RNA–Protein interactions for RNA: ENST00000547444.1

SLC25A3-205, Transcript of solute carrier family 25 member 3, humanhuman

TSL 1 (best)

Gene SLC25A3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A3-205ENST00000547444 AEBP2Q6ZN18 517 aaPredicted RBP29.9■■■□□ 2.38
SLC25A3-205ENST00000547444 CHIC1Q5VXU3 224 aa27.96■■■□□ 2.07
SLC25A3-205ENST00000547444 SENP3Q9H4L4 574 aaPredicted RBP25.62■■□□□ 1.69
SLC25A3-205ENST00000547444 PHF23Q9BUL5 403 aaPredicted RBP25.21■■□□□ 1.63
SLC25A3-205ENST00000547444 FOXD1Q16676 465 aa23.95■■□□□ 1.42
SLC25A3-205ENST00000547444 POTEDQ86YR6 584 aa23.14■■□□□ 1.29
SLC25A3-205ENST00000547444 MSH5O43196 834 aa22.65■■□□□ 1.22
SLC25A3-205ENST00000547444 PIAS4Q8N2W9 510 aaPredicted RBP22.26■■□□□ 1.15
SLC25A3-205ENST00000547444 PLPPR3Q6T4P5 718 aa21.96■■□□□ 1.11
SLC25A3-205ENST00000547444 PPP6R1Q9UPN7 881 aa21.92■■□□□ 1.1
SLC25A3-205ENST00000547444 ADRA2BP18089 450 aa21.84■■□□□ 1.09
SLC25A3-205ENST00000547444 NISCHQ9Y2I1 1504 aa20.4■□□□□ 0.86
SLC25A3-205ENST00000547444 MAPK8IP2Q13387 824 aaPredicted RBP20.24■□□□□ 0.83
SLC25A3-205ENST00000547444 DMRT2Q9Y5R5 561 aa20.21■□□□□ 0.83
SLC25A3-205ENST00000547444 SCAF1Q9H7N4 1312 aaKnown RBP19.99■□□□□ 0.79
SLC25A3-205ENST00000547444 CACNB1Q02641 598 aaPredicted RBP19.84■□□□□ 0.77
SLC25A3-205ENST00000547444 DCAF8L1A6NGE4 600 aa19.5■□□□□ 0.71
SLC25A3-205ENST00000547444 RNF39Q9H2S5 420 aa19.26■□□□□ 0.67
SLC25A3-205ENST00000547444 HOXD11P31277 338 aaPredicted RBP19.21■□□□□ 0.67
SLC25A3-205ENST00000547444 PPP4R3CPQ6ZMV5 832 aa19.18■□□□□ 0.66
SLC25A3-205ENST00000547444 C1QBPQ07021 282 aaKnown RBP18.95■□□□□ 0.62
SLC25A3-205ENST00000547444 CNKSR2Q8WXI2 1034 aa18.95■□□□□ 0.62
SLC25A3-205ENST00000547444 RNF216Q9NWF9 866 aaPredicted RBP18.92■□□□□ 0.62
SLC25A3-205ENST00000547444 DNAJC5BQ9UF47 199 aa18.64■□□□□ 0.57
SLC25A3-205ENST00000547444 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.38■□□□□ 0.53
SLC25A3-205ENST00000547444 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.52
SLC25A3-205ENST00000547444 CCDC180Q9P1Z9 1646 aa18.27■□□□□ 0.51
SLC25A3-205ENST00000547444 POTEHQ6S545 545 aa18.02■□□□□ 0.48
SLC25A3-205ENST00000547444 NPM3O75607 178 aaKnown RBP17.98■□□□□ 0.47
SLC25A3-205ENST00000547444 U3KPZ7 1027 aaPredicted RBP17.88■□□□□ 0.45
SLC25A3-205ENST00000547444 CAPN15O75808 1086 aa17.85■□□□□ 0.45
SLC25A3-205ENST00000547444 DSG3P32926 999 aa17.84■□□□□ 0.45
SLC25A3-205ENST00000547444 SPINK5Q9NQ38 1064 aaPredicted RBP17.82■□□□□ 0.44
SLC25A3-205ENST00000547444 ABCC9O60706 1549 aa17.64■□□□□ 0.41
SLC25A3-205ENST00000547444 TRHP20396 242 aaPredicted RBP17.42■□□□□ 0.38
SLC25A3-205ENST00000547444 ABCB7O75027 752 aa17.38■□□□□ 0.37
SLC25A3-205ENST00000547444 APLP2Q06481 763 aa17.34■□□□□ 0.37
SLC25A3-205ENST00000547444 ZNF219Q9P2Y4 722 aaPredicted RBP17.33■□□□□ 0.36
SLC25A3-205ENST00000547444 SLC4A2P04920 1241 aa17.32■□□□□ 0.36
SLC25A3-205ENST00000547444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.17■□□□□ 0.34
SLC25A3-205ENST00000547444 HNRNPUL2Q1KMD3 747 aaKnown RBP17.17■□□□□ 0.34
SLC25A3-205ENST00000547444 KCNA4P22459 653 aa17.11■□□□□ 0.33
SLC25A3-205ENST00000547444 RB1CC1Q8TDY2 1594 aa17.11■□□□□ 0.33
SLC25A3-205ENST00000547444 NACADO15069 1562 aa17.09■□□□□ 0.33
SLC25A3-205ENST00000547444 SAMD1Q6SPF0 538 aaPredicted RBP17.05■□□□□ 0.32
SLC25A3-205ENST00000547444 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
SLC25A3-205ENST00000547444 MYO15BQ96JP2 1530 aa17.01■□□□□ 0.31
SLC25A3-205ENST00000547444 ZCCHC6Q5VYS8 1495 aaKnown RBP17■□□□□ 0.31
SLC25A3-205ENST00000547444 DCAF1Q9Y4B6 1507 aa16.94■□□□□ 0.3
SLC25A3-205ENST00000547444 CHRDL2Q6WN34 429 aa16.92■□□□□ 0.3
SLC25A3-205ENST00000547444 DCAF8L2P0C7V8 631 aa16.89■□□□□ 0.29
SLC25A3-205ENST00000547444 UNC13AQ9UPW8 1703 aa16.82■□□□□ 0.28
SLC25A3-205ENST00000547444 POLA2Q14181 598 aa16.79■□□□□ 0.28
SLC25A3-205ENST00000547444 MYCNP04198 464 aaPredicted RBP16.66■□□□□ 0.26
SLC25A3-205ENST00000547444 SP7Q8TDD2 431 aaPredicted RBP16.61■□□□□ 0.25
SLC25A3-205ENST00000547444 BICRAQ9NZM4 1560 aa16.55■□□□□ 0.24
SLC25A3-205ENST00000547444 SCRIBQ14160 1630 aa16.54■□□□□ 0.24
SLC25A3-205ENST00000547444 AKT1S1Q96B36 256 aa16.52■□□□□ 0.24
SLC25A3-205ENST00000547444 SHROOM4Q9ULL8 1493 aa16.44■□□□□ 0.22
SLC25A3-205ENST00000547444 PABPN1Q86U42 306 aaKnown RBP eCLIP16.41■□□□□ 0.22
SLC25A3-205ENST00000547444 PIP4P2Q8N4L2 257 aa16.39■□□□□ 0.21
SLC25A3-205ENST00000547444 ZBTB12Q9Y330 459 aaPredicted RBP16.39■□□□□ 0.21
SLC25A3-205ENST00000547444 REM2Q8IYK8 340 aaPredicted RBP16.38■□□□□ 0.21
SLC25A3-205ENST00000547444 ATF5Q9Y2D1 282 aaPredicted RBP16.31■□□□□ 0.2
SLC25A3-205ENST00000547444 HAX1O00165 279 aa16.29■□□□□ 0.2
SLC25A3-205ENST00000547444 OSCARQ8IYS5 282 aa16.28■□□□□ 0.2
SLC25A3-205ENST00000547444 PITPNM1O00562 1244 aa16.21■□□□□ 0.19
SLC25A3-205ENST00000547444 FXR2P51116 673 aaKnown RBP eCLIP16.17■□□□□ 0.18
SLC25A3-205ENST00000547444 FOXD4L1Q9NU39 408 aa16.16■□□□□ 0.18
SLC25A3-205ENST00000547444 EIF4G1Q04637 1599 aaKnown RBP16.11■□□□□ 0.17
SLC25A3-205ENST00000547444 SLC4A1APQ9BWU0 796 aaKnown RBP16.05■□□□□ 0.16
SLC25A3-205ENST00000547444 CC2D2AQ9P2K1 1620 aa16.05■□□□□ 0.16
SLC25A3-205ENST00000547444 EVX2Q03828 476 aa16■□□□□ 0.15
SLC25A3-205ENST00000547444 CECR2Q9BXF3 1484 aa15.87■□□□□ 0.13
SLC25A3-205ENST00000547444 SMARCA4P51532 1647 aa15.86■□□□□ 0.13
SLC25A3-205ENST00000547444 BAZ1AQ9NRL2 1556 aaPredicted RBP15.84■□□□□ 0.13
SLC25A3-205ENST00000547444 SPDYE2BA6NHP3 402 aa15.83■□□□□ 0.12
SLC25A3-205ENST00000547444 SPDYE6P0CI01 402 aa15.83■□□□□ 0.12
SLC25A3-205ENST00000547444 SPDYE2Q495Y8 402 aa15.83■□□□□ 0.12
SLC25A3-205ENST00000547444 PRKAR2AP13861 404 aaKnown RBP15.8■□□□□ 0.12
SLC25A3-205ENST00000547444 FBLN2P98095 1184 aa15.76■□□□□ 0.11
SLC25A3-205ENST00000547444 CLEC11AQ9Y240 323 aa15.76■□□□□ 0.11
SLC25A3-205ENST00000547444 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
SLC25A3-205ENST00000547444 PEG3Q9GZU2 1588 aa15.73■□□□□ 0.11
SLC25A3-205ENST00000547444 SPDYE1Q8NFV5 336 aaPredicted RBP15.72■□□□□ 0.11
SLC25A3-205ENST00000547444 NCAPD3P42695 1498 aa15.71■□□□□ 0.1
SLC25A3-205ENST00000547444 HMGXB3Q12766 1538 aa15.7■□□□□ 0.1
SLC25A3-205ENST00000547444 ZBTB22O15209 634 aa15.7■□□□□ 0.1
SLC25A3-205ENST00000547444 ATXN8OSP0DMR3 200 aa15.7■□□□□ 0.1
SLC25A3-205ENST00000547444 ATAD2BQ9ULI0 1458 aa15.7■□□□□ 0.1
SLC25A3-205ENST00000547444 MROH2BQ7Z745 1585 aa15.69■□□□□ 0.1
SLC25A3-205ENST00000547444 C19orf67A6NJJ6 358 aa15.68■□□□□ 0.1
SLC25A3-205ENST00000547444 GABBR2O75899 941 aa15.61■□□□□ 0.09
SLC25A3-205ENST00000547444 BAZ1BQ9UIG0 1483 aaKnown RBP15.59■□□□□ 0.09
SLC25A3-205ENST00000547444 WIZO95785 1651 aa15.58■□□□□ 0.08
SLC25A3-205ENST00000547444 LHX8Q68G74 356 aa15.58■□□□□ 0.08
SLC25A3-205ENST00000547444 ZNF692Q9BU19 519 aaPredicted RBP15.57■□□□□ 0.08
SLC25A3-205ENST00000547444 SSUH2Q9Y2M2 353 aa15.53■□□□□ 0.08
SLC25A3-205ENST00000547444 MKRN4PQ13434 485 aaPredicted RBP15.52■□□□□ 0.08
SLC25A3-205ENST00000547444 CHADLQ6NUI6 762 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms