RNA–Protein interactions for RNA: ENST00000528395.1

TMX2-CTNND1-201, Transcript of TMX2-CTNND1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMX2-CTNND1, Length 585 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1-201ENST00000528395 NISCHQ9Y2I1 1504 aa27.28■■□□□ 1.96
TMX2-CTNND1-201ENST00000528395 CCDC180Q9P1Z9 1646 aa24.24■■□□□ 1.47
TMX2-CTNND1-201ENST00000528395 ABCC9O60706 1549 aa23.69■■□□□ 1.38
TMX2-CTNND1-201ENST00000528395 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
TMX2-CTNND1-201ENST00000528395 NACADO15069 1562 aa22.83■■□□□ 1.25
TMX2-CTNND1-201ENST00000528395 DCAF8L2P0C7V8 631 aa22.77■■□□□ 1.24
TMX2-CTNND1-201ENST00000528395 MYO15BQ96JP2 1530 aa22.73■■□□□ 1.23
TMX2-CTNND1-201ENST00000528395 ZCCHC6Q5VYS8 1495 aaKnown RBP22.72■■□□□ 1.23
TMX2-CTNND1-201ENST00000528395 DCAF1Q9Y4B6 1507 aa22.62■■□□□ 1.21
TMX2-CTNND1-201ENST00000528395 UNC13AQ9UPW8 1703 aa22.24■■□□□ 1.15
TMX2-CTNND1-201ENST00000528395 PABPN1Q86U42 306 aaKnown RBP eCLIP22.15■■□□□ 1.14
TMX2-CTNND1-201ENST00000528395 BICRAQ9NZM4 1560 aa22.11■■□□□ 1.13
TMX2-CTNND1-201ENST00000528395 SCRIBQ14160 1630 aa22.06■■□□□ 1.12
TMX2-CTNND1-201ENST00000528395 SHROOM4Q9ULL8 1493 aa21.97■■□□□ 1.11
TMX2-CTNND1-201ENST00000528395 DNAJC5BQ9UF47 199 aa21.77■■□□□ 1.08
TMX2-CTNND1-201ENST00000528395 EIF4G1Q04637 1599 aaKnown RBP21.54■■□□□ 1.04
TMX2-CTNND1-201ENST00000528395 CC2D2AQ9P2K1 1620 aa21.44■■□□□ 1.02
TMX2-CTNND1-201ENST00000528395 CECR2Q9BXF3 1484 aa21.32■■□□□ 1
TMX2-CTNND1-201ENST00000528395 BAZ1AQ9NRL2 1556 aaPredicted RBP21.14■□□□□ 0.98
TMX2-CTNND1-201ENST00000528395 SMARCA4P51532 1647 aa21.14■□□□□ 0.97
TMX2-CTNND1-201ENST00000528395 NCAPD3P42695 1498 aa21.08■□□□□ 0.97
TMX2-CTNND1-201ENST00000528395 ATAD2BQ9ULI0 1458 aa21.07■□□□□ 0.96
TMX2-CTNND1-201ENST00000528395 SMARCA2P51531 1590 aa21.05■□□□□ 0.96
TMX2-CTNND1-201ENST00000528395 MROH2BQ7Z745 1585 aa20.99■□□□□ 0.95
TMX2-CTNND1-201ENST00000528395 PEG3Q9GZU2 1588 aa20.98■□□□□ 0.95
TMX2-CTNND1-201ENST00000528395 HMGXB3Q12766 1538 aa20.95■□□□□ 0.94
TMX2-CTNND1-201ENST00000528395 BAZ1BQ9UIG0 1483 aaKnown RBP20.88■□□□□ 0.93
TMX2-CTNND1-201ENST00000528395 RSF1Q96T23 1441 aaPredicted RBP20.78■□□□□ 0.92
TMX2-CTNND1-201ENST00000528395 WIZO95785 1651 aa20.73■□□□□ 0.91
TMX2-CTNND1-201ENST00000528395 TOP2AP11388 1531 aaKnown RBP20.56■□□□□ 0.88
TMX2-CTNND1-201ENST00000528395 LAMC3Q9Y6N6 1575 aa20.5■□□□□ 0.87
TMX2-CTNND1-201ENST00000528395 NESP48681 1621 aa20.49■□□□□ 0.87
TMX2-CTNND1-201ENST00000528395 CADPSQ9ULU8 1353 aa20.46■□□□□ 0.87
TMX2-CTNND1-201ENST00000528395 ERCC6Q03468 1493 aa20.44■□□□□ 0.86
TMX2-CTNND1-201ENST00000528395 PDS5BQ9NTI5 1447 aa20.39■□□□□ 0.85
TMX2-CTNND1-201ENST00000528395 CFTRP13569 1480 aa20.33■□□□□ 0.85
TMX2-CTNND1-201ENST00000528395 CCDC88BA6NC98 1476 aa20.32■□□□□ 0.84
TMX2-CTNND1-201ENST00000528395 CUX2O14529 1486 aa20.27■□□□□ 0.84
TMX2-CTNND1-201ENST00000528395 KIF21AQ7Z4S6 1674 aa20.23■□□□□ 0.83
TMX2-CTNND1-201ENST00000528395 SUPT5HO00267 1087 aaKnown RBP20.22■□□□□ 0.83
TMX2-CTNND1-201ENST00000528395 FANCD2Q9BXW9 1451 aa20.19■□□□□ 0.82
TMX2-CTNND1-201ENST00000528395 THOC2Q8NI27 1593 aaKnown RBP20.19■□□□□ 0.82
TMX2-CTNND1-201ENST00000528395 CEP164Q9UPV0 1460 aa20.17■□□□□ 0.82
TMX2-CTNND1-201ENST00000528395 MRC2Q9UBG0 1479 aa20.14■□□□□ 0.81
TMX2-CTNND1-201ENST00000528395 PRDM2Q13029 1718 aa20.11■□□□□ 0.81
TMX2-CTNND1-201ENST00000528395 WDR62O43379 1518 aa20.07■□□□□ 0.8
TMX2-CTNND1-201ENST00000528395 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
TMX2-CTNND1-201ENST00000528395 ABCC8Q09428 1581 aa19.93■□□□□ 0.78
TMX2-CTNND1-201ENST00000528395 TOPBP1Q92547 1522 aa19.86■□□□□ 0.77
TMX2-CTNND1-201ENST00000528395 DNMBPQ6XZF7 1577 aa19.84■□□□□ 0.77
TMX2-CTNND1-201ENST00000528395 IFT140Q96RY7 1462 aa19.77■□□□□ 0.76
TMX2-CTNND1-201ENST00000528395 POLA1P09884 1462 aaPredicted RBP19.69■□□□□ 0.74
TMX2-CTNND1-201ENST00000528395 CUX1P39880 1505 aa19.69■□□□□ 0.74
TMX2-CTNND1-201ENST00000528395 DNAJC5Q9H3Z4 198 aa19.67■□□□□ 0.74
TMX2-CTNND1-201ENST00000528395 SOGA1O94964 1423 aa19.64■□□□□ 0.73
TMX2-CTNND1-201ENST00000528395 TARBP1Q13395 1621 aaKnown RBP19.64■□□□□ 0.73
TMX2-CTNND1-201ENST00000528395 ZNF608Q9ULD9 1512 aaPredicted RBP19.63■□□□□ 0.73
TMX2-CTNND1-201ENST00000528395 FGD5Q6ZNL6 1462 aa19.63■□□□□ 0.73
TMX2-CTNND1-201ENST00000528395 WRNQ14191 1432 aaPredicted RBP eCLIP19.59■□□□□ 0.73
TMX2-CTNND1-201ENST00000528395 RAD54L2Q9Y4B4 1467 aa19.59■□□□□ 0.73
TMX2-CTNND1-201ENST00000528395 EIF4G3O43432 1585 aaKnown RBP19.54■□□□□ 0.72
TMX2-CTNND1-201ENST00000528395 TOP2BQ02880 1626 aa19.54■□□□□ 0.72
TMX2-CTNND1-201ENST00000528395 AQRO60306 1485 aaKnown RBP eCLIP19.54■□□□□ 0.728e-8■■■□□ 14.7
TMX2-CTNND1-201ENST00000528395 WDR97A6NE52 1622 aa19.53■□□□□ 0.72
TMX2-CTNND1-201ENST00000528395 BIVM-ERCC5R4GMW8 1640 aa19.52■□□□□ 0.72
TMX2-CTNND1-201ENST00000528395 TDRD9Q8NDG6 1382 aaKnown RBP19.5■□□□□ 0.71
TMX2-CTNND1-201ENST00000528395 SYNJ1O43426 1573 aa19.49■□□□□ 0.71
TMX2-CTNND1-201ENST00000528395 ABCA10Q8WWZ4 1543 aa19.48■□□□□ 0.71
TMX2-CTNND1-201ENST00000528395 OSCARQ8IYS5 282 aa19.45■□□□□ 0.7
TMX2-CTNND1-201ENST00000528395 GRIN2BQ13224 1484 aa19.41■□□□□ 0.7
TMX2-CTNND1-201ENST00000528395 GAPVD1Q14C86 1478 aa19.4■□□□□ 0.7
TMX2-CTNND1-201ENST00000528395 ABCA5Q8WWZ7 1642 aa19.36■□□□□ 0.69
TMX2-CTNND1-201ENST00000528395 MAGI1Q96QZ7 1491 aaPredicted RBP19.36■□□□□ 0.69
TMX2-CTNND1-201ENST00000528395 SNAPC4Q5SXM2 1469 aa19.35■□□□□ 0.69
TMX2-CTNND1-201ENST00000528395 FBLN2P98095 1184 aa19.31■□□□□ 0.68
TMX2-CTNND1-201ENST00000528395 PBRM1Q86U86 1689 aa19.3■□□□□ 0.68
TMX2-CTNND1-201ENST00000528395 CHMP7Q8WUX9 453 aaPredicted RBP19.29■□□□□ 0.68
TMX2-CTNND1-201ENST00000528395 CHD1O14646 1710 aa19.28■□□□□ 0.68
TMX2-CTNND1-201ENST00000528395 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
TMX2-CTNND1-201ENST00000528395 ERICH3Q5RHP9 1530 aa19.25■□□□□ 0.67
TMX2-CTNND1-201ENST00000528395 KIF27Q86VH2 1401 aa19.2■□□□□ 0.66
TMX2-CTNND1-201ENST00000528395 FHAD1B1AJZ9 1412 aa19.19■□□□□ 0.66
TMX2-CTNND1-201ENST00000528395 ADAMTS12P58397 1594 aa19.17■□□□□ 0.66
TMX2-CTNND1-201ENST00000528395 TRIM41Q8WV44 630 aa19.14■□□□□ 0.65
TMX2-CTNND1-201ENST00000528395 GRIN2AQ12879 1464 aa19.14■□□□□ 0.65
TMX2-CTNND1-201ENST00000528395 IGF1RP08069 1367 aa19.13■□□□□ 0.65
TMX2-CTNND1-201ENST00000528395 CLASP1Q7Z460 1538 aa19.11■□□□□ 0.65
TMX2-CTNND1-201ENST00000528395 ARHGEF11O15085 1522 aa19.08■□□□□ 0.64
TMX2-CTNND1-201ENST00000528395 NUP160Q12769 1436 aa19.08■□□□□ 0.64
TMX2-CTNND1-201ENST00000528395 RIMBP3CA6NJZ7 1639 aa19.06■□□□□ 0.64
TMX2-CTNND1-201ENST00000528395 RIMBP3BA6NNM3 1639 aa19.06■□□□□ 0.64
TMX2-CTNND1-201ENST00000528395 RIMBP3Q9UFD9 1639 aa19.06■□□□□ 0.64
TMX2-CTNND1-201ENST00000528395 CUL7Q14999 1698 aa19.05■□□□□ 0.64
TMX2-CTNND1-201ENST00000528395 CEP170Q5SW79 1584 aa19.02■□□□□ 0.63
TMX2-CTNND1-201ENST00000528395 CARMIL1Q5VZK9 1371 aa19.01■□□□□ 0.63
TMX2-CTNND1-201ENST00000528395 RUSC2Q8N2Y8 1516 aa18.96■□□□□ 0.63
TMX2-CTNND1-201ENST00000528395 CYB5RLQ6IPT4 315 aa18.92■□□□□ 0.62
TMX2-CTNND1-201ENST00000528395 ARAP1Q96P48 1450 aa18.91■□□□□ 0.62
TMX2-CTNND1-201ENST00000528395 JPH4Q96JJ6 628 aa18.91■□□□□ 0.62
TMX2-CTNND1-201ENST00000528395 SHROOM2Q13796 1616 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms