RNA–Protein interactions for RNA: ENST00000487660.1

TKT-213, Transcript of transketolase, humanhuman

TSL 2

Gene TKT, Length 610 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TKT-213ENST00000487660 NISCHQ9Y2I1 1504 aa40.83■■■■■ 4.13
TKT-213ENST00000487660 CCDC180Q9P1Z9 1646 aa36.31■■■■□ 3.4
TKT-213ENST00000487660 ABCC9O60706 1549 aa35.66■■■■□ 3.3
TKT-213ENST00000487660 RB1CC1Q8TDY2 1594 aa34.19■■■■□ 3.06
TKT-213ENST00000487660 DCAF8L2P0C7V8 631 aa34.12■■■■□ 3.05
TKT-213ENST00000487660 NACADO15069 1562 aa34.11■■■■□ 3.05
TKT-213ENST00000487660 ZCCHC6Q5VYS8 1495 aaKnown RBP34.01■■■■□ 3.03
TKT-213ENST00000487660 MYO15BQ96JP2 1530 aa33.85■■■■□ 3.01
TKT-213ENST00000487660 DCAF1Q9Y4B6 1507 aa33.71■■■□□ 2.99
TKT-213ENST00000487660 UNC13AQ9UPW8 1703 aa33.61■■■□□ 2.97
TKT-213ENST00000487660 PABPN1Q86U42 306 aaKnown RBP eCLIP33.32■■■□□ 2.92
TKT-213ENST00000487660 BICRAQ9NZM4 1560 aa33.28■■■□□ 2.92
TKT-213ENST00000487660 SCRIBQ14160 1630 aa33.21■■■□□ 2.91
TKT-213ENST00000487660 DNAJC5BQ9UF47 199 aa32.86■■■□□ 2.85
TKT-213ENST00000487660 SHROOM4Q9ULL8 1493 aa32.7■■■□□ 2.83
TKT-213ENST00000487660 EIF4G1Q04637 1599 aaKnown RBP32.35■■■□□ 2.77
TKT-213ENST00000487660 CC2D2AQ9P2K1 1620 aa32.26■■■□□ 2.75
TKT-213ENST00000487660 CECR2Q9BXF3 1484 aa31.99■■■□□ 2.71
TKT-213ENST00000487660 SMARCA4P51532 1647 aa31.73■■■□□ 2.67
TKT-213ENST00000487660 BAZ1AQ9NRL2 1556 aaPredicted RBP31.6■■■□□ 2.65
TKT-213ENST00000487660 ATAD2BQ9ULI0 1458 aa31.54■■■□□ 2.64
TKT-213ENST00000487660 MROH2BQ7Z745 1585 aa31.53■■■□□ 2.64
TKT-213ENST00000487660 NCAPD3P42695 1498 aa31.49■■■□□ 2.63
TKT-213ENST00000487660 SMARCA2P51531 1590 aa31.44■■■□□ 2.62
TKT-213ENST00000487660 PEG3Q9GZU2 1588 aa31.37■■■□□ 2.61
TKT-213ENST00000487660 HMGXB3Q12766 1538 aa31.34■■■□□ 2.61
TKT-213ENST00000487660 BAZ1BQ9UIG0 1483 aaKnown RBP31.25■■■□□ 2.59
TKT-213ENST00000487660 WIZO95785 1651 aa31.22■■■□□ 2.59
TKT-213ENST00000487660 RSF1Q96T23 1441 aaPredicted RBP31.1■■■□□ 2.57
TKT-213ENST00000487660 NESP48681 1621 aa30.89■■■□□ 2.54
TKT-213ENST00000487660 TOP2AP11388 1531 aaKnown RBP30.79■■■□□ 2.52
TKT-213ENST00000487660 LAMC3Q9Y6N6 1575 aa30.68■■■□□ 2.5
TKT-213ENST00000487660 ERCC6Q03468 1493 aa30.65■■■□□ 2.5
TKT-213ENST00000487660 CADPSQ9ULU8 1353 aa30.56■■■□□ 2.48
TKT-213ENST00000487660 KIF21AQ7Z4S6 1674 aa30.53■■■□□ 2.48
TKT-213ENST00000487660 CCDC88BA6NC98 1476 aa30.45■■■□□ 2.47
TKT-213ENST00000487660 PDS5BQ9NTI5 1447 aa30.41■■■□□ 2.46
TKT-213ENST00000487660 THOC2Q8NI27 1593 aaKnown RBP30.41■■■□□ 2.46
TKT-213ENST00000487660 CFTRP13569 1480 aa30.39■■■□□ 2.46
TKT-213ENST00000487660 CUX2O14529 1486 aa30.33■■■□□ 2.45
TKT-213ENST00000487660 SUPT5HO00267 1087 aaKnown RBP30.26■■■□□ 2.43
TKT-213ENST00000487660 FANCD2Q9BXW9 1451 aa30.25■■■□□ 2.43
TKT-213ENST00000487660 PRDM2Q13029 1718 aa30.23■■■□□ 2.43
TKT-213ENST00000487660 CEP164Q9UPV0 1460 aa30.19■■■□□ 2.42
TKT-213ENST00000487660 MRC2Q9UBG0 1479 aa30.18■■■□□ 2.42
TKT-213ENST00000487660 WDR62O43379 1518 aa30.11■■■□□ 2.41
TKT-213ENST00000487660 URB2Q14146 1524 aaKnown RBP30.01■■■□□ 2.39
TKT-213ENST00000487660 TOPBP1Q92547 1522 aa29.78■■■□□ 2.36
TKT-213ENST00000487660 DNMBPQ6XZF7 1577 aa29.73■■■□□ 2.35
TKT-213ENST00000487660 ABCC8Q09428 1581 aa29.64■■■□□ 2.34
TKT-213ENST00000487660 CUX1P39880 1505 aa29.57■■■□□ 2.32
TKT-213ENST00000487660 IFT140Q96RY7 1462 aa29.55■■■□□ 2.32
TKT-213ENST00000487660 ZNF608Q9ULD9 1512 aaPredicted RBP29.54■■■□□ 2.32
TKT-213ENST00000487660 POLA1P09884 1462 aaPredicted RBP29.53■■■□□ 2.32
TKT-213ENST00000487660 DNAJC5Q9H3Z4 198 aa29.51■■■□□ 2.31
TKT-213ENST00000487660 TARBP1Q13395 1621 aaKnown RBP29.5■■■□□ 2.31
TKT-213ENST00000487660 FGD5Q6ZNL6 1462 aa29.45■■■□□ 2.31
TKT-213ENST00000487660 RAD54L2Q9Y4B4 1467 aa29.44■■■□□ 2.3
TKT-213ENST00000487660 EIF4G3O43432 1585 aaKnown RBP29.39■■■□□ 2.3
TKT-213ENST00000487660 SOGA1O94964 1423 aa29.37■■■□□ 2.29
TKT-213ENST00000487660 AQRO60306 1485 aaKnown RBP eCLIP29.33■■■□□ 2.292e-7■■■■□ 24.3
TKT-213ENST00000487660 SYNJ1O43426 1573 aa29.31■■■□□ 2.28
TKT-213ENST00000487660 WRNQ14191 1432 aaPredicted RBP eCLIP29.28■■■□□ 2.28
TKT-213ENST00000487660 BIVM-ERCC5R4GMW8 1640 aa29.28■■■□□ 2.28
TKT-213ENST00000487660 WDR97A6NE52 1622 aa29.27■■■□□ 2.28
TKT-213ENST00000487660 TOP2BQ02880 1626 aa29.26■■■□□ 2.27
TKT-213ENST00000487660 TDRD9Q8NDG6 1382 aaKnown RBP29.25■■■□□ 2.27
TKT-213ENST00000487660 ABCA10Q8WWZ4 1543 aa29.12■■■□□ 2.25
TKT-213ENST00000487660 CHD1O14646 1710 aa29.08■■■□□ 2.25
TKT-213ENST00000487660 ABCA5Q8WWZ7 1642 aa29.07■■■□□ 2.24
TKT-213ENST00000487660 PBRM1Q86U86 1689 aa29.06■■■□□ 2.24
TKT-213ENST00000487660 OSCARQ8IYS5 282 aa29.05■■■□□ 2.24
TKT-213ENST00000487660 SNAPC4Q5SXM2 1469 aa29.04■■■□□ 2.24
TKT-213ENST00000487660 GAPVD1Q14C86 1478 aa29.03■■■□□ 2.24
TKT-213ENST00000487660 GRIN2BQ13224 1484 aa29.01■■■□□ 2.23
TKT-213ENST00000487660 MAGI1Q96QZ7 1491 aaPredicted RBP28.93■■■□□ 2.22
TKT-213ENST00000487660 FBLN2P98095 1184 aa28.93■■■□□ 2.22
TKT-213ENST00000487660 SYNJ2O15056 1496 aa28.84■■■□□ 2.21
TKT-213ENST00000487660 CHMP7Q8WUX9 453 aaPredicted RBP28.8■■■□□ 2.2
TKT-213ENST00000487660 ADAMTS12P58397 1594 aa28.79■■■□□ 2.2
TKT-213ENST00000487660 ERICH3Q5RHP9 1530 aa28.75■■■□□ 2.19
TKT-213ENST00000487660 RIMBP3CA6NJZ7 1639 aa28.72■■■□□ 2.19
TKT-213ENST00000487660 RIMBP3BA6NNM3 1639 aa28.72■■■□□ 2.19
TKT-213ENST00000487660 RIMBP3Q9UFD9 1639 aa28.72■■■□□ 2.19
TKT-213ENST00000487660 CLASP1Q7Z460 1538 aa28.71■■■□□ 2.19
TKT-213ENST00000487660 GRIN2AQ12879 1464 aa28.67■■■□□ 2.18
TKT-213ENST00000487660 ARHGEF11O15085 1522 aa28.67■■■□□ 2.18
TKT-213ENST00000487660 FHAD1B1AJZ9 1412 aa28.66■■■□□ 2.18
TKT-213ENST00000487660 KIF27Q86VH2 1401 aa28.63■■■□□ 2.17
TKT-213ENST00000487660 CEP170Q5SW79 1584 aa28.61■■■□□ 2.17
TKT-213ENST00000487660 IGF1RP08069 1367 aa28.58■■■□□ 2.17
TKT-213ENST00000487660 TRIM41Q8WV44 630 aa28.56■■■□□ 2.16
TKT-213ENST00000487660 NUP160Q12769 1436 aa28.54■■■□□ 2.16
TKT-213ENST00000487660 RUSC2Q8N2Y8 1516 aa28.53■■■□□ 2.16
TKT-213ENST00000487660 CUL7Q14999 1698 aa28.5■■■□□ 2.15
TKT-213ENST00000487660 ARAP1Q96P48 1450 aa28.46■■■□□ 2.15
TKT-213ENST00000487660 ERCC6L2Q5T890 1561 aa28.41■■■□□ 2.14
TKT-213ENST00000487660 CARMIL1Q5VZK9 1371 aa28.38■■■□□ 2.13
TKT-213ENST00000487660 CYB5RLQ6IPT4 315 aa28.38■■■□□ 2.13
TKT-213ENST00000487660 SHROOM2Q13796 1616 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms