RNA–Protein interactions for RNA: ENST00000306823.10

GPS1-201, Transcript of G protein pathway suppressor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPS1, Length 1,842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPS1-201ENST00000306823 NISCHQ9Y2I1 1504 aa39.49■■■■□ 3.91
GPS1-201ENST00000306823 CCDC180Q9P1Z9 1646 aa33.98■■■■□ 3.03
GPS1-201ENST00000306823 ZCCHC6Q5VYS8 1495 aaKnown RBP33.28■■■□□ 2.92
GPS1-201ENST00000306823 SHROOM4Q9ULL8 1493 aa32.82■■■□□ 2.84
GPS1-201ENST00000306823 DCAF1Q9Y4B6 1507 aa32.58■■■□□ 2.81
GPS1-201ENST00000306823 DCAF8L2P0C7V8 631 aa32.56■■■□□ 2.8
GPS1-201ENST00000306823 MYO15BQ96JP2 1530 aa31.93■■■□□ 2.7
GPS1-201ENST00000306823 SUPT5HO00267 1087 aaKnown RBP31.91■■■□□ 2.7
GPS1-201ENST00000306823 ABCC9O60706 1549 aa31.75■■■□□ 2.67
GPS1-201ENST00000306823 NACADO15069 1562 aa31.56■■■□□ 2.64
GPS1-201ENST00000306823 SCRIBQ14160 1630 aa31.48■■■□□ 2.63
GPS1-201ENST00000306823 RB1CC1Q8TDY2 1594 aa31.13■■■□□ 2.57
GPS1-201ENST00000306823 RSF1Q96T23 1441 aaPredicted RBP30.95■■■□□ 2.54
GPS1-201ENST00000306823 CHIC1Q5VXU3 224 aa30.89■■■□□ 2.53
GPS1-201ENST00000306823 CECR2Q9BXF3 1484 aa30.72■■■□□ 2.51
GPS1-201ENST00000306823 MROH2BQ7Z745 1585 aa30.59■■■□□ 2.49
GPS1-201ENST00000306823 UNC13AQ9UPW8 1703 aa30.54■■■□□ 2.48
GPS1-201ENST00000306823 BAZ1AQ9NRL2 1556 aaPredicted RBP30.38■■■□□ 2.45
GPS1-201ENST00000306823 WIZO95785 1651 aa30.34■■■□□ 2.45
GPS1-201ENST00000306823 BICRAQ9NZM4 1560 aa30.27■■■□□ 2.44
GPS1-201ENST00000306823 SMARCA4P51532 1647 aa30.18■■■□□ 2.42
GPS1-201ENST00000306823 PABPN1Q86U42 306 aaKnown RBP eCLIP30.17■■■□□ 2.422e-7■■■□□ 16.2
GPS1-201ENST00000306823 TOP2AP11388 1531 aaKnown RBP29.98■■■□□ 2.39
GPS1-201ENST00000306823 TRIM41Q8WV44 630 aa29.9■■■□□ 2.38
GPS1-201ENST00000306823 LOC105371045A0A1W2PR82 267 aa29.8■■■□□ 2.36
GPS1-201ENST00000306823 CCDC88BA6NC98 1476 aa29.78■■■□□ 2.36
GPS1-201ENST00000306823 EIF4G1Q04637 1599 aaKnown RBP29.77■■■□□ 2.36
GPS1-201ENST00000306823 PEG3Q9GZU2 1588 aa29.77■■■□□ 2.36
GPS1-201ENST00000306823 SMARCA2P51531 1590 aa29.75■■■□□ 2.35
GPS1-201ENST00000306823 ATAD2BQ9ULI0 1458 aa29.58■■■□□ 2.33
GPS1-201ENST00000306823 FAM9AQ8IZU1 332 aaPredicted RBP29.44■■■□□ 2.3
GPS1-201ENST00000306823 BAZ1BQ9UIG0 1483 aaKnown RBP29.42■■■□□ 2.3
GPS1-201ENST00000306823 ABCC8Q09428 1581 aa29.36■■■□□ 2.29
GPS1-201ENST00000306823 NCAPD3P42695 1498 aa29.2■■■□□ 2.26
GPS1-201ENST00000306823 HMGXB3Q12766 1538 aa29.13■■■□□ 2.25
GPS1-201ENST00000306823 PCGF6Q9BYE7 350 aa29.08■■■□□ 2.25
GPS1-201ENST00000306823 WRNQ14191 1432 aaPredicted RBP eCLIP29.07■■■□□ 2.24
GPS1-201ENST00000306823 EHMT2Q96KQ7 1210 aa29.05■■■□□ 2.24
GPS1-201ENST00000306823 SOGA1O94964 1423 aa29■■■□□ 2.23
GPS1-201ENST00000306823 EEA1Q15075 1411 aa28.94■■■□□ 2.22
GPS1-201ENST00000306823 SYNJ1O43426 1573 aa28.92■■■□□ 2.22
GPS1-201ENST00000306823 RUSC2Q8N2Y8 1516 aa28.87■■■□□ 2.21
GPS1-201ENST00000306823 TRIM26Q12899 539 aaPredicted RBP28.86■■■□□ 2.21
GPS1-201ENST00000306823 CSRNP3Q8WYN3 585 aa28.84■■■□□ 2.21
GPS1-201ENST00000306823 HRCP23327 699 aa28.75■■■□□ 2.19
GPS1-201ENST00000306823 CFTRP13569 1480 aa28.74■■■□□ 2.19
GPS1-201ENST00000306823 TOP2BQ02880 1626 aa28.71■■■□□ 2.19
GPS1-201ENST00000306823 TNIKQ9UKE5 1360 aa28.69■■■□□ 2.18
GPS1-201ENST00000306823 CC2D2AQ9P2K1 1620 aa28.69■■■□□ 2.18
GPS1-201ENST00000306823 BIVM-ERCC5R4GMW8 1640 aa28.64■■■□□ 2.17
GPS1-201ENST00000306823 GOLGA3Q08378 1498 aa28.59■■■□□ 2.17
GPS1-201ENST00000306823 CEP162Q5TB80 1403 aa28.57■■■□□ 2.16
GPS1-201ENST00000306823 CUX1P39880 1505 aa28.53■■■□□ 2.16
GPS1-201ENST00000306823 UBTFP17480 764 aaKnown RBP28.53■■■□□ 2.16
GPS1-201ENST00000306823 CEP164Q9UPV0 1460 aa28.53■■■□□ 2.16
GPS1-201ENST00000306823 CADPSQ9ULU8 1353 aa28.52■■■□□ 2.16
GPS1-201ENST00000306823 KIF21BO75037 1637 aa28.52■■■□□ 2.16
GPS1-201ENST00000306823 PRDM2Q13029 1718 aa28.46■■■□□ 2.15
GPS1-201ENST00000306823 PPARGC1BQ86YN6 1023 aaKnown RBP28.35■■■□□ 2.13
GPS1-201ENST00000306823 RAPGEF2Q9Y4G8 1499 aa28.34■■■□□ 2.13
GPS1-201ENST00000306823 PRXQ9BXM0 1461 aa28.26■■■□□ 2.11
GPS1-201ENST00000306823 KIF27Q86VH2 1401 aa28.26■■■□□ 2.11
GPS1-201ENST00000306823 ERICH3Q5RHP9 1530 aa28.21■■■□□ 2.11
GPS1-201ENST00000306823 CLIP1P30622 1438 aa28.2■■■□□ 2.11
GPS1-201ENST00000306823 FANCD2Q9BXW9 1451 aa28.19■■■□□ 2.1
GPS1-201ENST00000306823 FGD5Q6ZNL6 1462 aa28.11■■■□□ 2.09
GPS1-201ENST00000306823 NESP48681 1621 aa28.1■■■□□ 2.09
GPS1-201ENST00000306823 DNAJC5BQ9UF47 199 aa28.1■■■□□ 2.09
GPS1-201ENST00000306823 CUX2O14529 1486 aa28.06■■■□□ 2.08
GPS1-201ENST00000306823 VPS8Q8N3P4 1428 aa28.04■■■□□ 2.08
GPS1-201ENST00000306823 IGF1RP08069 1367 aa28.02■■■□□ 2.08
GPS1-201ENST00000306823 LAMC3Q9Y6N6 1575 aa28.02■■■□□ 2.08
GPS1-201ENST00000306823 DNMBPQ6XZF7 1577 aa28■■■□□ 2.07
GPS1-201ENST00000306823 ZEB1P37275 1124 aaPredicted RBP27.99■■■□□ 2.07
GPS1-201ENST00000306823 TOPBP1Q92547 1522 aa27.96■■■□□ 2.07
GPS1-201ENST00000306823 TTBK1Q5TCY1 1321 aaPredicted RBP27.96■■■□□ 2.07
GPS1-201ENST00000306823 RANGAP1P46060 587 aaPredicted RBP27.94■■■□□ 2.06
GPS1-201ENST00000306823 POLA1P09884 1462 aaPredicted RBP27.88■■■□□ 2.05
GPS1-201ENST00000306823 CARMIL1Q5VZK9 1371 aa27.86■■■□□ 2.05
GPS1-201ENST00000306823 ABCA10Q8WWZ4 1543 aa27.86■■■□□ 2.05
GPS1-201ENST00000306823 ARAP1Q96P48 1450 aa27.85■■■□□ 2.05
GPS1-201ENST00000306823 RAD54L2Q9Y4B4 1467 aa27.85■■■□□ 2.05
GPS1-201ENST00000306823 PDS5BQ9NTI5 1447 aa27.84■■■□□ 2.05
GPS1-201ENST00000306823 URB2Q14146 1524 aaKnown RBP27.82■■■□□ 2.04
GPS1-201ENST00000306823 APLP2Q06481 763 aa27.78■■■□□ 2.04
GPS1-201ENST00000306823 ARHGAP35Q9NRY4 1499 aa27.73■■■□□ 2.03
GPS1-201ENST00000306823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.69■■■□□ 2.02
GPS1-201ENST00000306823 KIF21AQ7Z4S6 1674 aa27.65■■■□□ 2.02
GPS1-201ENST00000306823 WDR97A6NE52 1622 aa27.64■■■□□ 2.01
GPS1-201ENST00000306823 CCER1Q8TC90 406 aaPredicted RBP27.61■■■□□ 2.01
GPS1-201ENST00000306823 CUL7Q14999 1698 aa27.58■■■□□ 2.01
GPS1-201ENST00000306823 TDRD9Q8NDG6 1382 aaKnown RBP27.54■■■□□ 2
GPS1-201ENST00000306823 ABCA5Q8WWZ7 1642 aa27.53■■■□□ 2
GPS1-201ENST00000306823 KANK4Q5T7N3 995 aaPredicted RBP27.53■■■□□ 2
GPS1-201ENST00000306823 GAPVD1Q14C86 1478 aa27.5■■□□□ 1.99
GPS1-201ENST00000306823 TARBP1Q13395 1621 aaKnown RBP27.46■■□□□ 1.99
GPS1-201ENST00000306823 HNRNPUL2Q1KMD3 747 aaKnown RBP27.44■■□□□ 1.98
GPS1-201ENST00000306823 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
GPS1-201ENST00000306823 MAP3K1Q13233 1512 aa27.39■■□□□ 1.97
GPS1-201ENST00000306823 FHAD1B1AJZ9 1412 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 362.1 ms