RNA–Protein interactions for RNA: ENST00000369969.6

CLCC1-205, Transcript of chloride channel CLIC like 1, humanhuman

TSL 5 BASIC

Gene CLCC1, Length 4,343 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-205ENST00000369969 NISCHQ9Y2I1 1504 aa12.84□□□□□ -0.35
CLCC1-205ENST00000369969 DCAF8L2P0C7V8 631 aa11.12□□□□□ -0.63
CLCC1-205ENST00000369969 ZCCHC6Q5VYS8 1495 aaKnown RBP10.94□□□□□ -0.66
CLCC1-205ENST00000369969 CCDC180Q9P1Z9 1646 aa10.89□□□□□ -0.67
CLCC1-205ENST00000369969 SHROOM4Q9ULL8 1493 aa10.85□□□□□ -0.67
CLCC1-205ENST00000369969 MYO15BQ96JP2 1530 aa10.78□□□□□ -0.68
CLCC1-205ENST00000369969 CHIC1Q5VXU3 224 aa10.77□□□□□ -0.69
CLCC1-205ENST00000369969 SUPT5HO00267 1087 aaKnown RBP10.7□□□□□ -0.7
CLCC1-205ENST00000369969 HRCP23327 699 aa10.62□□□□□ -0.71
CLCC1-205ENST00000369969 DCAF1Q9Y4B6 1507 aa10.61□□□□□ -0.71
CLCC1-205ENST00000369969 AEBP2Q6ZN18 517 aaPredicted RBP10.39□□□□□ -0.75
CLCC1-205ENST00000369969 ABCC9O60706 1549 aa10.37□□□□□ -0.75
CLCC1-205ENST00000369969 PCGF6Q9BYE7 350 aa10.37□□□□□ -0.75
CLCC1-205ENST00000369969 PPARGC1BQ86YN6 1023 aaKnown RBP10.33□□□□□ -0.76
CLCC1-205ENST00000369969 LOC105371045A0A1W2PR82 267 aa10.27□□□□□ -0.77
CLCC1-205ENST00000369969 RSF1Q96T23 1441 aaPredicted RBP10.21□□□□□ -0.77
CLCC1-205ENST00000369969 TRIM26Q12899 539 aaPredicted RBP10.19□□□□□ -0.78
CLCC1-205ENST00000369969 RB1CC1Q8TDY2 1594 aa10.16□□□□□ -0.78
CLCC1-205ENST00000369969 SCRIBQ14160 1630 aa10.11□□□□□ -0.79
CLCC1-205ENST00000369969 EIF4G1Q04637 1599 aaKnown RBP10.07□□□□□ -0.8
CLCC1-205ENST00000369969 EHMT2Q96KQ7 1210 aa10.04□□□□□ -0.8
CLCC1-205ENST00000369969 FAM9AQ8IZU1 332 aaPredicted RBP10□□□□□ -0.81
CLCC1-205ENST00000369969 TRIM41Q8WV44 630 aa9.99□□□□□ -0.81
CLCC1-205ENST00000369969 ZEB1P37275 1124 aaPredicted RBP9.99□□□□□ -0.81
CLCC1-205ENST00000369969 MROH2BQ7Z745 1585 aa9.98□□□□□ -0.81
CLCC1-205ENST00000369969 CECR2Q9BXF3 1484 aa9.98□□□□□ -0.81
CLCC1-205ENST00000369969 WIZO95785 1651 aa9.95□□□□□ -0.82
CLCC1-205ENST00000369969 NACADO15069 1562 aa9.94□□□□□ -0.82
CLCC1-205ENST00000369969 BAZ1AQ9NRL2 1556 aaPredicted RBP9.93□□□□□ -0.82
CLCC1-205ENST00000369969 SCAF1Q9H7N4 1312 aaKnown RBP9.92□□□□□ -0.82
CLCC1-205ENST00000369969 APLP2Q06481 763 aa9.92□□□□□ -0.82
CLCC1-205ENST00000369969 WRNQ14191 1432 aaPredicted RBP eCLIP9.84□□□□□ -0.83
CLCC1-205ENST00000369969 PELP1Q8IZL8 1130 aaKnown RBP9.82□□□□□ -0.84
CLCC1-205ENST00000369969 TOP2AP11388 1531 aaKnown RBP9.79□□□□□ -0.84
CLCC1-205ENST00000369969 SMARCA2P51531 1590 aa9.77□□□□□ -0.85
CLCC1-205ENST00000369969 CCDC88BA6NC98 1476 aa9.76□□□□□ -0.85
CLCC1-205ENST00000369969 ABCC8Q09428 1581 aa9.75□□□□□ -0.85
CLCC1-205ENST00000369969 SMARCA4P51532 1647 aa9.75□□□□□ -0.85
CLCC1-205ENST00000369969 UBTFP17480 764 aaKnown RBP9.74□□□□□ -0.85
CLCC1-205ENST00000369969 UNC13AQ9UPW8 1703 aa9.74□□□□□ -0.85
CLCC1-205ENST00000369969 ACIN1Q9UKV3 1341 aaKnown RBP9.7□□□□□ -0.86
CLCC1-205ENST00000369969 TTBK1Q5TCY1 1321 aaPredicted RBP9.7□□□□□ -0.86
CLCC1-205ENST00000369969 CEP162Q5TB80 1403 aa9.7□□□□□ -0.86
CLCC1-205ENST00000369969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.7□□□□□ -0.86
CLCC1-205ENST00000369969 NEUROD1Q13562 356 aa9.7□□□□□ -0.86
CLCC1-205ENST00000369969 TNIKQ9UKE5 1360 aa9.69□□□□□ -0.86
CLCC1-205ENST00000369969 SOGA1O94964 1423 aa9.68□□□□□ -0.86
CLCC1-205ENST00000369969 RUSC2Q8N2Y8 1516 aa9.66□□□□□ -0.86
CLCC1-205ENST00000369969 RANGAP1P46060 587 aaPredicted RBP9.65□□□□□ -0.86
CLCC1-205ENST00000369969 CCER1Q8TC90 406 aaPredicted RBP9.65□□□□□ -0.86
CLCC1-205ENST00000369969 PEG3Q9GZU2 1588 aa9.64□□□□□ -0.87
CLCC1-205ENST00000369969 EEA1Q15075 1411 aa9.64□□□□□ -0.87
CLCC1-205ENST00000369969 KIF21BO75037 1637 aa9.6□□□□□ -0.87
CLCC1-205ENST00000369969 DIEXFQ68CQ4 756 aaKnown RBP9.6□□□□□ -0.87
CLCC1-205ENST00000369969 BICRAQ9NZM4 1560 aa9.57□□□□□ -0.88
CLCC1-205ENST00000369969 SYNJ1O43426 1573 aa9.57□□□□□ -0.88
CLCC1-205ENST00000369969 GOLGA3Q08378 1498 aa9.57□□□□□ -0.88
CLCC1-205ENST00000369969 GTF3C3Q9Y5Q9 886 aa9.55□□□□□ -0.88
CLCC1-205ENST00000369969 PABPN1Q86U42 306 aaKnown RBP eCLIP9.54□□□□□ -0.88
CLCC1-205ENST00000369969 CSRNP3Q8WYN3 585 aa9.54□□□□□ -0.88
CLCC1-205ENST00000369969 ATP1B4Q9UN42 357 aaPredicted RBP9.53□□□□□ -0.88
CLCC1-205ENST00000369969 PHF23Q9BUL5 403 aaPredicted RBP9.53□□□□□ -0.88
CLCC1-205ENST00000369969 ZNF316A6NFI3 1004 aaPredicted RBP9.5□□□□□ -0.89
CLCC1-205ENST00000369969 CEP164Q9UPV0 1460 aa9.5□□□□□ -0.89
CLCC1-205ENST00000369969 BAZ1BQ9UIG0 1483 aaKnown RBP9.5□□□□□ -0.89
CLCC1-205ENST00000369969 CENPBP07199 599 aaPredicted RBP9.48□□□□□ -0.89
CLCC1-205ENST00000369969 CLIP1P30622 1438 aa9.48□□□□□ -0.89
CLCC1-205ENST00000369969 VPS8Q8N3P4 1428 aa9.48□□□□□ -0.89
CLCC1-205ENST00000369969 RAPGEF2Q9Y4G8 1499 aa9.44□□□□□ -0.9
CLCC1-205ENST00000369969 BIVM-ERCC5R4GMW8 1640 aa9.44□□□□□ -0.9
CLCC1-205ENST00000369969 TOP2BQ02880 1626 aa9.44□□□□□ -0.9
CLCC1-205ENST00000369969 MIER1Q8N108 512 aa9.42□□□□□ -0.9
CLCC1-205ENST00000369969 ATAD2BQ9ULI0 1458 aa9.41□□□□□ -0.9
CLCC1-205ENST00000369969 ERICH3Q5RHP9 1530 aa9.4□□□□□ -0.9
CLCC1-205ENST00000369969 CUX2O14529 1486 aa9.4□□□□□ -0.91
CLCC1-205ENST00000369969 PRXQ9BXM0 1461 aa9.39□□□□□ -0.91
CLCC1-205ENST00000369969 ARAP1Q96P48 1450 aa9.39□□□□□ -0.91
CLCC1-205ENST00000369969 DHX57Q6P158 1386 aaKnown RBP9.37□□□□□ -0.91
CLCC1-205ENST00000369969 CLSPNQ9HAW4 1339 aa9.36□□□□□ -0.91
CLCC1-205ENST00000369969 HNRNPUL2Q1KMD3 747 aaKnown RBP9.35□□□□□ -0.91
CLCC1-205ENST00000369969 RRBP1Q9P2E9 1410 aaKnown RBP9.35□□□□□ -0.91
CLCC1-205ENST00000369969 MYT1Q01538 1121 aa9.34□□□□□ -0.91
CLCC1-205ENST00000369969 ITGAEP38570 1179 aa9.3□□□□□ -0.92
CLCC1-205ENST00000369969 CUX1P39880 1505 aa9.29□□□□□ -0.92
CLCC1-205ENST00000369969 MAPKBP1O60336 1514 aa9.27□□□□□ -0.93
CLCC1-205ENST00000369969 YTHDC1Q96MU7 727 aaKnown RBP9.27□□□□□ -0.93
CLCC1-205ENST00000369969 KANK4Q5T7N3 995 aaPredicted RBP9.26□□□□□ -0.93
CLCC1-205ENST00000369969 HMGXB3Q12766 1538 aa9.25□□□□□ -0.93
CLCC1-205ENST00000369969 ARHGAP35Q9NRY4 1499 aa9.25□□□□□ -0.93
CLCC1-205ENST00000369969 MAP3K1Q13233 1512 aa9.24□□□□□ -0.93
CLCC1-205ENST00000369969 PRDM2Q13029 1718 aa9.23□□□□□ -0.93
CLCC1-205ENST00000369969 SUPT16HQ9Y5B9 1047 aaKnown RBP9.22□□□□□ -0.93
CLCC1-205ENST00000369969 NCAPD3P42695 1498 aa9.21□□□□□ -0.94
CLCC1-205ENST00000369969 CFTRP13569 1480 aa9.19□□□□□ -0.94
CLCC1-205ENST00000369969 TIAM1Q13009 1591 aa9.19□□□□□ -0.94
CLCC1-205ENST00000369969 PLPPR3Q6T4P5 718 aa9.19□□□□□ -0.94
CLCC1-205ENST00000369969 CCNB3Q8WWL7 1395 aa9.18□□□□□ -0.94
CLCC1-205ENST00000369969 NEFLP07196 543 aa9.17□□□□□ -0.94
CLCC1-205ENST00000369969 CFAP43Q8NDM7 1665 aa9.17□□□□□ -0.94
CLCC1-205ENST00000369969 FAM50AQ14320 339 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms