RNA–Protein interactions for RNA: ENST00000599720.5

KCNN4-205, Transcript of potassium calcium-activated channel subfamily N member 4, humanhuman

TSL 5

Gene KCNN4, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4-205ENST00000599720 NISCHQ9Y2I1 1504 aa42.42■■■■■ 4.38
KCNN4-205ENST00000599720 CCDC180Q9P1Z9 1646 aa37.8■■■■□ 3.64
KCNN4-205ENST00000599720 ABCC9O60706 1549 aa36.86■■■■□ 3.49
KCNN4-205ENST00000599720 RB1CC1Q8TDY2 1594 aa35.56■■■■□ 3.28
KCNN4-205ENST00000599720 NACADO15069 1562 aa35.51■■■■□ 3.28
KCNN4-205ENST00000599720 DCAF8L2P0C7V8 631 aa35.44■■■■□ 3.26
KCNN4-205ENST00000599720 ZCCHC6Q5VYS8 1495 aaKnown RBP35.34■■■■□ 3.25
KCNN4-205ENST00000599720 MYO15BQ96JP2 1530 aa35.29■■■■□ 3.24
KCNN4-205ENST00000599720 DCAF1Q9Y4B6 1507 aa35.14■■■■□ 3.22
KCNN4-205ENST00000599720 UNC13AQ9UPW8 1703 aa34.75■■■■□ 3.15
KCNN4-205ENST00000599720 SCRIBQ14160 1630 aa34.42■■■■□ 3.1
KCNN4-205ENST00000599720 PABPN1Q86U42 306 aaKnown RBP eCLIP34.41■■■■□ 3.1
KCNN4-205ENST00000599720 BICRAQ9NZM4 1560 aa34.39■■■■□ 3.1
KCNN4-205ENST00000599720 SHROOM4Q9ULL8 1493 aa34.14■■■■□ 3.06
KCNN4-205ENST00000599720 DNAJC5BQ9UF47 199 aa33.72■■■□□ 2.99
KCNN4-205ENST00000599720 EIF4G1Q04637 1599 aaKnown RBP33.52■■■□□ 2.96
KCNN4-205ENST00000599720 CC2D2AQ9P2K1 1620 aa33.39■■■□□ 2.93
KCNN4-205ENST00000599720 CECR2Q9BXF3 1484 aa33.14■■■□□ 2.9
KCNN4-205ENST00000599720 SMARCA4P51532 1647 aa32.94■■■□□ 2.86
KCNN4-205ENST00000599720 BAZ1AQ9NRL2 1556 aaPredicted RBP32.92■■■□□ 2.86
KCNN4-205ENST00000599720 SMARCA2P51531 1590 aa32.76■■■□□ 2.84
KCNN4-205ENST00000599720 NCAPD3P42695 1498 aa32.72■■■□□ 2.83
KCNN4-205ENST00000599720 ATAD2BQ9ULI0 1458 aa32.72■■■□□ 2.83
KCNN4-205ENST00000599720 MROH2BQ7Z745 1585 aa32.66■■■□□ 2.82
KCNN4-205ENST00000599720 PEG3Q9GZU2 1588 aa32.62■■■□□ 2.81
KCNN4-205ENST00000599720 HMGXB3Q12766 1538 aa32.6■■■□□ 2.81
KCNN4-205ENST00000599720 BAZ1BQ9UIG0 1483 aaKnown RBP32.49■■■□□ 2.79
KCNN4-205ENST00000599720 WIZO95785 1651 aa32.35■■■□□ 2.77
KCNN4-205ENST00000599720 RSF1Q96T23 1441 aaPredicted RBP32.29■■■□□ 2.76
KCNN4-205ENST00000599720 TOP2AP11388 1531 aaKnown RBP32.03■■■□□ 2.72
KCNN4-205ENST00000599720 LAMC3Q9Y6N6 1575 aa31.91■■■□□ 2.7
KCNN4-205ENST00000599720 NESP48681 1621 aa31.87■■■□□ 2.69
KCNN4-205ENST00000599720 ERCC6Q03468 1493 aa31.84■■■□□ 2.69
KCNN4-205ENST00000599720 CADPSQ9ULU8 1353 aa31.76■■■□□ 2.67
KCNN4-205ENST00000599720 PDS5BQ9NTI5 1447 aa31.68■■■□□ 2.66
KCNN4-205ENST00000599720 CCDC88BA6NC98 1476 aa31.6■■■□□ 2.65
KCNN4-205ENST00000599720 KIF21AQ7Z4S6 1674 aa31.6■■■□□ 2.65
KCNN4-205ENST00000599720 CFTRP13569 1480 aa31.58■■■□□ 2.65
KCNN4-205ENST00000599720 SUPT5HO00267 1087 aaKnown RBP31.5■■■□□ 2.63
KCNN4-205ENST00000599720 CUX2O14529 1486 aa31.5■■■□□ 2.63
KCNN4-205ENST00000599720 PRDM2Q13029 1718 aa31.48■■■□□ 2.63
KCNN4-205ENST00000599720 THOC2Q8NI27 1593 aaKnown RBP31.45■■■□□ 2.63
KCNN4-205ENST00000599720 FANCD2Q9BXW9 1451 aa31.4■■■□□ 2.62
KCNN4-205ENST00000599720 CEP164Q9UPV0 1460 aa31.4■■■□□ 2.62
KCNN4-205ENST00000599720 MRC2Q9UBG0 1479 aa31.33■■■□□ 2.61
KCNN4-205ENST00000599720 WDR62O43379 1518 aa31.23■■■□□ 2.59
KCNN4-205ENST00000599720 URB2Q14146 1524 aaKnown RBP31.05■■■□□ 2.56
KCNN4-205ENST00000599720 ABCC8Q09428 1581 aa30.98■■■□□ 2.55
KCNN4-205ENST00000599720 TOPBP1Q92547 1522 aa30.9■■■□□ 2.54
KCNN4-205ENST00000599720 DNMBPQ6XZF7 1577 aa30.9■■■□□ 2.54
KCNN4-205ENST00000599720 IFT140Q96RY7 1462 aa30.73■■■□□ 2.51
KCNN4-205ENST00000599720 CUX1P39880 1505 aa30.65■■■□□ 2.5
KCNN4-205ENST00000599720 POLA1P09884 1462 aaPredicted RBP30.63■■■□□ 2.49
KCNN4-205ENST00000599720 FGD5Q6ZNL6 1462 aa30.57■■■□□ 2.48
KCNN4-205ENST00000599720 TARBP1Q13395 1621 aaKnown RBP30.56■■■□□ 2.48
KCNN4-205ENST00000599720 SOGA1O94964 1423 aa30.52■■■□□ 2.48
KCNN4-205ENST00000599720 ZNF608Q9ULD9 1512 aaPredicted RBP30.52■■■□□ 2.48
KCNN4-205ENST00000599720 WRNQ14191 1432 aaPredicted RBP eCLIP30.49■■■□□ 2.47
KCNN4-205ENST00000599720 EIF4G3O43432 1585 aaKnown RBP30.47■■■□□ 2.47
KCNN4-205ENST00000599720 RAD54L2Q9Y4B4 1467 aa30.47■■■□□ 2.47
KCNN4-205ENST00000599720 BIVM-ERCC5R4GMW8 1640 aa30.46■■■□□ 2.47
KCNN4-205ENST00000599720 DNAJC5Q9H3Z4 198 aa30.45■■■□□ 2.47
KCNN4-205ENST00000599720 TOP2BQ02880 1626 aa30.44■■■□□ 2.46
KCNN4-205ENST00000599720 WDR97A6NE52 1622 aa30.42■■■□□ 2.46
KCNN4-205ENST00000599720 SYNJ1O43426 1573 aa30.39■■■□□ 2.46
KCNN4-205ENST00000599720 AQRO60306 1485 aaKnown RBP eCLIP30.36■■■□□ 2.457e-7■■■□□ 17.3
KCNN4-205ENST00000599720 TDRD9Q8NDG6 1382 aaKnown RBP30.3■■■□□ 2.44
KCNN4-205ENST00000599720 ABCA10Q8WWZ4 1543 aa30.28■■■□□ 2.44
KCNN4-205ENST00000599720 GAPVD1Q14C86 1478 aa30.19■■■□□ 2.42
KCNN4-205ENST00000599720 OSCARQ8IYS5 282 aa30.18■■■□□ 2.42
KCNN4-205ENST00000599720 GRIN2BQ13224 1484 aa30.18■■■□□ 2.42
KCNN4-205ENST00000599720 PBRM1Q86U86 1689 aa30.17■■■□□ 2.42
KCNN4-205ENST00000599720 ABCA5Q8WWZ7 1642 aa30.17■■■□□ 2.42
KCNN4-205ENST00000599720 CHD1O14646 1710 aa30.12■■■□□ 2.41
KCNN4-205ENST00000599720 MAGI1Q96QZ7 1491 aaPredicted RBP30.12■■■□□ 2.41
KCNN4-205ENST00000599720 SNAPC4Q5SXM2 1469 aa30.11■■■□□ 2.41
KCNN4-205ENST00000599720 FBLN2P98095 1184 aa30.04■■■□□ 2.4
KCNN4-205ENST00000599720 SYNJ2O15056 1496 aa29.99■■■□□ 2.39
KCNN4-205ENST00000599720 CHMP7Q8WUX9 453 aaPredicted RBP29.98■■■□□ 2.39
KCNN4-205ENST00000599720 ERICH3Q5RHP9 1530 aa29.96■■■□□ 2.39
KCNN4-205ENST00000599720 KIF27Q86VH2 1401 aa29.88■■■□□ 2.37
KCNN4-205ENST00000599720 ADAMTS12P58397 1594 aa29.88■■■□□ 2.37
KCNN4-205ENST00000599720 FHAD1B1AJZ9 1412 aa29.83■■■□□ 2.37
KCNN4-205ENST00000599720 TRIM41Q8WV44 630 aa29.8■■■□□ 2.36
KCNN4-205ENST00000599720 GRIN2AQ12879 1464 aa29.78■■■□□ 2.36
KCNN4-205ENST00000599720 CLASP1Q7Z460 1538 aa29.73■■■□□ 2.35
KCNN4-205ENST00000599720 CUL7Q14999 1698 aa29.72■■■□□ 2.35
KCNN4-205ENST00000599720 RIMBP3CA6NJZ7 1639 aa29.69■■■□□ 2.34
KCNN4-205ENST00000599720 RIMBP3BA6NNM3 1639 aa29.69■■■□□ 2.34
KCNN4-205ENST00000599720 RIMBP3Q9UFD9 1639 aa29.69■■■□□ 2.34
KCNN4-205ENST00000599720 IGF1RP08069 1367 aa29.68■■■□□ 2.34
KCNN4-205ENST00000599720 ARHGEF11O15085 1522 aa29.67■■■□□ 2.34
KCNN4-205ENST00000599720 NUP160Q12769 1436 aa29.62■■■□□ 2.33
KCNN4-205ENST00000599720 CEP170Q5SW79 1584 aa29.61■■■□□ 2.33
KCNN4-205ENST00000599720 CARMIL1Q5VZK9 1371 aa29.55■■■□□ 2.32
KCNN4-205ENST00000599720 RUSC2Q8N2Y8 1516 aa29.5■■■□□ 2.31
KCNN4-205ENST00000599720 SHROOM2Q13796 1616 aa29.44■■■□□ 2.3
KCNN4-205ENST00000599720 ARAP1Q96P48 1450 aa29.41■■■□□ 2.3
KCNN4-205ENST00000599720 RAPGEF2Q9Y4G8 1499 aa29.4■■■□□ 2.3
KCNN4-205ENST00000599720 CHIC1Q5VXU3 224 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms