNF767P-204ENST00000486492 1616 ntTSL 217.76■□□□□ 0.437e-7■■□□□ 14
SND1Q7KZF4 ZNF767P-203ENST00000481762 357 ntTSL 38.45□□□□□ -1.067e-7■■□□□ 14
SND1Q7KZF4 SLC25A3-205ENST00000547444 517 ntTSL 1 (best)8.71□□□□□ -1.022e-6■■□□□ 14
SND1Q7KZF4 COPB1-201ENST00000249923 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.639e-7■■□□□ 14
SND1Q7KZF4 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.779e-7■■□□□ 14
SND1Q7KZF4 TKT-213ENST00000487660 610 ntTSL 217.19■□□□□ 0.342e-13■■□□□ 14
Retrieved 100 of 13,567 protein–RNA pairs in 130.4 ms