RNA–Protein interactions for RNA: ENST00000624957.3

GPS1-228, Transcript of G protein pathway suppressor 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene GPS1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPS1-228ENST00000624957 NISCHQ9Y2I1 1504 aa38.32■■■■□ 3.73
GPS1-228ENST00000624957 CCDC180Q9P1Z9 1646 aa33.47■■■□□ 2.95
GPS1-228ENST00000624957 ZCCHC6Q5VYS8 1495 aaKnown RBP32.18■■■□□ 2.74
GPS1-228ENST00000624957 DCAF1Q9Y4B6 1507 aa31.73■■■□□ 2.67
GPS1-228ENST00000624957 ABCC9O60706 1549 aa31.65■■■□□ 2.66
GPS1-228ENST00000624957 DCAF8L2P0C7V8 631 aa31.62■■■□□ 2.65
GPS1-228ENST00000624957 MYO15BQ96JP2 1530 aa31.4■■■□□ 2.62
GPS1-228ENST00000624957 NACADO15069 1562 aa31.2■■■□□ 2.58
GPS1-228ENST00000624957 SHROOM4Q9ULL8 1493 aa31.13■■■□□ 2.57
GPS1-228ENST00000624957 RB1CC1Q8TDY2 1594 aa30.93■■■□□ 2.54
GPS1-228ENST00000624957 SCRIBQ14160 1630 aa30.71■■■□□ 2.51
GPS1-228ENST00000624957 UNC13AQ9UPW8 1703 aa30.25■■■□□ 2.43
GPS1-228ENST00000624957 BICRAQ9NZM4 1560 aa29.96■■■□□ 2.39
GPS1-228ENST00000624957 SUPT5HO00267 1087 aaKnown RBP29.95■■■□□ 2.39
GPS1-228ENST00000624957 PABPN1Q86U42 306 aaKnown RBP eCLIP29.82■■■□□ 2.362e-7■■■□□ 16.2
GPS1-228ENST00000624957 CECR2Q9BXF3 1484 aa29.74■■■□□ 2.35
GPS1-228ENST00000624957 RSF1Q96T23 1441 aaPredicted RBP29.69■■■□□ 2.34
GPS1-228ENST00000624957 BAZ1AQ9NRL2 1556 aaPredicted RBP29.61■■■□□ 2.33
GPS1-228ENST00000624957 MROH2BQ7Z745 1585 aa29.57■■■□□ 2.32
GPS1-228ENST00000624957 SMARCA4P51532 1647 aa29.46■■■□□ 2.31
GPS1-228ENST00000624957 WIZO95785 1651 aa29.31■■■□□ 2.28
GPS1-228ENST00000624957 PEG3Q9GZU2 1588 aa29.14■■■□□ 2.25
GPS1-228ENST00000624957 EIF4G1Q04637 1599 aaKnown RBP29.08■■■□□ 2.25
GPS1-228ENST00000624957 TOP2AP11388 1531 aaKnown RBP29.06■■■□□ 2.24
GPS1-228ENST00000624957 SMARCA2P51531 1590 aa29.02■■■□□ 2.24
GPS1-228ENST00000624957 ATAD2BQ9ULI0 1458 aa29.01■■■□□ 2.23
GPS1-228ENST00000624957 BAZ1BQ9UIG0 1483 aaKnown RBP28.84■■■□□ 2.21
GPS1-228ENST00000624957 NCAPD3P42695 1498 aa28.79■■■□□ 2.2
GPS1-228ENST00000624957 HMGXB3Q12766 1538 aa28.74■■■□□ 2.19
GPS1-228ENST00000624957 CCDC88BA6NC98 1476 aa28.74■■■□□ 2.19
GPS1-228ENST00000624957 CHIC1Q5VXU3 224 aa28.66■■■□□ 2.18
GPS1-228ENST00000624957 CC2D2AQ9P2K1 1620 aa28.65■■■□□ 2.18
GPS1-228ENST00000624957 TRIM41Q8WV44 630 aa28.21■■■□□ 2.11
GPS1-228ENST00000624957 CFTRP13569 1480 aa28.12■■■□□ 2.09
GPS1-228ENST00000624957 ABCC8Q09428 1581 aa28.07■■■□□ 2.08
GPS1-228ENST00000624957 CADPSQ9ULU8 1353 aa28.04■■■□□ 2.08
GPS1-228ENST00000624957 WRNQ14191 1432 aaPredicted RBP eCLIP27.97■■■□□ 2.07
GPS1-228ENST00000624957 PRDM2Q13029 1718 aa27.96■■■□□ 2.07
GPS1-228ENST00000624957 DNAJC5BQ9UF47 199 aa27.94■■■□□ 2.06
GPS1-228ENST00000624957 SYNJ1O43426 1573 aa27.81■■■□□ 2.04
GPS1-228ENST00000624957 LAMC3Q9Y6N6 1575 aa27.81■■■□□ 2.04
GPS1-228ENST00000624957 NESP48681 1621 aa27.75■■■□□ 2.03
GPS1-228ENST00000624957 TOP2BQ02880 1626 aa27.74■■■□□ 2.03
GPS1-228ENST00000624957 FANCD2Q9BXW9 1451 aa27.71■■■□□ 2.03
GPS1-228ENST00000624957 BIVM-ERCC5R4GMW8 1640 aa27.71■■■□□ 2.03
GPS1-228ENST00000624957 CUX1P39880 1505 aa27.66■■■□□ 2.02
GPS1-228ENST00000624957 FAM9AQ8IZU1 332 aaPredicted RBP27.63■■■□□ 2.01
GPS1-228ENST00000624957 PDS5BQ9NTI5 1447 aa27.62■■■□□ 2.01
GPS1-228ENST00000624957 LOC105371045A0A1W2PR82 267 aa27.57■■■□□ 2
GPS1-228ENST00000624957 EEA1Q15075 1411 aa27.57■■■□□ 2
GPS1-228ENST00000624957 CEP164Q9UPV0 1460 aa27.56■■■□□ 2
GPS1-228ENST00000624957 SOGA1O94964 1423 aa27.55■■■□□ 2
GPS1-228ENST00000624957 DNMBPQ6XZF7 1577 aa27.46■■□□□ 1.99
GPS1-228ENST00000624957 KIF21AQ7Z4S6 1674 aa27.43■■□□□ 1.98
GPS1-228ENST00000624957 RUSC2Q8N2Y8 1516 aa27.43■■□□□ 1.98
GPS1-228ENST00000624957 TOPBP1Q92547 1522 aa27.41■■□□□ 1.98
GPS1-228ENST00000624957 CSRNP3Q8WYN3 585 aa27.39■■□□□ 1.98
GPS1-228ENST00000624957 FGD5Q6ZNL6 1462 aa27.38■■□□□ 1.97
GPS1-228ENST00000624957 URB2Q14146 1524 aaKnown RBP27.35■■□□□ 1.97
GPS1-228ENST00000624957 KIF27Q86VH2 1401 aa27.29■■□□□ 1.96
GPS1-228ENST00000624957 POLA1P09884 1462 aaPredicted RBP27.27■■□□□ 1.96
GPS1-228ENST00000624957 MRC2Q9UBG0 1479 aa27.25■■□□□ 1.95
GPS1-228ENST00000624957 EHMT2Q96KQ7 1210 aa27.21■■□□□ 1.95
GPS1-228ENST00000624957 CUX2O14529 1486 aa27.19■■□□□ 1.94
GPS1-228ENST00000624957 ERCC6Q03468 1493 aa27.18■■□□□ 1.94
GPS1-228ENST00000624957 KIF21BO75037 1637 aa27.18■■□□□ 1.94
GPS1-228ENST00000624957 ABCA10Q8WWZ4 1543 aa27.16■■□□□ 1.94
GPS1-228ENST00000624957 GOLGA3Q08378 1498 aa27.16■■□□□ 1.94
GPS1-228ENST00000624957 RAD54L2Q9Y4B4 1467 aa27.15■■□□□ 1.94
GPS1-228ENST00000624957 WDR62O43379 1518 aa27.11■■□□□ 1.93
GPS1-228ENST00000624957 PRXQ9BXM0 1461 aa27.07■■□□□ 1.92
GPS1-228ENST00000624957 TNIKQ9UKE5 1360 aa27.06■■□□□ 1.92
GPS1-228ENST00000624957 WDR97A6NE52 1622 aa27.05■■□□□ 1.92
GPS1-228ENST00000624957 IGF1RP08069 1367 aa27.03■■□□□ 1.92
GPS1-228ENST00000624957 ERICH3Q5RHP9 1530 aa27.03■■□□□ 1.92
GPS1-228ENST00000624957 UBTFP17480 764 aaKnown RBP27.02■■□□□ 1.92
GPS1-228ENST00000624957 RAPGEF2Q9Y4G8 1499 aa27.01■■□□□ 1.91
GPS1-228ENST00000624957 THOC2Q8NI27 1593 aaKnown RBP27.01■■□□□ 1.91
GPS1-228ENST00000624957 TARBP1Q13395 1621 aaKnown RBP27■■□□□ 1.91
GPS1-228ENST00000624957 ABCA5Q8WWZ7 1642 aa26.93■■□□□ 1.9
GPS1-228ENST00000624957 IFT140Q96RY7 1462 aa26.92■■□□□ 1.9
GPS1-228ENST00000624957 TDRD9Q8NDG6 1382 aaKnown RBP26.9■■□□□ 1.9
GPS1-228ENST00000624957 CARMIL1Q5VZK9 1371 aa26.9■■□□□ 1.9
GPS1-228ENST00000624957 GAPVD1Q14C86 1478 aa26.89■■□□□ 1.89
GPS1-228ENST00000624957 CEP162Q5TB80 1403 aa26.89■■□□□ 1.89
GPS1-228ENST00000624957 CUL7Q14999 1698 aa26.84■■□□□ 1.89
GPS1-228ENST00000624957 AQRO60306 1485 aaKnown RBP eCLIP26.74■■□□□ 1.873e-8■□□□□ 10.6
GPS1-228ENST00000624957 ZNF608Q9ULD9 1512 aaPredicted RBP26.72■■□□□ 1.87
GPS1-228ENST00000624957 PBRM1Q86U86 1689 aa26.71■■□□□ 1.87
GPS1-228ENST00000624957 CLIP1P30622 1438 aa26.71■■□□□ 1.87
GPS1-228ENST00000624957 GRIN2BQ13224 1484 aa26.7■■□□□ 1.86
GPS1-228ENST00000624957 EIF4G3O43432 1585 aaKnown RBP26.64■■□□□ 1.85
GPS1-228ENST00000624957 FHAD1B1AJZ9 1412 aa26.61■■□□□ 1.85
GPS1-228ENST00000624957 ADAMTS12P58397 1594 aa26.59■■□□□ 1.85
GPS1-228ENST00000624957 RANGAP1P46060 587 aaPredicted RBP26.53■■□□□ 1.84
GPS1-228ENST00000624957 CTTNBP2Q8WZ74 1663 aa26.5■■□□□ 1.83
GPS1-228ENST00000624957 SNAPC4Q5SXM2 1469 aa26.5■■□□□ 1.83
GPS1-228ENST00000624957 MAGI1Q96QZ7 1491 aaPredicted RBP26.49■■□□□ 1.83
GPS1-228ENST00000624957 VPS8Q8N3P4 1428 aa26.47■■□□□ 1.83
GPS1-228ENST00000624957 ARHGAP35Q9NRY4 1499 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms