RNA–Protein interactions for RNA: ENST00000356970.6

CLCC1-203, Transcript of chloride channel CLIC like 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLCC1, Length 4,803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-203ENST00000356970 NISCHQ9Y2I1 1504 aa14.9□□□□□ -0.02
CLCC1-203ENST00000356970 SHROOM4Q9ULL8 1493 aa13.01□□□□□ -0.33
CLCC1-203ENST00000356970 SUPT5HO00267 1087 aaKnown RBP12.86□□□□□ -0.35
CLCC1-203ENST00000356970 DCAF8L2P0C7V8 631 aa12.74□□□□□ -0.37
CLCC1-203ENST00000356970 ZCCHC6Q5VYS8 1495 aaKnown RBP12.59□□□□□ -0.39
CLCC1-203ENST00000356970 CCDC180Q9P1Z9 1646 aa12.59□□□□□ -0.39
CLCC1-203ENST00000356970 CHIC1Q5VXU3 224 aa12.35□□□□□ -0.43
CLCC1-203ENST00000356970 PCGF6Q9BYE7 350 aa12.22□□□□□ -0.45
CLCC1-203ENST00000356970 MYO15BQ96JP2 1530 aa12.2□□□□□ -0.46
CLCC1-203ENST00000356970 DCAF1Q9Y4B6 1507 aa12.16□□□□□ -0.46
CLCC1-203ENST00000356970 HRCP23327 699 aa12.16□□□□□ -0.46
CLCC1-203ENST00000356970 LOC105371045A0A1W2PR82 267 aa12.07□□□□□ -0.48
CLCC1-203ENST00000356970 PPARGC1BQ86YN6 1023 aaKnown RBP11.95□□□□□ -0.5
CLCC1-203ENST00000356970 FAM9AQ8IZU1 332 aaPredicted RBP11.93□□□□□ -0.5
CLCC1-203ENST00000356970 TRIM41Q8WV44 630 aa11.93□□□□□ -0.5
CLCC1-203ENST00000356970 EHMT2Q96KQ7 1210 aa11.92□□□□□ -0.5
CLCC1-203ENST00000356970 SCRIBQ14160 1630 aa11.89□□□□□ -0.51
CLCC1-203ENST00000356970 TRIM26Q12899 539 aaPredicted RBP11.89□□□□□ -0.51
CLCC1-203ENST00000356970 ABCC9O60706 1549 aa11.87□□□□□ -0.51
CLCC1-203ENST00000356970 RSF1Q96T23 1441 aaPredicted RBP11.83□□□□□ -0.52
CLCC1-203ENST00000356970 ZEB1P37275 1124 aaPredicted RBP11.72□□□□□ -0.53
CLCC1-203ENST00000356970 RB1CC1Q8TDY2 1594 aa11.71□□□□□ -0.54
CLCC1-203ENST00000356970 CECR2Q9BXF3 1484 aa11.69□□□□□ -0.54
CLCC1-203ENST00000356970 NACADO15069 1562 aa11.65□□□□□ -0.54
CLCC1-203ENST00000356970 MROH2BQ7Z745 1585 aa11.63□□□□□ -0.55
CLCC1-203ENST00000356970 WIZO95785 1651 aa11.56□□□□□ -0.56
CLCC1-203ENST00000356970 TTBK1Q5TCY1 1321 aaPredicted RBP11.55□□□□□ -0.56
CLCC1-203ENST00000356970 CCER1Q8TC90 406 aaPredicted RBP11.51□□□□□ -0.57
CLCC1-203ENST00000356970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.46□□□□□ -0.58
CLCC1-203ENST00000356970 BAZ1AQ9NRL2 1556 aaPredicted RBP11.42□□□□□ -0.58
CLCC1-203ENST00000356970 UBTFP17480 764 aaKnown RBP11.42□□□□□ -0.58
CLCC1-203ENST00000356970 EIF4G1Q04637 1599 aaKnown RBP11.37□□□□□ -0.59
CLCC1-203ENST00000356970 UNC13AQ9UPW8 1703 aa11.37□□□□□ -0.59
CLCC1-203ENST00000356970 PABPN1Q86U42 306 aaKnown RBP eCLIP11.34□□□□□ -0.59
CLCC1-203ENST00000356970 SMARCA4P51532 1647 aa11.33□□□□□ -0.59
CLCC1-203ENST00000356970 CCDC88BA6NC98 1476 aa11.33□□□□□ -0.6
CLCC1-203ENST00000356970 ABCC8Q09428 1581 aa11.32□□□□□ -0.6
CLCC1-203ENST00000356970 TOP2AP11388 1531 aaKnown RBP11.31□□□□□ -0.6
CLCC1-203ENST00000356970 CSRNP3Q8WYN3 585 aa11.3□□□□□ -0.6
CLCC1-203ENST00000356970 SMARCA2P51531 1590 aa11.29□□□□□ -0.6
CLCC1-203ENST00000356970 CEP162Q5TB80 1403 aa11.27□□□□□ -0.6
CLCC1-203ENST00000356970 RANGAP1P46060 587 aaPredicted RBP11.27□□□□□ -0.61
CLCC1-203ENST00000356970 APLP2Q06481 763 aa11.26□□□□□ -0.61
CLCC1-203ENST00000356970 DIEXFQ68CQ4 756 aaKnown RBP11.26□□□□□ -0.61
CLCC1-203ENST00000356970 SOGA1O94964 1423 aa11.25□□□□□ -0.61
CLCC1-203ENST00000356970 SCAF1Q9H7N4 1312 aaKnown RBP11.25□□□□□ -0.61
CLCC1-203ENST00000356970 CENPBP07199 599 aaPredicted RBP11.24□□□□□ -0.61
CLCC1-203ENST00000356970 PELP1Q8IZL8 1130 aaKnown RBP11.23□□□□□ -0.61
CLCC1-203ENST00000356970 BICRAQ9NZM4 1560 aa11.23□□□□□ -0.61
CLCC1-203ENST00000356970 TNIKQ9UKE5 1360 aa11.22□□□□□ -0.61
CLCC1-203ENST00000356970 HNRNPUL2Q1KMD3 747 aaKnown RBP11.21□□□□□ -0.61
CLCC1-203ENST00000356970 RUSC2Q8N2Y8 1516 aa11.2□□□□□ -0.62
CLCC1-203ENST00000356970 EEA1Q15075 1411 aa11.2□□□□□ -0.62
CLCC1-203ENST00000356970 ACIN1Q9UKV3 1341 aaKnown RBP11.17□□□□□ -0.62
CLCC1-203ENST00000356970 GOLGA3Q08378 1498 aa11.17□□□□□ -0.62
CLCC1-203ENST00000356970 WRNQ14191 1432 aaPredicted RBP eCLIP11.17□□□□□ -0.62
CLCC1-203ENST00000356970 NEUROD1Q13562 356 aa11.13□□□□□ -0.63
CLCC1-203ENST00000356970 YTHDC1Q96MU7 727 aaKnown RBP11.13□□□□□ -0.63
CLCC1-203ENST00000356970 ZNF316A6NFI3 1004 aaPredicted RBP11.12□□□□□ -0.63
CLCC1-203ENST00000356970 GTF3C3Q9Y5Q9 886 aa11.1□□□□□ -0.63
CLCC1-203ENST00000356970 PEG3Q9GZU2 1588 aa11.09□□□□□ -0.63
CLCC1-203ENST00000356970 CLIP1P30622 1438 aa11.09□□□□□ -0.63
CLCC1-203ENST00000356970 CEP164Q9UPV0 1460 aa11.08□□□□□ -0.64
CLCC1-203ENST00000356970 ATAD2BQ9ULI0 1458 aa11.06□□□□□ -0.64
CLCC1-203ENST00000356970 SYNJ1O43426 1573 aa11.05□□□□□ -0.64
CLCC1-203ENST00000356970 BAZ1BQ9UIG0 1483 aaKnown RBP11.05□□□□□ -0.64
CLCC1-203ENST00000356970 VPS8Q8N3P4 1428 aa10.98□□□□□ -0.65
CLCC1-203ENST00000356970 RAPGEF2Q9Y4G8 1499 aa10.96□□□□□ -0.65
CLCC1-203ENST00000356970 MIER1Q8N108 512 aa10.95□□□□□ -0.66
CLCC1-203ENST00000356970 ITGAEP38570 1179 aa10.95□□□□□ -0.66
CLCC1-203ENST00000356970 KIF21BO75037 1637 aa10.94□□□□□ -0.66
CLCC1-203ENST00000356970 ATP1B4Q9UN42 357 aaPredicted RBP10.87□□□□□ -0.67
CLCC1-203ENST00000356970 TOP2BQ02880 1626 aa10.87□□□□□ -0.67
CLCC1-203ENST00000356970 KANK4Q5T7N3 995 aaPredicted RBP10.84□□□□□ -0.67
CLCC1-203ENST00000356970 KIF27Q86VH2 1401 aa10.84□□□□□ -0.67
CLCC1-203ENST00000356970 NCAPD3P42695 1498 aa10.82□□□□□ -0.68
CLCC1-203ENST00000356970 BIVM-ERCC5R4GMW8 1640 aa10.82□□□□□ -0.68
CLCC1-203ENST00000356970 CUX1P39880 1505 aa10.81□□□□□ -0.68
CLCC1-203ENST00000356970 PRXQ9BXM0 1461 aa10.8□□□□□ -0.68
CLCC1-203ENST00000356970 CLSPNQ9HAW4 1339 aa10.8□□□□□ -0.68
CLCC1-203ENST00000356970 HMGXB3Q12766 1538 aa10.79□□□□□ -0.68
CLCC1-203ENST00000356970 FAM50AQ14320 339 aaKnown RBP10.78□□□□□ -0.68
CLCC1-203ENST00000356970 DHX57Q6P158 1386 aaKnown RBP10.78□□□□□ -0.68
CLCC1-203ENST00000356970 ARAP1Q96P48 1450 aa10.77□□□□□ -0.69
CLCC1-203ENST00000356970 ERICH3Q5RHP9 1530 aa10.76□□□□□ -0.69
CLCC1-203ENST00000356970 P3H3Q8IVL6 736 aa10.76□□□□□ -0.69
CLCC1-203ENST00000356970 CCNB3Q8WWL7 1395 aa10.75□□□□□ -0.69
CLCC1-203ENST00000356970 CFTRP13569 1480 aa10.75□□□□□ -0.69
CLCC1-203ENST00000356970 CUX2O14529 1486 aa10.73□□□□□ -0.69
CLCC1-203ENST00000356970 MYT1Q01538 1121 aa10.7□□□□□ -0.7
CLCC1-203ENST00000356970 CARMIL1Q5VZK9 1371 aa10.68□□□□□ -0.7
CLCC1-203ENST00000356970 ARHGAP35Q9NRY4 1499 aa10.68□□□□□ -0.7
CLCC1-203ENST00000356970 RRBP1Q9P2E9 1410 aaKnown RBP10.68□□□□□ -0.7
CLCC1-203ENST00000356970 RAB3GAP2Q9H2M9 1393 aa10.66□□□□□ -0.7
CLCC1-203ENST00000356970 IGF1RP08069 1367 aa10.66□□□□□ -0.7
CLCC1-203ENST00000356970 CADPSQ9ULU8 1353 aa10.64□□□□□ -0.71
CLCC1-203ENST00000356970 DDX10Q13206 875 aaKnown RBP10.63□□□□□ -0.71
CLCC1-203ENST00000356970 SIN3AQ96ST3 1273 aa10.63□□□□□ -0.71
CLCC1-203ENST00000356970 SETD5Q9C0A6 1442 aa10.62□□□□□ -0.71
CLCC1-203ENST00000356970 FHAD1B1AJZ9 1412 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms