RNA–Protein interactions for RNA: ENST00000586150.5

NPC1-203, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-203ENST00000586150 NISCHQ9Y2I1 1504 aa33.55■■■□□ 2.96
NPC1-203ENST00000586150 ABCC9O60706 1549 aa30.56■■■□□ 2.48
NPC1-203ENST00000586150 CCDC180Q9P1Z9 1646 aa30.2■■■□□ 2.43
NPC1-203ENST00000586150 DNAJC5BQ9UF47 199 aa29.02■■■□□ 2.24
NPC1-203ENST00000586150 RB1CC1Q8TDY2 1594 aa28.86■■■□□ 2.21
NPC1-203ENST00000586150 NACADO15069 1562 aa28.58■■■□□ 2.17
NPC1-203ENST00000586150 UNC13AQ9UPW8 1703 aa28.43■■■□□ 2.14
NPC1-203ENST00000586150 DCAF8L2P0C7V8 631 aa28.42■■■□□ 2.14
NPC1-203ENST00000586150 PABPN1Q86U42 306 aaKnown RBP eCLIP28.42■■■□□ 2.14
NPC1-203ENST00000586150 BICRAQ9NZM4 1560 aa28.18■■■□□ 2.1
NPC1-203ENST00000586150 MYO15BQ96JP2 1530 aa28.06■■■□□ 2.08
NPC1-203ENST00000586150 ZCCHC6Q5VYS8 1495 aaKnown RBP27.75■■■□□ 2.03
NPC1-203ENST00000586150 DCAF1Q9Y4B6 1507 aa27.62■■■□□ 2.01
NPC1-203ENST00000586150 CC2D2AQ9P2K1 1620 aa27.59■■■□□ 2.01
NPC1-203ENST00000586150 SCRIBQ14160 1630 aa27.59■■■□□ 2.01
NPC1-203ENST00000586150 SHROOM4Q9ULL8 1493 aa27.52■■■□□ 2
NPC1-203ENST00000586150 CECR2Q9BXF3 1484 aa27.51■■□□□ 1.99
NPC1-203ENST00000586150 EIF4G1Q04637 1599 aaKnown RBP27.43■■□□□ 1.98
NPC1-203ENST00000586150 DNAJC5Q9H3Z4 198 aa26.7■■□□□ 1.86
NPC1-203ENST00000586150 NCAPD3P42695 1498 aa26.42■■□□□ 1.82
NPC1-203ENST00000586150 CUX2O14529 1486 aa26.34■■□□□ 1.81
NPC1-203ENST00000586150 ATAD2BQ9ULI0 1458 aa26.34■■□□□ 1.81
NPC1-203ENST00000586150 ERCC6Q03468 1493 aa26.3■■□□□ 1.8
NPC1-203ENST00000586150 SMARCA4P51532 1647 aa26.26■■□□□ 1.79
NPC1-203ENST00000586150 NESP48681 1621 aa26.22■■□□□ 1.79
NPC1-203ENST00000586150 HMGXB3Q12766 1538 aa26.19■■□□□ 1.78
NPC1-203ENST00000586150 SMARCA2P51531 1590 aa26.17■■□□□ 1.78
NPC1-203ENST00000586150 BAZ1BQ9UIG0 1483 aaKnown RBP26.02■■□□□ 1.76
NPC1-203ENST00000586150 BAZ1AQ9NRL2 1556 aaPredicted RBP26.01■■□□□ 1.75
NPC1-203ENST00000586150 THOC2Q8NI27 1593 aaKnown RBP25.98■■□□□ 1.75
NPC1-203ENST00000586150 PEG3Q9GZU2 1588 aa25.97■■□□□ 1.75
NPC1-203ENST00000586150 MROH2BQ7Z745 1585 aa25.91■■□□□ 1.74
NPC1-203ENST00000586150 KIF21AQ7Z4S6 1674 aa25.88■■□□□ 1.73
NPC1-203ENST00000586150 LAMC3Q9Y6N6 1575 aa25.86■■□□□ 1.73
NPC1-203ENST00000586150 PDS5BQ9NTI5 1447 aa25.66■■□□□ 1.7
NPC1-203ENST00000586150 WIZO95785 1651 aa25.63■■□□□ 1.69
NPC1-203ENST00000586150 CADPSQ9ULU8 1353 aa25.59■■□□□ 1.69
NPC1-203ENST00000586150 MRC2Q9UBG0 1479 aa25.52■■□□□ 1.68
NPC1-203ENST00000586150 WDR62O43379 1518 aa25.5■■□□□ 1.67
NPC1-203ENST00000586150 TRIM41Q8WV44 630 aa25.44■■□□□ 1.66
NPC1-203ENST00000586150 CEP164Q9UPV0 1460 aa25.35■■□□□ 1.65
NPC1-203ENST00000586150 FANCD2Q9BXW9 1451 aa25.34■■□□□ 1.65
NPC1-203ENST00000586150 CFTRP13569 1480 aa25.26■■□□□ 1.63
NPC1-203ENST00000586150 RSF1Q96T23 1441 aaPredicted RBP25.22■■□□□ 1.63
NPC1-203ENST00000586150 URB2Q14146 1524 aaKnown RBP25.21■■□□□ 1.63
NPC1-203ENST00000586150 TOP2AP11388 1531 aaKnown RBP25.17■■□□□ 1.62
NPC1-203ENST00000586150 OSCARQ8IYS5 282 aa25.08■■□□□ 1.61
NPC1-203ENST00000586150 PRDM2Q13029 1718 aa25.06■■□□□ 1.6
NPC1-203ENST00000586150 ZNF608Q9ULD9 1512 aaPredicted RBP24.96■■□□□ 1.59
NPC1-203ENST00000586150 CCDC88BA6NC98 1476 aa24.93■■□□□ 1.58
NPC1-203ENST00000586150 RIMBP3CA6NJZ7 1639 aa24.92■■□□□ 1.58
NPC1-203ENST00000586150 RIMBP3BA6NNM3 1639 aa24.92■■□□□ 1.58
NPC1-203ENST00000586150 RIMBP3Q9UFD9 1639 aa24.92■■□□□ 1.58
NPC1-203ENST00000586150 TOPBP1Q92547 1522 aa24.85■■□□□ 1.57
NPC1-203ENST00000586150 IFT140Q96RY7 1462 aa24.83■■□□□ 1.57
NPC1-203ENST00000586150 ARHGEF11O15085 1522 aa24.77■■□□□ 1.56
NPC1-203ENST00000586150 EIF4G3O43432 1585 aaKnown RBP24.77■■□□□ 1.56
NPC1-203ENST00000586150 CHD1O14646 1710 aa24.7■■□□□ 1.54
NPC1-203ENST00000586150 DNMBPQ6XZF7 1577 aa24.7■■□□□ 1.54
NPC1-203ENST00000586150 TARBP1Q13395 1621 aaKnown RBP24.68■■□□□ 1.54
NPC1-203ENST00000586150 AQRO60306 1485 aaKnown RBP eCLIP24.66■■□□□ 1.54
NPC1-203ENST00000586150 ABCC8Q09428 1581 aa24.63■■□□□ 1.53
NPC1-203ENST00000586150 CYB5RLQ6IPT4 315 aa24.58■■□□□ 1.53
NPC1-203ENST00000586150 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.52
NPC1-203ENST00000586150 RAD54L2Q9Y4B4 1467 aa24.54■■□□□ 1.52
NPC1-203ENST00000586150 ARAP1Q96P48 1450 aa24.53■■□□□ 1.52
NPC1-203ENST00000586150 FBLN2P98095 1184 aa24.49■■□□□ 1.51
NPC1-203ENST00000586150 TDRD9Q8NDG6 1382 aaKnown RBP24.45■■□□□ 1.5
NPC1-203ENST00000586150 SOGA1O94964 1423 aa24.42■■□□□ 1.5
NPC1-203ENST00000586150 SNAPC4Q5SXM2 1469 aa24.38■■□□□ 1.49
NPC1-203ENST00000586150 FGD5Q6ZNL6 1462 aa24.38■■□□□ 1.49
NPC1-203ENST00000586150 TRHP20396 242 aaPredicted RBP24.36■■□□□ 1.49
NPC1-203ENST00000586150 CUX1P39880 1505 aa24.35■■□□□ 1.49
NPC1-203ENST00000586150 CLASP1Q7Z460 1538 aa24.35■■□□□ 1.49
NPC1-203ENST00000586150 WDR97A6NE52 1622 aa24.28■■□□□ 1.48
NPC1-203ENST00000586150 MAGI1Q96QZ7 1491 aaPredicted RBP24.23■■□□□ 1.47
NPC1-203ENST00000586150 SYNJ1O43426 1573 aa24.23■■□□□ 1.47
NPC1-203ENST00000586150 CHMP7Q8WUX9 453 aaPredicted RBP24.22■■□□□ 1.47
NPC1-203ENST00000586150 GRIN2BQ13224 1484 aa24.21■■□□□ 1.47
NPC1-203ENST00000586150 PBRM1Q86U86 1689 aa24.21■■□□□ 1.47
NPC1-203ENST00000586150 SYNJ2O15056 1496 aa24.18■■□□□ 1.46
NPC1-203ENST00000586150 GAPVD1Q14C86 1478 aa24.12■■□□□ 1.45
NPC1-203ENST00000586150 ABCA5Q8WWZ7 1642 aa24.1■■□□□ 1.45
NPC1-203ENST00000586150 ABCA10Q8WWZ4 1543 aa24.05■■□□□ 1.44
NPC1-203ENST00000586150 ERCC6L2Q5T890 1561 aa24.05■■□□□ 1.44
NPC1-203ENST00000586150 CEP170Q5SW79 1584 aa23.94■■□□□ 1.42
NPC1-203ENST00000586150 GRIN2AQ12879 1464 aa23.94■■□□□ 1.42
NPC1-203ENST00000586150 ADAMTS12P58397 1594 aa23.92■■□□□ 1.42
NPC1-203ENST00000586150 SUPT5HO00267 1087 aaKnown RBP23.89■■□□□ 1.41
NPC1-203ENST00000586150 NUP160Q12769 1436 aa23.87■■□□□ 1.41
NPC1-203ENST00000586150 BIVM-ERCC5R4GMW8 1640 aa23.86■■□□□ 1.41
NPC1-203ENST00000586150 WRNQ14191 1432 aaPredicted RBP eCLIP23.84■■□□□ 1.41
NPC1-203ENST00000586150 TOP2BQ02880 1626 aa23.84■■□□□ 1.41
NPC1-203ENST00000586150 SHROOM2Q13796 1616 aa23.84■■□□□ 1.41
NPC1-203ENST00000586150 AEBP2Q6ZN18 517 aaPredicted RBP23.79■■□□□ 1.4
NPC1-203ENST00000586150 FHAD1B1AJZ9 1412 aa23.76■■□□□ 1.39
NPC1-203ENST00000586150 KIF13AQ9H1H9 1805 aa23.76■■□□□ 1.39
NPC1-203ENST00000586150 ERICH3Q5RHP9 1530 aa23.72■■□□□ 1.39
NPC1-203ENST00000586150 PRG4Q92954 1404 aaPredicted RBP23.66■■□□□ 1.38
NPC1-203ENST00000586150 JPH4Q96JJ6 628 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms