RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 NISCHQ9Y2I1 1504 aa33.02■■■□□ 2.88
CLCC1-202ENST00000348264 CCDC180Q9P1Z9 1646 aa29.53■■■□□ 2.32
CLCC1-202ENST00000348264 ABCC9O60706 1549 aa29.19■■■□□ 2.26
CLCC1-202ENST00000348264 RB1CC1Q8TDY2 1594 aa27.92■■■□□ 2.06
CLCC1-202ENST00000348264 NACADO15069 1562 aa27.8■■■□□ 2.04
CLCC1-202ENST00000348264 DCAF8L2P0C7V8 631 aa27.62■■■□□ 2.01
CLCC1-202ENST00000348264 MYO15BQ96JP2 1530 aa27.52■■■□□ 2
CLCC1-202ENST00000348264 ZCCHC6Q5VYS8 1495 aaKnown RBP27.46■■□□□ 1.99
CLCC1-202ENST00000348264 UNC13AQ9UPW8 1703 aa27.38■■□□□ 1.97
CLCC1-202ENST00000348264 DCAF1Q9Y4B6 1507 aa27.29■■□□□ 1.96
CLCC1-202ENST00000348264 PABPN1Q86U42 306 aaKnown RBP eCLIP27.18■■□□□ 1.94
CLCC1-202ENST00000348264 BICRAQ9NZM4 1560 aa27.14■■□□□ 1.93
CLCC1-202ENST00000348264 DNAJC5BQ9UF47 199 aa27.07■■□□□ 1.92
CLCC1-202ENST00000348264 SCRIBQ14160 1630 aa26.94■■□□□ 1.9
CLCC1-202ENST00000348264 SHROOM4Q9ULL8 1493 aa26.77■■□□□ 1.88
CLCC1-202ENST00000348264 EIF4G1Q04637 1599 aaKnown RBP26.42■■□□□ 1.82
CLCC1-202ENST00000348264 CC2D2AQ9P2K1 1620 aa26.41■■□□□ 1.82
CLCC1-202ENST00000348264 CECR2Q9BXF3 1484 aa26.25■■□□□ 1.79
CLCC1-202ENST00000348264 SMARCA4P51532 1647 aa25.72■■□□□ 1.71
CLCC1-202ENST00000348264 NCAPD3P42695 1498 aa25.64■■□□□ 1.69
CLCC1-202ENST00000348264 ATAD2BQ9ULI0 1458 aa25.63■■□□□ 1.69
CLCC1-202ENST00000348264 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
CLCC1-202ENST00000348264 SMARCA2P51531 1590 aa25.58■■□□□ 1.69
CLCC1-202ENST00000348264 HMGXB3Q12766 1538 aa25.53■■□□□ 1.68
CLCC1-202ENST00000348264 MROH2BQ7Z745 1585 aa25.46■■□□□ 1.67
CLCC1-202ENST00000348264 PEG3Q9GZU2 1588 aa25.46■■□□□ 1.67
CLCC1-202ENST00000348264 BAZ1BQ9UIG0 1483 aaKnown RBP25.4■■□□□ 1.66
CLCC1-202ENST00000348264 WIZO95785 1651 aa25.19■■□□□ 1.62
CLCC1-202ENST00000348264 NESP48681 1621 aa25.19■■□□□ 1.62
CLCC1-202ENST00000348264 ERCC6Q03468 1493 aa25.16■■□□□ 1.62
CLCC1-202ENST00000348264 LAMC3Q9Y6N6 1575 aa25.04■■□□□ 1.6
CLCC1-202ENST00000348264 RSF1Q96T23 1441 aaPredicted RBP25.03■■□□□ 1.6
CLCC1-202ENST00000348264 CUX2O14529 1486 aa25.02■■□□□ 1.6
CLCC1-202ENST00000348264 KIF21AQ7Z4S6 1674 aa24.91■■□□□ 1.58
CLCC1-202ENST00000348264 THOC2Q8NI27 1593 aaKnown RBP24.91■■□□□ 1.58
CLCC1-202ENST00000348264 TOP2AP11388 1531 aaKnown RBP24.88■■□□□ 1.57
CLCC1-202ENST00000348264 CADPSQ9ULU8 1353 aa24.86■■□□□ 1.57
CLCC1-202ENST00000348264 PDS5BQ9NTI5 1447 aa24.84■■□□□ 1.57
CLCC1-202ENST00000348264 CFTRP13569 1480 aa24.67■■□□□ 1.54
CLCC1-202ENST00000348264 MRC2Q9UBG0 1479 aa24.65■■□□□ 1.54
CLCC1-202ENST00000348264 FANCD2Q9BXW9 1451 aa24.62■■□□□ 1.53
CLCC1-202ENST00000348264 CEP164Q9UPV0 1460 aa24.61■■□□□ 1.53
CLCC1-202ENST00000348264 WDR62O43379 1518 aa24.61■■□□□ 1.53
CLCC1-202ENST00000348264 DNAJC5Q9H3Z4 198 aa24.58■■□□□ 1.53
CLCC1-202ENST00000348264 CCDC88BA6NC98 1476 aa24.57■■□□□ 1.52
CLCC1-202ENST00000348264 PRDM2Q13029 1718 aa24.55■■□□□ 1.52
CLCC1-202ENST00000348264 URB2Q14146 1524 aaKnown RBP24.42■■□□□ 1.5
CLCC1-202ENST00000348264 TOPBP1Q92547 1522 aa24.2■■□□□ 1.46
CLCC1-202ENST00000348264 DNMBPQ6XZF7 1577 aa24.15■■□□□ 1.46
CLCC1-202ENST00000348264 ABCC8Q09428 1581 aa24.11■■□□□ 1.45
CLCC1-202ENST00000348264 IFT140Q96RY7 1462 aa24.1■■□□□ 1.45
CLCC1-202ENST00000348264 SUPT5HO00267 1087 aaKnown RBP24.09■■□□□ 1.45
CLCC1-202ENST00000348264 ZNF608Q9ULD9 1512 aaPredicted RBP24.06■■□□□ 1.44
CLCC1-202ENST00000348264 POLA1P09884 1462 aaPredicted RBP23.98■■□□□ 1.43
CLCC1-202ENST00000348264 EIF4G3O43432 1585 aaKnown RBP23.98■■□□□ 1.43
CLCC1-202ENST00000348264 TARBP1Q13395 1621 aaKnown RBP23.98■■□□□ 1.43
CLCC1-202ENST00000348264 CUX1P39880 1505 aa23.91■■□□□ 1.42
CLCC1-202ENST00000348264 RAD54L2Q9Y4B4 1467 aa23.87■■□□□ 1.41
CLCC1-202ENST00000348264 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
CLCC1-202ENST00000348264 AQRO60306 1485 aaKnown RBP eCLIP23.85■■□□□ 1.411e-10■■■■■ 41.1
CLCC1-202ENST00000348264 OSCARQ8IYS5 282 aa23.84■■□□□ 1.41
CLCC1-202ENST00000348264 SOGA1O94964 1423 aa23.81■■□□□ 1.4
CLCC1-202ENST00000348264 CHD1O14646 1710 aa23.76■■□□□ 1.39
CLCC1-202ENST00000348264 WDR97A6NE52 1622 aa23.74■■□□□ 1.39
CLCC1-202ENST00000348264 TDRD9Q8NDG6 1382 aaKnown RBP23.74■■□□□ 1.39
CLCC1-202ENST00000348264 TRIM41Q8WV44 630 aa23.65■■□□□ 1.38
CLCC1-202ENST00000348264 SNAPC4Q5SXM2 1469 aa23.64■■□□□ 1.38
CLCC1-202ENST00000348264 RIMBP3CA6NJZ7 1639 aa23.62■■□□□ 1.37
CLCC1-202ENST00000348264 RIMBP3BA6NNM3 1639 aa23.62■■□□□ 1.37
CLCC1-202ENST00000348264 RIMBP3Q9UFD9 1639 aa23.62■■□□□ 1.37
CLCC1-202ENST00000348264 BIVM-ERCC5R4GMW8 1640 aa23.62■■□□□ 1.37
CLCC1-202ENST00000348264 SYNJ1O43426 1573 aa23.61■■□□□ 1.37
CLCC1-202ENST00000348264 ABCA10Q8WWZ4 1543 aa23.61■■□□□ 1.37
CLCC1-202ENST00000348264 TOP2BQ02880 1626 aa23.61■■□□□ 1.37
CLCC1-202ENST00000348264 PBRM1Q86U86 1689 aa23.6■■□□□ 1.37
CLCC1-202ENST00000348264 GRIN2BQ13224 1484 aa23.6■■□□□ 1.37
CLCC1-202ENST00000348264 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
CLCC1-202ENST00000348264 ABCA5Q8WWZ7 1642 aa23.59■■□□□ 1.37
CLCC1-202ENST00000348264 MAGI1Q96QZ7 1491 aaPredicted RBP23.58■■□□□ 1.37
CLCC1-202ENST00000348264 FBLN2P98095 1184 aa23.57■■□□□ 1.36
CLCC1-202ENST00000348264 ARHGEF11O15085 1522 aa23.57■■□□□ 1.36
CLCC1-202ENST00000348264 GAPVD1Q14C86 1478 aa23.56■■□□□ 1.36
CLCC1-202ENST00000348264 SYNJ2O15056 1496 aa23.49■■□□□ 1.35
CLCC1-202ENST00000348264 CLASP1Q7Z460 1538 aa23.46■■□□□ 1.35
CLCC1-202ENST00000348264 CHMP7Q8WUX9 453 aaPredicted RBP23.45■■□□□ 1.34
CLCC1-202ENST00000348264 ADAMTS12P58397 1594 aa23.39■■□□□ 1.33
CLCC1-202ENST00000348264 ARAP1Q96P48 1450 aa23.36■■□□□ 1.33
CLCC1-202ENST00000348264 ERICH3Q5RHP9 1530 aa23.32■■□□□ 1.32
CLCC1-202ENST00000348264 GRIN2AQ12879 1464 aa23.31■■□□□ 1.32
CLCC1-202ENST00000348264 CYB5RLQ6IPT4 315 aa23.28■■□□□ 1.32
CLCC1-202ENST00000348264 FHAD1B1AJZ9 1412 aa23.26■■□□□ 1.31
CLCC1-202ENST00000348264 CEP170Q5SW79 1584 aa23.25■■□□□ 1.31
CLCC1-202ENST00000348264 NUP160Q12769 1436 aa23.23■■□□□ 1.31
CLCC1-202ENST00000348264 ERCC6L2Q5T890 1561 aa23.13■■□□□ 1.29
CLCC1-202ENST00000348264 SHROOM2Q13796 1616 aa23.12■■□□□ 1.29
CLCC1-202ENST00000348264 KIF27Q86VH2 1401 aa23.1■■□□□ 1.29
CLCC1-202ENST00000348264 CUL7Q14999 1698 aa23.06■■□□□ 1.28
CLCC1-202ENST00000348264 RUSC2Q8N2Y8 1516 aa23.06■■□□□ 1.28
CLCC1-202ENST00000348264 IGF1RP08069 1367 aa23.05■■□□□ 1.28
CLCC1-202ENST00000348264 PRG4Q92954 1404 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms