RNA–Protein interactions for RNA: ENST00000369970.7

CLCC1-206, Transcript of chloride channel CLIC like 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CLCC1, Length 2,078 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-206ENST00000369970 NISCHQ9Y2I1 1504 aa22.61■■□□□ 1.21
CLCC1-206ENST00000369970 CCDC180Q9P1Z9 1646 aa20.15■□□□□ 0.82
CLCC1-206ENST00000369970 ABCC9O60706 1549 aa19.78■□□□□ 0.76
CLCC1-206ENST00000369970 RB1CC1Q8TDY2 1594 aa19.01■□□□□ 0.63
CLCC1-206ENST00000369970 NACADO15069 1562 aa18.98■□□□□ 0.63
CLCC1-206ENST00000369970 DCAF8L2P0C7V8 631 aa18.9■□□□□ 0.62
CLCC1-206ENST00000369970 MYO15BQ96JP2 1530 aa18.85■□□□□ 0.61
CLCC1-206ENST00000369970 ZCCHC6Q5VYS8 1495 aaKnown RBP18.81■□□□□ 0.6
CLCC1-206ENST00000369970 DCAF1Q9Y4B6 1507 aa18.73■□□□□ 0.59
CLCC1-206ENST00000369970 UNC13AQ9UPW8 1703 aa18.57■□□□□ 0.56
CLCC1-206ENST00000369970 PABPN1Q86U42 306 aaKnown RBP eCLIP18.47■□□□□ 0.55
CLCC1-206ENST00000369970 BICRAQ9NZM4 1560 aa18.44■□□□□ 0.54
CLCC1-206ENST00000369970 SCRIBQ14160 1630 aa18.34■□□□□ 0.53
CLCC1-206ENST00000369970 DNAJC5BQ9UF47 199 aa18.27■□□□□ 0.51
CLCC1-206ENST00000369970 SHROOM4Q9ULL8 1493 aa18.26■□□□□ 0.51
CLCC1-206ENST00000369970 EIF4G1Q04637 1599 aaKnown RBP17.96■□□□□ 0.47
CLCC1-206ENST00000369970 CC2D2AQ9P2K1 1620 aa17.91■□□□□ 0.46
CLCC1-206ENST00000369970 CECR2Q9BXF3 1484 aa17.8■□□□□ 0.44
CLCC1-206ENST00000369970 SMARCA4P51532 1647 aa17.56■□□□□ 0.4
CLCC1-206ENST00000369970 BAZ1AQ9NRL2 1556 aaPredicted RBP17.53■□□□□ 0.4
CLCC1-206ENST00000369970 NCAPD3P42695 1498 aa17.52■□□□□ 0.39
CLCC1-206ENST00000369970 ATAD2BQ9ULI0 1458 aa17.5■□□□□ 0.39
CLCC1-206ENST00000369970 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
CLCC1-206ENST00000369970 HMGXB3Q12766 1538 aa17.41■□□□□ 0.38
CLCC1-206ENST00000369970 MROH2BQ7Z745 1585 aa17.41■□□□□ 0.38
CLCC1-206ENST00000369970 PEG3Q9GZU2 1588 aa17.41■□□□□ 0.38
CLCC1-206ENST00000369970 BAZ1BQ9UIG0 1483 aaKnown RBP17.34■□□□□ 0.37
CLCC1-206ENST00000369970 WIZO95785 1651 aa17.21■□□□□ 0.35
CLCC1-206ENST00000369970 RSF1Q96T23 1441 aaPredicted RBP17.19■□□□□ 0.34
CLCC1-206ENST00000369970 NESP48681 1621 aa17.09■□□□□ 0.33
CLCC1-206ENST00000369970 LAMC3Q9Y6N6 1575 aa17.07■□□□□ 0.32
CLCC1-206ENST00000369970 ERCC6Q03468 1493 aa17.07■□□□□ 0.32
CLCC1-206ENST00000369970 TOP2AP11388 1531 aaKnown RBP17.04■□□□□ 0.32
CLCC1-206ENST00000369970 CADPSQ9ULU8 1353 aa17■□□□□ 0.31
CLCC1-206ENST00000369970 PDS5BQ9NTI5 1447 aa16.96■□□□□ 0.3
CLCC1-206ENST00000369970 CUX2O14529 1486 aa16.95■□□□□ 0.3
CLCC1-206ENST00000369970 KIF21AQ7Z4S6 1674 aa16.89■□□□□ 0.29
CLCC1-206ENST00000369970 CFTRP13569 1480 aa16.87■□□□□ 0.29
CLCC1-206ENST00000369970 THOC2Q8NI27 1593 aaKnown RBP16.87■□□□□ 0.29
CLCC1-206ENST00000369970 CCDC88BA6NC98 1476 aa16.84■□□□□ 0.29
CLCC1-206ENST00000369970 FANCD2Q9BXW9 1451 aa16.78■□□□□ 0.28
CLCC1-206ENST00000369970 MRC2Q9UBG0 1479 aa16.77■□□□□ 0.28
CLCC1-206ENST00000369970 CEP164Q9UPV0 1460 aa16.77■□□□□ 0.28
CLCC1-206ENST00000369970 PRDM2Q13029 1718 aa16.72■□□□□ 0.27
CLCC1-206ENST00000369970 WDR62O43379 1518 aa16.72■□□□□ 0.27
CLCC1-206ENST00000369970 SUPT5HO00267 1087 aaKnown RBP16.64■□□□□ 0.25
CLCC1-206ENST00000369970 URB2Q14146 1524 aaKnown RBP16.62■□□□□ 0.25
CLCC1-206ENST00000369970 DNAJC5Q9H3Z4 198 aa16.55■□□□□ 0.24
CLCC1-206ENST00000369970 ABCC8Q09428 1581 aa16.53■□□□□ 0.24
CLCC1-206ENST00000369970 TOPBP1Q92547 1522 aa16.51■□□□□ 0.23
CLCC1-206ENST00000369970 DNMBPQ6XZF7 1577 aa16.48■□□□□ 0.23
CLCC1-206ENST00000369970 IFT140Q96RY7 1462 aa16.43■□□□□ 0.22
CLCC1-206ENST00000369970 POLA1P09884 1462 aaPredicted RBP16.36■□□□□ 0.21
CLCC1-206ENST00000369970 ZNF608Q9ULD9 1512 aaPredicted RBP16.35■□□□□ 0.21
CLCC1-206ENST00000369970 CUX1P39880 1505 aa16.34■□□□□ 0.21
CLCC1-206ENST00000369970 TARBP1Q13395 1621 aaKnown RBP16.34■□□□□ 0.21
CLCC1-206ENST00000369970 SOGA1O94964 1423 aa16.3■□□□□ 0.2
CLCC1-206ENST00000369970 FGD5Q6ZNL6 1462 aa16.3■□□□□ 0.2
CLCC1-206ENST00000369970 EIF4G3O43432 1585 aaKnown RBP16.28■□□□□ 0.2
CLCC1-206ENST00000369970 RAD54L2Q9Y4B4 1467 aa16.28■□□□□ 0.2
CLCC1-206ENST00000369970 AQRO60306 1485 aaKnown RBP eCLIP16.25■□□□□ 0.191e-10■■■■■ 41.1
CLCC1-206ENST00000369970 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
CLCC1-206ENST00000369970 WDR97A6NE52 1622 aa16.22■□□□□ 0.19
CLCC1-206ENST00000369970 TDRD9Q8NDG6 1382 aaKnown RBP16.2■□□□□ 0.18
CLCC1-206ENST00000369970 WRNQ14191 1432 aaPredicted RBP eCLIP16.2■□□□□ 0.18
CLCC1-206ENST00000369970 TOP2BQ02880 1626 aa16.18■□□□□ 0.18
CLCC1-206ENST00000369970 BIVM-ERCC5R4GMW8 1640 aa16.18■□□□□ 0.18
CLCC1-206ENST00000369970 ABCA10Q8WWZ4 1543 aa16.15■□□□□ 0.18
CLCC1-206ENST00000369970 SYNJ1O43426 1573 aa16.15■□□□□ 0.18
CLCC1-206ENST00000369970 GRIN2BQ13224 1484 aa16.12■□□□□ 0.17
CLCC1-206ENST00000369970 GAPVD1Q14C86 1478 aa16.1■□□□□ 0.17
CLCC1-206ENST00000369970 SNAPC4Q5SXM2 1469 aa16.09■□□□□ 0.17
CLCC1-206ENST00000369970 MAGI1Q96QZ7 1491 aaPredicted RBP16.09■□□□□ 0.17
CLCC1-206ENST00000369970 CHD1O14646 1710 aa16.09■□□□□ 0.17
CLCC1-206ENST00000369970 ABCA5Q8WWZ7 1642 aa16.08■□□□□ 0.17
CLCC1-206ENST00000369970 FBLN2P98095 1184 aa16.06■□□□□ 0.16
CLCC1-206ENST00000369970 PBRM1Q86U86 1689 aa16.06■□□□□ 0.16
CLCC1-206ENST00000369970 CHMP7Q8WUX9 453 aaPredicted RBP16.03■□□□□ 0.16
CLCC1-206ENST00000369970 SYNJ2O15056 1496 aa16.02■□□□□ 0.16
CLCC1-206ENST00000369970 ERICH3Q5RHP9 1530 aa15.96■□□□□ 0.15
CLCC1-206ENST00000369970 RIMBP3CA6NJZ7 1639 aa15.96■□□□□ 0.15
CLCC1-206ENST00000369970 RIMBP3BA6NNM3 1639 aa15.96■□□□□ 0.15
CLCC1-206ENST00000369970 RIMBP3Q9UFD9 1639 aa15.96■□□□□ 0.15
CLCC1-206ENST00000369970 ARHGEF11O15085 1522 aa15.95■□□□□ 0.14
CLCC1-206ENST00000369970 CLASP1Q7Z460 1538 aa15.94■□□□□ 0.14
CLCC1-206ENST00000369970 ADAMTS12P58397 1594 aa15.93■□□□□ 0.14
CLCC1-206ENST00000369970 TRIM41Q8WV44 630 aa15.93■□□□□ 0.14
CLCC1-206ENST00000369970 FHAD1B1AJZ9 1412 aa15.92■□□□□ 0.14
CLCC1-206ENST00000369970 GRIN2AQ12879 1464 aa15.91■□□□□ 0.14
CLCC1-206ENST00000369970 KIF27Q86VH2 1401 aa15.88■□□□□ 0.13
CLCC1-206ENST00000369970 NUP160Q12769 1436 aa15.85■□□□□ 0.13
CLCC1-206ENST00000369970 IGF1RP08069 1367 aa15.83■□□□□ 0.13
CLCC1-206ENST00000369970 CEP170Q5SW79 1584 aa15.82■□□□□ 0.12
CLCC1-206ENST00000369970 ARAP1Q96P48 1450 aa15.81■□□□□ 0.12
CLCC1-206ENST00000369970 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
CLCC1-206ENST00000369970 CUL7Q14999 1698 aa15.79■□□□□ 0.12
CLCC1-206ENST00000369970 SHROOM2Q13796 1616 aa15.74■□□□□ 0.11
CLCC1-206ENST00000369970 CARMIL1Q5VZK9 1371 aa15.73■□□□□ 0.11
CLCC1-206ENST00000369970 CHIC1Q5VXU3 224 aa15.72■□□□□ 0.11
CLCC1-206ENST00000369970 RUSC2Q8N2Y8 1516 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms