RNA–Protein interactions for RNA: ENST00000549183.1

TUBA1C-204, Transcript of tubulin alpha 1c, humanhuman

TSL 2 BASIC

Gene TUBA1C, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-204ENST00000549183 NISCHQ9Y2I1 1504 aa22.89■■□□□ 1.26
TUBA1C-204ENST00000549183 AEBP2Q6ZN18 517 aaPredicted RBP21.19■□□□□ 0.98
TUBA1C-204ENST00000549183 CCDC180Q9P1Z9 1646 aa20.64■□□□□ 0.89
TUBA1C-204ENST00000549183 ABCC9O60706 1549 aa20.63■□□□□ 0.89
TUBA1C-204ENST00000549183 CHIC1Q5VXU3 224 aa19.78■□□□□ 0.76
TUBA1C-204ENST00000549183 RB1CC1Q8TDY2 1594 aa19.64■□□□□ 0.73
TUBA1C-204ENST00000549183 NACADO15069 1562 aa19.46■□□□□ 0.71
TUBA1C-204ENST00000549183 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
TUBA1C-204ENST00000549183 DCAF8L2P0C7V8 631 aa19.38■□□□□ 0.69
TUBA1C-204ENST00000549183 UNC13AQ9UPW8 1703 aa19.35■□□□□ 0.69
TUBA1C-204ENST00000549183 PABPN1Q86U42 306 aaKnown RBP eCLIP19.16■□□□□ 0.66
TUBA1C-204ENST00000549183 MYO15BQ96JP2 1530 aa19.15■□□□□ 0.66
TUBA1C-204ENST00000549183 BICRAQ9NZM4 1560 aa19.1■□□□□ 0.65
TUBA1C-204ENST00000549183 ZCCHC6Q5VYS8 1495 aaKnown RBP18.98■□□□□ 0.63
TUBA1C-204ENST00000549183 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
TUBA1C-204ENST00000549183 SHROOM4Q9ULL8 1493 aa18.82■□□□□ 0.6
TUBA1C-204ENST00000549183 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
TUBA1C-204ENST00000549183 CC2D2AQ9P2K1 1620 aa18.71■□□□□ 0.59
TUBA1C-204ENST00000549183 EIF4G1Q04637 1599 aaKnown RBP18.63■□□□□ 0.57
TUBA1C-204ENST00000549183 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
TUBA1C-204ENST00000549183 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.49
TUBA1C-204ENST00000549183 DNAJC5Q9H3Z4 198 aa18■□□□□ 0.47
TUBA1C-204ENST00000549183 NCAPD3P42695 1498 aa17.93■□□□□ 0.46
TUBA1C-204ENST00000549183 CUX2O14529 1486 aa17.89■□□□□ 0.45
TUBA1C-204ENST00000549183 SMARCA4P51532 1647 aa17.89■□□□□ 0.45
TUBA1C-204ENST00000549183 ATAD2BQ9ULI0 1458 aa17.85■□□□□ 0.45
TUBA1C-204ENST00000549183 PHF23Q9BUL5 403 aaPredicted RBP17.84■□□□□ 0.45
TUBA1C-204ENST00000549183 HMGXB3Q12766 1538 aa17.83■□□□□ 0.45
TUBA1C-204ENST00000549183 SMARCA2P51531 1590 aa17.82■□□□□ 0.44
TUBA1C-204ENST00000549183 ERCC6Q03468 1493 aa17.81■□□□□ 0.44
TUBA1C-204ENST00000549183 BAZ1AQ9NRL2 1556 aaPredicted RBP17.74■□□□□ 0.43
TUBA1C-204ENST00000549183 MROH2BQ7Z745 1585 aa17.7■□□□□ 0.42
TUBA1C-204ENST00000549183 NESP48681 1621 aa17.7■□□□□ 0.42
TUBA1C-204ENST00000549183 PEG3Q9GZU2 1588 aa17.7■□□□□ 0.42
TUBA1C-204ENST00000549183 BAZ1BQ9UIG0 1483 aaKnown RBP17.69■□□□□ 0.42
TUBA1C-204ENST00000549183 THOC2Q8NI27 1593 aaKnown RBP17.65■□□□□ 0.42
TUBA1C-204ENST00000549183 LAMC3Q9Y6N6 1575 aa17.62■□□□□ 0.41
TUBA1C-204ENST00000549183 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.41
TUBA1C-204ENST00000549183 WIZO95785 1651 aa17.55■□□□□ 0.4
TUBA1C-204ENST00000549183 PDS5BQ9NTI5 1447 aa17.42■□□□□ 0.38
TUBA1C-204ENST00000549183 WDR62O43379 1518 aa17.33■□□□□ 0.37
TUBA1C-204ENST00000549183 CADPSQ9ULU8 1353 aa17.33■□□□□ 0.36
TUBA1C-204ENST00000549183 MRC2Q9UBG0 1479 aa17.32■□□□□ 0.36
TUBA1C-204ENST00000549183 RSF1Q96T23 1441 aaPredicted RBP17.3■□□□□ 0.36
TUBA1C-204ENST00000549183 TOP2AP11388 1531 aaKnown RBP17.23■□□□□ 0.35
TUBA1C-204ENST00000549183 CEP164Q9UPV0 1460 aa17.21■□□□□ 0.35
TUBA1C-204ENST00000549183 FANCD2Q9BXW9 1451 aa17.17■□□□□ 0.34
TUBA1C-204ENST00000549183 PRDM2Q13029 1718 aa17.16■□□□□ 0.34
TUBA1C-204ENST00000549183 CFTRP13569 1480 aa17.14■□□□□ 0.33
TUBA1C-204ENST00000549183 TRIM41Q8WV44 630 aa17.09■□□□□ 0.33
TUBA1C-204ENST00000549183 URB2Q14146 1524 aaKnown RBP17.06■□□□□ 0.32
TUBA1C-204ENST00000549183 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
TUBA1C-204ENST00000549183 FOXD1Q16676 465 aa16.99■□□□□ 0.31
TUBA1C-204ENST00000549183 OSCARQ8IYS5 282 aa16.95■□□□□ 0.3
TUBA1C-204ENST00000549183 RIMBP3CA6NJZ7 1639 aa16.89■□□□□ 0.29
TUBA1C-204ENST00000549183 RIMBP3BA6NNM3 1639 aa16.89■□□□□ 0.29
TUBA1C-204ENST00000549183 RIMBP3Q9UFD9 1639 aa16.89■□□□□ 0.29
TUBA1C-204ENST00000549183 ZNF608Q9ULD9 1512 aaPredicted RBP16.87■□□□□ 0.29
TUBA1C-204ENST00000549183 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
TUBA1C-204ENST00000549183 TOPBP1Q92547 1522 aa16.86■□□□□ 0.29
TUBA1C-204ENST00000549183 EIF4G3O43432 1585 aaKnown RBP16.84■□□□□ 0.29
TUBA1C-204ENST00000549183 DNMBPQ6XZF7 1577 aa16.8■□□□□ 0.28
TUBA1C-204ENST00000549183 CHD1O14646 1710 aa16.79■□□□□ 0.28
TUBA1C-204ENST00000549183 ABCC8Q09428 1581 aa16.79■□□□□ 0.28
TUBA1C-204ENST00000549183 ARHGEF11O15085 1522 aa16.78■□□□□ 0.28
TUBA1C-204ENST00000549183 TARBP1Q13395 1621 aaKnown RBP16.77■□□□□ 0.27
TUBA1C-204ENST00000549183 AQRO60306 1485 aaKnown RBP eCLIP16.7■□□□□ 0.266e-11■■■□□ 19.2
TUBA1C-204ENST00000549183 POLA1P09884 1462 aaPredicted RBP16.69■□□□□ 0.26
TUBA1C-204ENST00000549183 RAD54L2Q9Y4B4 1467 aa16.68■□□□□ 0.26
TUBA1C-204ENST00000549183 SUPT5HO00267 1087 aaKnown RBP16.65■□□□□ 0.26
TUBA1C-204ENST00000549183 CUX1P39880 1505 aa16.62■□□□□ 0.25
TUBA1C-204ENST00000549183 FGD5Q6ZNL6 1462 aa16.61■□□□□ 0.25
TUBA1C-204ENST00000549183 TDRD9Q8NDG6 1382 aaKnown RBP16.61■□□□□ 0.25
TUBA1C-204ENST00000549183 WDR97A6NE52 1622 aa16.6■□□□□ 0.25
TUBA1C-204ENST00000549183 SOGA1O94964 1423 aa16.6■□□□□ 0.25
TUBA1C-204ENST00000549183 ARAP1Q96P48 1450 aa16.6■□□□□ 0.25
TUBA1C-204ENST00000549183 FBLN2P98095 1184 aa16.58■□□□□ 0.24
TUBA1C-204ENST00000549183 POTEDQ86YR6 584 aa16.58■□□□□ 0.24
TUBA1C-204ENST00000549183 CYB5RLQ6IPT4 315 aa16.54■□□□□ 0.24
TUBA1C-204ENST00000549183 CLASP1Q7Z460 1538 aa16.54■□□□□ 0.24
TUBA1C-204ENST00000549183 SNAPC4Q5SXM2 1469 aa16.53■□□□□ 0.24
TUBA1C-204ENST00000549183 PBRM1Q86U86 1689 aa16.5■□□□□ 0.23
TUBA1C-204ENST00000549183 SYNJ1O43426 1573 aa16.49■□□□□ 0.23
TUBA1C-204ENST00000549183 MAGI1Q96QZ7 1491 aaPredicted RBP16.48■□□□□ 0.23
TUBA1C-204ENST00000549183 GRIN2BQ13224 1484 aa16.43■□□□□ 0.22
TUBA1C-204ENST00000549183 CHMP7Q8WUX9 453 aaPredicted RBP16.41■□□□□ 0.22
TUBA1C-204ENST00000549183 SYNJ2O15056 1496 aa16.41■□□□□ 0.22
TUBA1C-204ENST00000549183 TRHP20396 242 aaPredicted RBP16.4■□□□□ 0.22
TUBA1C-204ENST00000549183 ABCA5Q8WWZ7 1642 aa16.4■□□□□ 0.22
TUBA1C-204ENST00000549183 GAPVD1Q14C86 1478 aa16.4■□□□□ 0.22
TUBA1C-204ENST00000549183 ABCA10Q8WWZ4 1543 aa16.37■□□□□ 0.21
TUBA1C-204ENST00000549183 BIVM-ERCC5R4GMW8 1640 aa16.36■□□□□ 0.21
TUBA1C-204ENST00000549183 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
TUBA1C-204ENST00000549183 WRNQ14191 1432 aaPredicted RBP eCLIP16.31■□□□□ 0.21e-11■□□□□ 11.1
TUBA1C-204ENST00000549183 ADAMTS12P58397 1594 aa16.28■□□□□ 0.2
TUBA1C-204ENST00000549183 ERCC6L2Q5T890 1561 aa16.26■□□□□ 0.19
TUBA1C-204ENST00000549183 CEP170Q5SW79 1584 aa16.25■□□□□ 0.19
TUBA1C-204ENST00000549183 GRIN2AQ12879 1464 aa16.24■□□□□ 0.19
TUBA1C-204ENST00000549183 SHROOM2Q13796 1616 aa16.23■□□□□ 0.19
TUBA1C-204ENST00000549183 NUP160Q12769 1436 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms