RNA–Protein interactions for RNA: ENST00000366463.6

FOXRED2-202, Transcript of FAD dependent oxidoreductase domain containing 2, humanhuman

TSL 2

Gene FOXRED2, Length 2,489 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED2-202ENST00000366463 NISCHQ9Y2I1 1504 aa26.1■■□□□ 1.77
FOXRED2-202ENST00000366463 SHROOM4Q9ULL8 1493 aa22.4■■□□□ 1.18
FOXRED2-202ENST00000366463 CCDC180Q9P1Z9 1646 aa22.18■■□□□ 1.14
FOXRED2-202ENST00000366463 ZCCHC6Q5VYS8 1495 aaKnown RBP22.08■■□□□ 1.13
FOXRED2-202ENST00000366463 SUPT5HO00267 1087 aaKnown RBP21.95■■□□□ 1.1
FOXRED2-202ENST00000366463 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
FOXRED2-202ENST00000366463 DCAF1Q9Y4B6 1507 aa21.35■■□□□ 1.01
FOXRED2-202ENST00000366463 CHIC1Q5VXU3 224 aa21.27■□□□□ 0.99
FOXRED2-202ENST00000366463 MYO15BQ96JP2 1530 aa21.24■□□□□ 0.99
FOXRED2-202ENST00000366463 SCRIBQ14160 1630 aa20.89■□□□□ 0.93
FOXRED2-202ENST00000366463 ABCC9O60706 1549 aa20.87■□□□□ 0.93
FOXRED2-202ENST00000366463 LOC105371045A0A1W2PR82 267 aa20.69■□□□□ 0.9
FOXRED2-202ENST00000366463 PCGF6Q9BYE7 350 aa20.68■□□□□ 0.9
FOXRED2-202ENST00000366463 RSF1Q96T23 1441 aaPredicted RBP20.67■□□□□ 0.9
FOXRED2-202ENST00000366463 HRCP23327 699 aa20.63■□□□□ 0.89
FOXRED2-202ENST00000366463 RB1CC1Q8TDY2 1594 aa20.52■□□□□ 0.88
FOXRED2-202ENST00000366463 NACADO15069 1562 aa20.5■□□□□ 0.87
FOXRED2-202ENST00000366463 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
FOXRED2-202ENST00000366463 CECR2Q9BXF3 1484 aa20.4■□□□□ 0.86
FOXRED2-202ENST00000366463 MROH2BQ7Z745 1585 aa20.33■□□□□ 0.84
FOXRED2-202ENST00000366463 FAM9AQ8IZU1 332 aaPredicted RBP20.31■□□□□ 0.84
FOXRED2-202ENST00000366463 PPARGC1BQ86YN6 1023 aaKnown RBP20.28■□□□□ 0.84
FOXRED2-202ENST00000366463 WIZO95785 1651 aa20.25■□□□□ 0.83
FOXRED2-202ENST00000366463 TRIM26Q12899 539 aaPredicted RBP20.22■□□□□ 0.83
FOXRED2-202ENST00000366463 EHMT2Q96KQ7 1210 aa20.2■□□□□ 0.82
FOXRED2-202ENST00000366463 BAZ1AQ9NRL2 1556 aaPredicted RBP20.08■□□□□ 0.81
FOXRED2-202ENST00000366463 UNC13AQ9UPW8 1703 aa19.95■□□□□ 0.78
FOXRED2-202ENST00000366463 EIF4G1Q04637 1599 aaKnown RBP19.93■□□□□ 0.78
FOXRED2-202ENST00000366463 SMARCA4P51532 1647 aa19.91■□□□□ 0.78
FOXRED2-202ENST00000366463 TOP2AP11388 1531 aaKnown RBP19.89■□□□□ 0.77
FOXRED2-202ENST00000366463 ABCC8Q09428 1581 aa19.82■□□□□ 0.76
FOXRED2-202ENST00000366463 CCDC88BA6NC98 1476 aa19.81■□□□□ 0.76
FOXRED2-202ENST00000366463 SMARCA2P51531 1590 aa19.79■□□□□ 0.76
FOXRED2-202ENST00000366463 ZEB1P37275 1124 aaPredicted RBP19.75■□□□□ 0.75
FOXRED2-202ENST00000366463 PABPN1Q86U42 306 aaKnown RBP eCLIP19.75■□□□□ 0.75
FOXRED2-202ENST00000366463 BICRAQ9NZM4 1560 aa19.65■□□□□ 0.74
FOXRED2-202ENST00000366463 SOGA1O94964 1423 aa19.61■□□□□ 0.73
FOXRED2-202ENST00000366463 TTBK1Q5TCY1 1321 aaPredicted RBP19.55■□□□□ 0.72
FOXRED2-202ENST00000366463 CEP162Q5TB80 1403 aa19.52■□□□□ 0.72
FOXRED2-202ENST00000366463 RUSC2Q8N2Y8 1516 aa19.52■□□□□ 0.72
FOXRED2-202ENST00000366463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.49■□□□□ 0.71
FOXRED2-202ENST00000366463 CSRNP3Q8WYN3 585 aa19.47■□□□□ 0.71
FOXRED2-202ENST00000366463 PEG3Q9GZU2 1588 aa19.46■□□□□ 0.71
FOXRED2-202ENST00000366463 UBTFP17480 764 aaKnown RBP19.46■□□□□ 0.71
FOXRED2-202ENST00000366463 WRNQ14191 1432 aaPredicted RBP eCLIP19.44■□□□□ 0.7
FOXRED2-202ENST00000366463 TNIKQ9UKE5 1360 aa19.44■□□□□ 0.7
FOXRED2-202ENST00000366463 EEA1Q15075 1411 aa19.43■□□□□ 0.7
FOXRED2-202ENST00000366463 CCER1Q8TC90 406 aaPredicted RBP19.43■□□□□ 0.7
FOXRED2-202ENST00000366463 ATAD2BQ9ULI0 1458 aa19.38■□□□□ 0.69
FOXRED2-202ENST00000366463 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
FOXRED2-202ENST00000366463 GOLGA3Q08378 1498 aa19.36■□□□□ 0.69
FOXRED2-202ENST00000366463 BAZ1BQ9UIG0 1483 aaKnown RBP19.36■□□□□ 0.69
FOXRED2-202ENST00000366463 CEP164Q9UPV0 1460 aa19.24■□□□□ 0.67
FOXRED2-202ENST00000366463 KIF21BO75037 1637 aa19.21■□□□□ 0.67
FOXRED2-202ENST00000366463 CLIP1P30622 1438 aa19.16■□□□□ 0.66
FOXRED2-202ENST00000366463 RANGAP1P46060 587 aaPredicted RBP19.15■□□□□ 0.66
FOXRED2-202ENST00000366463 RAPGEF2Q9Y4G8 1499 aa19.13■□□□□ 0.65
FOXRED2-202ENST00000366463 TOP2BQ02880 1626 aa19.09■□□□□ 0.65
FOXRED2-202ENST00000366463 VPS8Q8N3P4 1428 aa19.05■□□□□ 0.64
FOXRED2-202ENST00000366463 HNRNPUL2Q1KMD3 747 aaKnown RBP19.05■□□□□ 0.64
FOXRED2-202ENST00000366463 SCAF1Q9H7N4 1312 aaKnown RBP19.04■□□□□ 0.64
FOXRED2-202ENST00000366463 DIEXFQ68CQ4 756 aaKnown RBP19.02■□□□□ 0.64
FOXRED2-202ENST00000366463 BIVM-ERCC5R4GMW8 1640 aa19.02■□□□□ 0.63
FOXRED2-202ENST00000366463 APLP2Q06481 763 aa19.01■□□□□ 0.63
FOXRED2-202ENST00000366463 HMGXB3Q12766 1538 aa18.97■□□□□ 0.63
FOXRED2-202ENST00000366463 NCAPD3P42695 1498 aa18.96■□□□□ 0.63
FOXRED2-202ENST00000366463 CUX1P39880 1505 aa18.93■□□□□ 0.62
FOXRED2-202ENST00000366463 ERICH3Q5RHP9 1530 aa18.89■□□□□ 0.61
FOXRED2-202ENST00000366463 PRXQ9BXM0 1461 aa18.89■□□□□ 0.61
FOXRED2-202ENST00000366463 ZNF316A6NFI3 1004 aaPredicted RBP18.85■□□□□ 0.61
FOXRED2-202ENST00000366463 NEUROD1Q13562 356 aa18.84■□□□□ 0.61
FOXRED2-202ENST00000366463 ACIN1Q9UKV3 1341 aaKnown RBP18.84■□□□□ 0.61
FOXRED2-202ENST00000366463 ARAP1Q96P48 1450 aa18.84■□□□□ 0.61
FOXRED2-202ENST00000366463 KIF27Q86VH2 1401 aa18.83■□□□□ 0.61
FOXRED2-202ENST00000366463 CFTRP13569 1480 aa18.83■□□□□ 0.61
FOXRED2-202ENST00000366463 KANK4Q5T7N3 995 aaPredicted RBP18.76■□□□□ 0.59
FOXRED2-202ENST00000366463 CENPBP07199 599 aaPredicted RBP18.75■□□□□ 0.59
FOXRED2-202ENST00000366463 PRDM2Q13029 1718 aa18.72■□□□□ 0.59
FOXRED2-202ENST00000366463 CUX2O14529 1486 aa18.68■□□□□ 0.58
FOXRED2-202ENST00000366463 ARHGAP35Q9NRY4 1499 aa18.67■□□□□ 0.58
FOXRED2-202ENST00000366463 YTHDC1Q96MU7 727 aaKnown RBP18.66■□□□□ 0.58
FOXRED2-202ENST00000366463 GTF3C3Q9Y5Q9 886 aa18.66■□□□□ 0.58
FOXRED2-202ENST00000366463 CADPSQ9ULU8 1353 aa18.63■□□□□ 0.57
FOXRED2-202ENST00000366463 MIER1Q8N108 512 aa18.61■□□□□ 0.57
FOXRED2-202ENST00000366463 DHX57Q6P158 1386 aaKnown RBP18.61■□□□□ 0.57
FOXRED2-202ENST00000366463 IGF1RP08069 1367 aa18.61■□□□□ 0.57
FOXRED2-202ENST00000366463 FGD5Q6ZNL6 1462 aa18.6■□□□□ 0.57
FOXRED2-202ENST00000366463 RRBP1Q9P2E9 1410 aaKnown RBP18.58■□□□□ 0.57
FOXRED2-202ENST00000366463 ITGAEP38570 1179 aa18.58■□□□□ 0.56
FOXRED2-202ENST00000366463 CARMIL1Q5VZK9 1371 aa18.55■□□□□ 0.56
FOXRED2-202ENST00000366463 CC2D2AQ9P2K1 1620 aa18.55■□□□□ 0.56
FOXRED2-202ENST00000366463 CCNB3Q8WWL7 1395 aa18.54■□□□□ 0.56
FOXRED2-202ENST00000366463 PELP1Q8IZL8 1130 aaKnown RBP18.54■□□□□ 0.56
FOXRED2-202ENST00000366463 CLSPNQ9HAW4 1339 aa18.52■□□□□ 0.56
FOXRED2-202ENST00000366463 FANCD2Q9BXW9 1451 aa18.48■□□□□ 0.55
FOXRED2-202ENST00000366463 TIAM1Q13009 1591 aa18.47■□□□□ 0.55
FOXRED2-202ENST00000366463 P3H3Q8IVL6 736 aa18.46■□□□□ 0.55
FOXRED2-202ENST00000366463 ATP1B4Q9UN42 357 aaPredicted RBP18.43■□□□□ 0.54
FOXRED2-202ENST00000366463 RAD54L2Q9Y4B4 1467 aa18.43■□□□□ 0.54
FOXRED2-202ENST00000366463 LRRC9Q6ZRR7 1453 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms