RNA–Protein interactions for RNA: ENST00000529554.5

SLC43A3-214, Transcript of solute carrier family 43 member 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLC43A3, Length 2,207 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-214ENST00000529554 NISCHQ9Y2I1 1504 aa30.78■■■□□ 2.52
SLC43A3-214ENST00000529554 CCDC180Q9P1Z9 1646 aa26.59■■□□□ 1.85
SLC43A3-214ENST00000529554 ZCCHC6Q5VYS8 1495 aaKnown RBP25.92■■□□□ 1.74
SLC43A3-214ENST00000529554 SHROOM4Q9ULL8 1493 aa25.54■■□□□ 1.68
SLC43A3-214ENST00000529554 DCAF8L2P0C7V8 631 aa25.45■■□□□ 1.66
SLC43A3-214ENST00000529554 DCAF1Q9Y4B6 1507 aa25.36■■□□□ 1.65
SLC43A3-214ENST00000529554 ABCC9O60706 1549 aa24.94■■□□□ 1.58
SLC43A3-214ENST00000529554 MYO15BQ96JP2 1530 aa24.89■■□□□ 1.57
SLC43A3-214ENST00000529554 SUPT5HO00267 1087 aaKnown RBP24.76■■□□□ 1.55
SLC43A3-214ENST00000529554 NACADO15069 1562 aa24.68■■□□□ 1.54
SLC43A3-214ENST00000529554 SCRIBQ14160 1630 aa24.64■■□□□ 1.53
SLC43A3-214ENST00000529554 RB1CC1Q8TDY2 1594 aa24.4■■□□□ 1.5
SLC43A3-214ENST00000529554 RSF1Q96T23 1441 aaPredicted RBP24.06■■□□□ 1.44
SLC43A3-214ENST00000529554 UNC13AQ9UPW8 1703 aa24.02■■□□□ 1.43
SLC43A3-214ENST00000529554 CECR2Q9BXF3 1484 aa23.96■■□□□ 1.43
SLC43A3-214ENST00000529554 CHIC1Q5VXU3 224 aa23.84■■□□□ 1.41
SLC43A3-214ENST00000529554 MROH2BQ7Z745 1585 aa23.84■■□□□ 1.41
SLC43A3-214ENST00000529554 BICRAQ9NZM4 1560 aa23.71■■□□□ 1.39
SLC43A3-214ENST00000529554 BAZ1AQ9NRL2 1556 aaPredicted RBP23.71■■□□□ 1.39
SLC43A3-214ENST00000529554 WIZO95785 1651 aa23.69■■□□□ 1.38
SLC43A3-214ENST00000529554 PABPN1Q86U42 306 aaKnown RBP eCLIP23.65■■□□□ 1.38
SLC43A3-214ENST00000529554 SMARCA4P51532 1647 aa23.59■■□□□ 1.37
SLC43A3-214ENST00000529554 TOP2AP11388 1531 aaKnown RBP23.38■■□□□ 1.33
SLC43A3-214ENST00000529554 PEG3Q9GZU2 1588 aa23.22■■□□□ 1.31
SLC43A3-214ENST00000529554 SMARCA2P51531 1590 aa23.2■■□□□ 1.3
SLC43A3-214ENST00000529554 CCDC88BA6NC98 1476 aa23.19■■□□□ 1.3
SLC43A3-214ENST00000529554 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
SLC43A3-214ENST00000529554 EIF4G1Q04637 1599 aaKnown RBP23.15■■□□□ 1.3
SLC43A3-214ENST00000529554 ATAD2BQ9ULI0 1458 aa23.1■■□□□ 1.29
SLC43A3-214ENST00000529554 LOC105371045A0A1W2PR82 267 aa23.02■■□□□ 1.28
SLC43A3-214ENST00000529554 BAZ1BQ9UIG0 1483 aaKnown RBP23■■□□□ 1.27
SLC43A3-214ENST00000529554 ABCC8Q09428 1581 aa22.88■■□□□ 1.25
SLC43A3-214ENST00000529554 FAM9AQ8IZU1 332 aaPredicted RBP22.86■■□□□ 1.25
SLC43A3-214ENST00000529554 NCAPD3P42695 1498 aa22.8■■□□□ 1.24
SLC43A3-214ENST00000529554 HMGXB3Q12766 1538 aa22.79■■□□□ 1.24
SLC43A3-214ENST00000529554 WRNQ14191 1432 aaPredicted RBP eCLIP22.62■■□□□ 1.21
SLC43A3-214ENST00000529554 EHMT2Q96KQ7 1210 aa22.6■■□□□ 1.21
SLC43A3-214ENST00000529554 SYNJ1O43426 1573 aa22.54■■□□□ 1.2
SLC43A3-214ENST00000529554 CC2D2AQ9P2K1 1620 aa22.54■■□□□ 1.2
SLC43A3-214ENST00000529554 SOGA1O94964 1423 aa22.52■■□□□ 1.2
SLC43A3-214ENST00000529554 PCGF6Q9BYE7 350 aa22.45■■□□□ 1.18
SLC43A3-214ENST00000529554 RUSC2Q8N2Y8 1516 aa22.44■■□□□ 1.18
SLC43A3-214ENST00000529554 EEA1Q15075 1411 aa22.43■■□□□ 1.18
SLC43A3-214ENST00000529554 CFTRP13569 1480 aa22.42■■□□□ 1.18
SLC43A3-214ENST00000529554 TOP2BQ02880 1626 aa22.38■■□□□ 1.17
SLC43A3-214ENST00000529554 CSRNP3Q8WYN3 585 aa22.36■■□□□ 1.17
SLC43A3-214ENST00000529554 BIVM-ERCC5R4GMW8 1640 aa22.33■■□□□ 1.17
SLC43A3-214ENST00000529554 PRDM2Q13029 1718 aa22.32■■□□□ 1.16
SLC43A3-214ENST00000529554 CADPSQ9ULU8 1353 aa22.27■■□□□ 1.16
SLC43A3-214ENST00000529554 HRCP23327 699 aa22.27■■□□□ 1.16
SLC43A3-214ENST00000529554 CUX1P39880 1505 aa22.26■■□□□ 1.15
SLC43A3-214ENST00000529554 TNIKQ9UKE5 1360 aa22.2■■□□□ 1.14
SLC43A3-214ENST00000529554 TRIM26Q12899 539 aaPredicted RBP22.2■■□□□ 1.14
SLC43A3-214ENST00000529554 GOLGA3Q08378 1498 aa22.2■■□□□ 1.14
SLC43A3-214ENST00000529554 KIF21BO75037 1637 aa22.16■■□□□ 1.14
SLC43A3-214ENST00000529554 UBTFP17480 764 aaKnown RBP22.15■■□□□ 1.14
SLC43A3-214ENST00000529554 CEP162Q5TB80 1403 aa22.15■■□□□ 1.14
SLC43A3-214ENST00000529554 CEP164Q9UPV0 1460 aa22.15■■□□□ 1.14
SLC43A3-214ENST00000529554 FANCD2Q9BXW9 1451 aa22.05■■□□□ 1.12
SLC43A3-214ENST00000529554 NESP48681 1621 aa22.04■■□□□ 1.12
SLC43A3-214ENST00000529554 RAPGEF2Q9Y4G8 1499 aa22.03■■□□□ 1.12
SLC43A3-214ENST00000529554 KIF27Q86VH2 1401 aa22■■□□□ 1.11
SLC43A3-214ENST00000529554 DNAJC5BQ9UF47 199 aa21.98■■□□□ 1.11
SLC43A3-214ENST00000529554 PPARGC1BQ86YN6 1023 aaKnown RBP21.96■■□□□ 1.11
SLC43A3-214ENST00000529554 LAMC3Q9Y6N6 1575 aa21.96■■□□□ 1.11
SLC43A3-214ENST00000529554 FGD5Q6ZNL6 1462 aa21.95■■□□□ 1.1
SLC43A3-214ENST00000529554 PRXQ9BXM0 1461 aa21.95■■□□□ 1.1
SLC43A3-214ENST00000529554 ERICH3Q5RHP9 1530 aa21.92■■□□□ 1.1
SLC43A3-214ENST00000529554 DNMBPQ6XZF7 1577 aa21.89■■□□□ 1.09
SLC43A3-214ENST00000529554 CUX2O14529 1486 aa21.89■■□□□ 1.09
SLC43A3-214ENST00000529554 CLIP1P30622 1438 aa21.88■■□□□ 1.09
SLC43A3-214ENST00000529554 TOPBP1Q92547 1522 aa21.85■■□□□ 1.09
SLC43A3-214ENST00000529554 IGF1RP08069 1367 aa21.79■■□□□ 1.08
SLC43A3-214ENST00000529554 PDS5BQ9NTI5 1447 aa21.79■■□□□ 1.08
SLC43A3-214ENST00000529554 POLA1P09884 1462 aaPredicted RBP21.78■■□□□ 1.08
SLC43A3-214ENST00000529554 RANGAP1P46060 587 aaPredicted RBP21.78■■□□□ 1.08
SLC43A3-214ENST00000529554 URB2Q14146 1524 aaKnown RBP21.77■■□□□ 1.07
SLC43A3-214ENST00000529554 RAD54L2Q9Y4B4 1467 aa21.77■■□□□ 1.07
SLC43A3-214ENST00000529554 KIF21AQ7Z4S6 1674 aa21.74■■□□□ 1.07
SLC43A3-214ENST00000529554 ABCA10Q8WWZ4 1543 aa21.73■■□□□ 1.07
SLC43A3-214ENST00000529554 VPS8Q8N3P4 1428 aa21.72■■□□□ 1.07
SLC43A3-214ENST00000529554 TTBK1Q5TCY1 1321 aaPredicted RBP21.72■■□□□ 1.07
SLC43A3-214ENST00000529554 CARMIL1Q5VZK9 1371 aa21.68■■□□□ 1.06
SLC43A3-214ENST00000529554 WDR97A6NE52 1622 aa21.63■■□□□ 1.05
SLC43A3-214ENST00000529554 ARAP1Q96P48 1450 aa21.63■■□□□ 1.05
SLC43A3-214ENST00000529554 ZEB1P37275 1124 aaPredicted RBP21.57■■□□□ 1.04
SLC43A3-214ENST00000529554 ARHGAP35Q9NRY4 1499 aa21.55■■□□□ 1.04
SLC43A3-214ENST00000529554 APLP2Q06481 763 aa21.54■■□□□ 1.04
SLC43A3-214ENST00000529554 CUL7Q14999 1698 aa21.53■■□□□ 1.04
SLC43A3-214ENST00000529554 ABCA5Q8WWZ7 1642 aa21.53■■□□□ 1.04
SLC43A3-214ENST00000529554 TDRD9Q8NDG6 1382 aaKnown RBP21.52■■□□□ 1.04
SLC43A3-214ENST00000529554 MRC2Q9UBG0 1479 aa21.5■■□□□ 1.03
SLC43A3-214ENST00000529554 TARBP1Q13395 1621 aaKnown RBP21.49■■□□□ 1.03
SLC43A3-214ENST00000529554 GAPVD1Q14C86 1478 aa21.48■■□□□ 1.03
SLC43A3-214ENST00000529554 CTTNBP2Q8WZ74 1663 aa21.39■■□□□ 1.01
SLC43A3-214ENST00000529554 WDR62O43379 1518 aa21.36■■□□□ 1.01
SLC43A3-214ENST00000529554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.36■■□□□ 1.01
SLC43A3-214ENST00000529554 KANK4Q5T7N3 995 aaPredicted RBP21.34■■□□□ 1.01
SLC43A3-214ENST00000529554 PBRM1Q86U86 1689 aa21.33■■□□□ 1.01
SLC43A3-214ENST00000529554 AQRO60306 1485 aaKnown RBP eCLIP21.31■■□□□ 11e-7■■■■■ 31.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms