RNA–Protein interactions for RNA: ENST00000623761.3

GPS1-227, Transcript of G protein pathway suppressor 1, humanhuman

TSL 2 BASIC

Gene GPS1, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPS1-227ENST00000623761 NISCHQ9Y2I1 1504 aa35.68■■■■□ 3.3
GPS1-227ENST00000623761 CCDC180Q9P1Z9 1646 aa31.35■■■□□ 2.61
GPS1-227ENST00000623761 ZCCHC6Q5VYS8 1495 aaKnown RBP29.93■■■□□ 2.38
GPS1-227ENST00000623761 ABCC9O60706 1549 aa29.71■■■□□ 2.35
GPS1-227ENST00000623761 DCAF1Q9Y4B6 1507 aa29.6■■■□□ 2.33
GPS1-227ENST00000623761 MYO15BQ96JP2 1530 aa29.39■■■□□ 2.3
GPS1-227ENST00000623761 DCAF8L2P0C7V8 631 aa29.38■■■□□ 2.29
GPS1-227ENST00000623761 NACADO15069 1562 aa29.24■■■□□ 2.27
GPS1-227ENST00000623761 RB1CC1Q8TDY2 1594 aa29.04■■■□□ 2.24
GPS1-227ENST00000623761 SHROOM4Q9ULL8 1493 aa28.7■■■□□ 2.19
GPS1-227ENST00000623761 SCRIBQ14160 1630 aa28.63■■■□□ 2.17
GPS1-227ENST00000623761 UNC13AQ9UPW8 1703 aa28.4■■■□□ 2.14
GPS1-227ENST00000623761 BICRAQ9NZM4 1560 aa28.1■■■□□ 2.09
GPS1-227ENST00000623761 PABPN1Q86U42 306 aaKnown RBP eCLIP27.9■■■□□ 2.062e-7■■■□□ 16.2
GPS1-227ENST00000623761 CECR2Q9BXF3 1484 aa27.65■■■□□ 2.02
GPS1-227ENST00000623761 SUPT5HO00267 1087 aaKnown RBP27.63■■■□□ 2.01
GPS1-227ENST00000623761 BAZ1AQ9NRL2 1556 aaPredicted RBP27.62■■■□□ 2.01
GPS1-227ENST00000623761 RSF1Q96T23 1441 aaPredicted RBP27.52■■■□□ 2
GPS1-227ENST00000623761 SMARCA4P51532 1647 aa27.5■■□□□ 1.99
GPS1-227ENST00000623761 MROH2BQ7Z745 1585 aa27.5■■□□□ 1.99
GPS1-227ENST00000623761 EIF4G1Q04637 1599 aaKnown RBP27.3■■□□□ 1.96
GPS1-227ENST00000623761 WIZO95785 1651 aa27.26■■□□□ 1.95
GPS1-227ENST00000623761 PEG3Q9GZU2 1588 aa27.24■■□□□ 1.95
GPS1-227ENST00000623761 SMARCA2P51531 1590 aa27.15■■□□□ 1.94
GPS1-227ENST00000623761 ATAD2BQ9ULI0 1458 aa27.09■■□□□ 1.93
GPS1-227ENST00000623761 TOP2AP11388 1531 aaKnown RBP27.04■■□□□ 1.92
GPS1-227ENST00000623761 CC2D2AQ9P2K1 1620 aa26.95■■□□□ 1.9
GPS1-227ENST00000623761 NCAPD3P42695 1498 aa26.95■■□□□ 1.9
GPS1-227ENST00000623761 BAZ1BQ9UIG0 1483 aaKnown RBP26.94■■□□□ 1.9
GPS1-227ENST00000623761 HMGXB3Q12766 1538 aa26.93■■□□□ 1.9
GPS1-227ENST00000623761 CCDC88BA6NC98 1476 aa26.69■■□□□ 1.86
GPS1-227ENST00000623761 CHIC1Q5VXU3 224 aa26.49■■□□□ 1.83
GPS1-227ENST00000623761 DNAJC5BQ9UF47 199 aa26.37■■□□□ 1.81
GPS1-227ENST00000623761 CFTRP13569 1480 aa26.27■■□□□ 1.8
GPS1-227ENST00000623761 CADPSQ9ULU8 1353 aa26.21■■□□□ 1.79
GPS1-227ENST00000623761 PRDM2Q13029 1718 aa26.19■■□□□ 1.78
GPS1-227ENST00000623761 LAMC3Q9Y6N6 1575 aa26.12■■□□□ 1.77
GPS1-227ENST00000623761 TRIM41Q8WV44 630 aa26■■□□□ 1.75
GPS1-227ENST00000623761 ABCC8Q09428 1581 aa25.99■■□□□ 1.75
GPS1-227ENST00000623761 NESP48681 1621 aa25.98■■□□□ 1.75
GPS1-227ENST00000623761 WRNQ14191 1432 aaPredicted RBP eCLIP25.94■■□□□ 1.74
GPS1-227ENST00000623761 FANCD2Q9BXW9 1451 aa25.91■■□□□ 1.74
GPS1-227ENST00000623761 PDS5BQ9NTI5 1447 aa25.9■■□□□ 1.74
GPS1-227ENST00000623761 SYNJ1O43426 1573 aa25.82■■□□□ 1.72
GPS1-227ENST00000623761 CEP164Q9UPV0 1460 aa25.8■■□□□ 1.72
GPS1-227ENST00000623761 TOP2BQ02880 1626 aa25.8■■□□□ 1.72
GPS1-227ENST00000623761 BIVM-ERCC5R4GMW8 1640 aa25.79■■□□□ 1.72
GPS1-227ENST00000623761 CUX1P39880 1505 aa25.74■■□□□ 1.71
GPS1-227ENST00000623761 KIF21AQ7Z4S6 1674 aa25.74■■□□□ 1.71
GPS1-227ENST00000623761 DNMBPQ6XZF7 1577 aa25.67■■□□□ 1.7
GPS1-227ENST00000623761 TOPBP1Q92547 1522 aa25.6■■□□□ 1.69
GPS1-227ENST00000623761 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.69
GPS1-227ENST00000623761 ERCC6Q03468 1493 aa25.57■■□□□ 1.68
GPS1-227ENST00000623761 MRC2Q9UBG0 1479 aa25.56■■□□□ 1.68
GPS1-227ENST00000623761 FGD5Q6ZNL6 1462 aa25.52■■□□□ 1.68
GPS1-227ENST00000623761 EEA1Q15075 1411 aa25.5■■□□□ 1.67
GPS1-227ENST00000623761 FAM9AQ8IZU1 332 aaPredicted RBP25.5■■□□□ 1.67
GPS1-227ENST00000623761 LOC105371045A0A1W2PR82 267 aa25.47■■□□□ 1.67
GPS1-227ENST00000623761 WDR62O43379 1518 aa25.46■■□□□ 1.67
GPS1-227ENST00000623761 POLA1P09884 1462 aaPredicted RBP25.45■■□□□ 1.66
GPS1-227ENST00000623761 SOGA1O94964 1423 aa25.44■■□□□ 1.66
GPS1-227ENST00000623761 THOC2Q8NI27 1593 aaKnown RBP25.43■■□□□ 1.66
GPS1-227ENST00000623761 KIF27Q86VH2 1401 aa25.33■■□□□ 1.65
GPS1-227ENST00000623761 ABCA10Q8WWZ4 1543 aa25.33■■□□□ 1.65
GPS1-227ENST00000623761 RUSC2Q8N2Y8 1516 aa25.33■■□□□ 1.65
GPS1-227ENST00000623761 RAD54L2Q9Y4B4 1467 aa25.29■■□□□ 1.64
GPS1-227ENST00000623761 WDR97A6NE52 1622 aa25.29■■□□□ 1.64
GPS1-227ENST00000623761 CUX2O14529 1486 aa25.28■■□□□ 1.64
GPS1-227ENST00000623761 CSRNP3Q8WYN3 585 aa25.27■■□□□ 1.64
GPS1-227ENST00000623761 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
GPS1-227ENST00000623761 IFT140Q96RY7 1462 aa25.22■■□□□ 1.63
GPS1-227ENST00000623761 KIF21BO75037 1637 aa25.15■■□□□ 1.62
GPS1-227ENST00000623761 ABCA5Q8WWZ7 1642 aa25.15■■□□□ 1.62
GPS1-227ENST00000623761 EHMT2Q96KQ7 1210 aa25.14■■□□□ 1.61
GPS1-227ENST00000623761 GAPVD1Q14C86 1478 aa25.09■■□□□ 1.61
GPS1-227ENST00000623761 IGF1RP08069 1367 aa25.08■■□□□ 1.61
GPS1-227ENST00000623761 PRXQ9BXM0 1461 aa25.08■■□□□ 1.6
GPS1-227ENST00000623761 GOLGA3Q08378 1498 aa25.07■■□□□ 1.6
GPS1-227ENST00000623761 TDRD9Q8NDG6 1382 aaKnown RBP25.07■■□□□ 1.6
GPS1-227ENST00000623761 ERICH3Q5RHP9 1530 aa25.06■■□□□ 1.6
GPS1-227ENST00000623761 CUL7Q14999 1698 aa25.03■■□□□ 1.6
GPS1-227ENST00000623761 PBRM1Q86U86 1689 aa24.99■■□□□ 1.59
GPS1-227ENST00000623761 ZNF608Q9ULD9 1512 aaPredicted RBP24.99■■□□□ 1.59
GPS1-227ENST00000623761 EIF4G3O43432 1585 aaKnown RBP24.98■■□□□ 1.59
GPS1-227ENST00000623761 AQRO60306 1485 aaKnown RBP eCLIP24.97■■□□□ 1.593e-8■□□□□ 10.6
GPS1-227ENST00000623761 RAPGEF2Q9Y4G8 1499 aa24.97■■□□□ 1.59
GPS1-227ENST00000623761 CARMIL1Q5VZK9 1371 aa24.97■■□□□ 1.59
GPS1-227ENST00000623761 GRIN2BQ13224 1484 aa24.96■■□□□ 1.59
GPS1-227ENST00000623761 TNIKQ9UKE5 1360 aa24.92■■□□□ 1.58
GPS1-227ENST00000623761 UBTFP17480 764 aaKnown RBP24.88■■□□□ 1.57
GPS1-227ENST00000623761 ADAMTS12P58397 1594 aa24.84■■□□□ 1.57
GPS1-227ENST00000623761 FHAD1B1AJZ9 1412 aa24.83■■□□□ 1.57
GPS1-227ENST00000623761 MAGI1Q96QZ7 1491 aaPredicted RBP24.81■■□□□ 1.56
GPS1-227ENST00000623761 CEP162Q5TB80 1403 aa24.8■■□□□ 1.56
GPS1-227ENST00000623761 SNAPC4Q5SXM2 1469 aa24.78■■□□□ 1.56
GPS1-227ENST00000623761 SYNJ2O15056 1496 aa24.69■■□□□ 1.54
GPS1-227ENST00000623761 CTTNBP2Q8WZ74 1663 aa24.68■■□□□ 1.54
GPS1-227ENST00000623761 GRIN2AQ12879 1464 aa24.64■■□□□ 1.54
GPS1-227ENST00000623761 CLIP1P30622 1438 aa24.62■■□□□ 1.53
GPS1-227ENST00000623761 CHMP7Q8WUX9 453 aaPredicted RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms