RNA–Protein interactions for RNA: ENST00000395123.6

SLC43A3-202, Transcript of solute carrier family 43 member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC43A3, Length 2,619 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-202ENST00000395123 NISCHQ9Y2I1 1504 aa26.54■■□□□ 1.84
SLC43A3-202ENST00000395123 CCDC180Q9P1Z9 1646 aa23.01■■□□□ 1.27
SLC43A3-202ENST00000395123 ZCCHC6Q5VYS8 1495 aaKnown RBP22.4■■□□□ 1.18
SLC43A3-202ENST00000395123 DCAF1Q9Y4B6 1507 aa21.99■■□□□ 1.11
SLC43A3-202ENST00000395123 SHROOM4Q9ULL8 1493 aa21.79■■□□□ 1.08
SLC43A3-202ENST00000395123 MYO15BQ96JP2 1530 aa21.59■■□□□ 1.05
SLC43A3-202ENST00000395123 DCAF8L2P0C7V8 631 aa21.56■■□□□ 1.04
SLC43A3-202ENST00000395123 NACADO15069 1562 aa21.29■■□□□ 1
SLC43A3-202ENST00000395123 ABCC9O60706 1549 aa21.29■■□□□ 1
SLC43A3-202ENST00000395123 SCRIBQ14160 1630 aa21.14■□□□□ 0.97
SLC43A3-202ENST00000395123 SUPT5HO00267 1087 aaKnown RBP21.12■□□□□ 0.97
SLC43A3-202ENST00000395123 RB1CC1Q8TDY2 1594 aa20.99■□□□□ 0.95
SLC43A3-202ENST00000395123 RSF1Q96T23 1441 aaPredicted RBP20.73■□□□□ 0.91
SLC43A3-202ENST00000395123 UNC13AQ9UPW8 1703 aa20.71■□□□□ 0.91
SLC43A3-202ENST00000395123 CECR2Q9BXF3 1484 aa20.58■□□□□ 0.89
SLC43A3-202ENST00000395123 MROH2BQ7Z745 1585 aa20.52■□□□□ 0.88
SLC43A3-202ENST00000395123 CHIC1Q5VXU3 224 aa20.52■□□□□ 0.87
SLC43A3-202ENST00000395123 BAZ1AQ9NRL2 1556 aaPredicted RBP20.45■□□□□ 0.86
SLC43A3-202ENST00000395123 BICRAQ9NZM4 1560 aa20.44■□□□□ 0.86
SLC43A3-202ENST00000395123 WIZO95785 1651 aa20.39■□□□□ 0.85
SLC43A3-202ENST00000395123 SMARCA4P51532 1647 aa20.34■□□□□ 0.85
SLC43A3-202ENST00000395123 TOP2AP11388 1531 aaKnown RBP20.17■□□□□ 0.82
SLC43A3-202ENST00000395123 PEG3Q9GZU2 1588 aa20.12■□□□□ 0.81
SLC43A3-202ENST00000395123 PABPN1Q86U42 306 aaKnown RBP eCLIP20.11■□□□□ 0.81
SLC43A3-202ENST00000395123 EIF4G1Q04637 1599 aaKnown RBP20.09■□□□□ 0.81
SLC43A3-202ENST00000395123 SMARCA2P51531 1590 aa20.02■□□□□ 0.8
SLC43A3-202ENST00000395123 CCDC88BA6NC98 1476 aa19.96■□□□□ 0.79
SLC43A3-202ENST00000395123 ATAD2BQ9ULI0 1458 aa19.88■□□□□ 0.77
SLC43A3-202ENST00000395123 TRIM41Q8WV44 630 aa19.84■□□□□ 0.77
SLC43A3-202ENST00000395123 BAZ1BQ9UIG0 1483 aaKnown RBP19.75■□□□□ 0.75
SLC43A3-202ENST00000395123 LOC105371045A0A1W2PR82 267 aa19.71■□□□□ 0.75
SLC43A3-202ENST00000395123 HMGXB3Q12766 1538 aa19.68■□□□□ 0.74
SLC43A3-202ENST00000395123 ABCC8Q09428 1581 aa19.66■□□□□ 0.74
SLC43A3-202ENST00000395123 NCAPD3P42695 1498 aa19.65■□□□□ 0.74
SLC43A3-202ENST00000395123 FAM9AQ8IZU1 332 aaPredicted RBP19.45■□□□□ 0.7
SLC43A3-202ENST00000395123 WRNQ14191 1432 aaPredicted RBP eCLIP19.45■□□□□ 0.7
SLC43A3-202ENST00000395123 SYNJ1O43426 1573 aa19.43■□□□□ 0.7
SLC43A3-202ENST00000395123 EEA1Q15075 1411 aa19.4■□□□□ 0.7
SLC43A3-202ENST00000395123 SOGA1O94964 1423 aa19.35■□□□□ 0.69
SLC43A3-202ENST00000395123 CC2D2AQ9P2K1 1620 aa19.34■□□□□ 0.69
SLC43A3-202ENST00000395123 PRDM2Q13029 1718 aa19.34■□□□□ 0.69
SLC43A3-202ENST00000395123 BIVM-ERCC5R4GMW8 1640 aa19.33■□□□□ 0.68
SLC43A3-202ENST00000395123 CFTRP13569 1480 aa19.32■□□□□ 0.68
SLC43A3-202ENST00000395123 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
SLC43A3-202ENST00000395123 RUSC2Q8N2Y8 1516 aa19.28■□□□□ 0.68
SLC43A3-202ENST00000395123 CSRNP3Q8WYN3 585 aa19.2■□□□□ 0.66
SLC43A3-202ENST00000395123 KIF21BO75037 1637 aa19.18■□□□□ 0.66
SLC43A3-202ENST00000395123 CUX1P39880 1505 aa19.17■□□□□ 0.66
SLC43A3-202ENST00000395123 PCGF6Q9BYE7 350 aa19.17■□□□□ 0.66
SLC43A3-202ENST00000395123 TNIKQ9UKE5 1360 aa19.16■□□□□ 0.66
SLC43A3-202ENST00000395123 GOLGA3Q08378 1498 aa19.13■□□□□ 0.65
SLC43A3-202ENST00000395123 CADPSQ9ULU8 1353 aa19.13■□□□□ 0.65
SLC43A3-202ENST00000395123 EHMT2Q96KQ7 1210 aa19.12■□□□□ 0.65
SLC43A3-202ENST00000395123 TRIM26Q12899 539 aaPredicted RBP19.11■□□□□ 0.65
SLC43A3-202ENST00000395123 CEP164Q9UPV0 1460 aa19.1■□□□□ 0.65
SLC43A3-202ENST00000395123 CEP162Q5TB80 1403 aa19.07■□□□□ 0.64
SLC43A3-202ENST00000395123 HRCP23327 699 aa19■□□□□ 0.63
SLC43A3-202ENST00000395123 ERICH3Q5RHP9 1530 aa18.97■□□□□ 0.63
SLC43A3-202ENST00000395123 PRXQ9BXM0 1461 aa18.96■□□□□ 0.63
SLC43A3-202ENST00000395123 RAPGEF2Q9Y4G8 1499 aa18.95■□□□□ 0.62
SLC43A3-202ENST00000395123 FANCD2Q9BXW9 1451 aa18.92■□□□□ 0.62
SLC43A3-202ENST00000395123 LAMC3Q9Y6N6 1575 aa18.92■□□□□ 0.62
SLC43A3-202ENST00000395123 UBTFP17480 764 aaKnown RBP18.91■□□□□ 0.62
SLC43A3-202ENST00000395123 KIF27Q86VH2 1401 aa18.91■□□□□ 0.62
SLC43A3-202ENST00000395123 DNMBPQ6XZF7 1577 aa18.87■□□□□ 0.61
SLC43A3-202ENST00000395123 FGD5Q6ZNL6 1462 aa18.86■□□□□ 0.61
SLC43A3-202ENST00000395123 NESP48681 1621 aa18.86■□□□□ 0.61
SLC43A3-202ENST00000395123 CLIP1P30622 1438 aa18.81■□□□□ 0.6
SLC43A3-202ENST00000395123 TOPBP1Q92547 1522 aa18.79■□□□□ 0.6
SLC43A3-202ENST00000395123 CUX2O14529 1486 aa18.78■□□□□ 0.6
SLC43A3-202ENST00000395123 VPS8Q8N3P4 1428 aa18.74■□□□□ 0.59
SLC43A3-202ENST00000395123 IGF1RP08069 1367 aa18.74■□□□□ 0.59
SLC43A3-202ENST00000395123 ABCA10Q8WWZ4 1543 aa18.73■□□□□ 0.59
SLC43A3-202ENST00000395123 POLA1P09884 1462 aaPredicted RBP18.73■□□□□ 0.59
SLC43A3-202ENST00000395123 WDR97A6NE52 1622 aa18.71■□□□□ 0.59
SLC43A3-202ENST00000395123 URB2Q14146 1524 aaKnown RBP18.71■□□□□ 0.59
SLC43A3-202ENST00000395123 DNAJC5BQ9UF47 199 aa18.7■□□□□ 0.58
SLC43A3-202ENST00000395123 PDS5BQ9NTI5 1447 aa18.69■□□□□ 0.58
SLC43A3-202ENST00000395123 KIF21AQ7Z4S6 1674 aa18.69■□□□□ 0.58
SLC43A3-202ENST00000395123 PPARGC1BQ86YN6 1023 aaKnown RBP18.68■□□□□ 0.58
SLC43A3-202ENST00000395123 ARAP1Q96P48 1450 aa18.65■□□□□ 0.58
SLC43A3-202ENST00000395123 RAD54L2Q9Y4B4 1467 aa18.65■□□□□ 0.58
SLC43A3-202ENST00000395123 CARMIL1Q5VZK9 1371 aa18.61■□□□□ 0.57
SLC43A3-202ENST00000395123 CUL7Q14999 1698 aa18.6■□□□□ 0.57
SLC43A3-202ENST00000395123 ABCA5Q8WWZ7 1642 aa18.59■□□□□ 0.57
SLC43A3-202ENST00000395123 ARHGAP35Q9NRY4 1499 aa18.57■□□□□ 0.56
SLC43A3-202ENST00000395123 TARBP1Q13395 1621 aaKnown RBP18.53■□□□□ 0.56
SLC43A3-202ENST00000395123 ZEB1P37275 1124 aaPredicted RBP18.52■□□□□ 0.56
SLC43A3-202ENST00000395123 CTTNBP2Q8WZ74 1663 aa18.48■□□□□ 0.55
SLC43A3-202ENST00000395123 MRC2Q9UBG0 1479 aa18.46■□□□□ 0.55
SLC43A3-202ENST00000395123 GAPVD1Q14C86 1478 aa18.44■□□□□ 0.54
SLC43A3-202ENST00000395123 RANGAP1P46060 587 aaPredicted RBP18.44■□□□□ 0.54
SLC43A3-202ENST00000395123 TTBK1Q5TCY1 1321 aaPredicted RBP18.41■□□□□ 0.54
SLC43A3-202ENST00000395123 MAP3K1Q13233 1512 aa18.4■□□□□ 0.54
SLC43A3-202ENST00000395123 WDR62O43379 1518 aa18.4■□□□□ 0.54
SLC43A3-202ENST00000395123 EFCAB5A4FU69 1503 aa18.4■□□□□ 0.54
SLC43A3-202ENST00000395123 PBRM1Q86U86 1689 aa18.39■□□□□ 0.53
SLC43A3-202ENST00000395123 APLP2Q06481 763 aa18.39■□□□□ 0.53
SLC43A3-202ENST00000395123 TDRD9Q8NDG6 1382 aaKnown RBP18.38■□□□□ 0.53
SLC43A3-202ENST00000395123 TIAM1Q13009 1591 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms