RNA–Protein interactions for RNA: ENST00000369976.5

CLCC1-207, Transcript of chloride channel CLIC like 1, humanhuman

TSL 2 BASIC

Gene CLCC1, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-207ENST00000369976 NISCHQ9Y2I1 1504 aa27.4■■□□□ 1.98
CLCC1-207ENST00000369976 CCDC180Q9P1Z9 1646 aa23.62■■□□□ 1.37
CLCC1-207ENST00000369976 ZCCHC6Q5VYS8 1495 aaKnown RBP23.11■■□□□ 1.29
CLCC1-207ENST00000369976 SHROOM4Q9ULL8 1493 aa22.91■■□□□ 1.26
CLCC1-207ENST00000369976 DCAF8L2P0C7V8 631 aa22.68■■□□□ 1.22
CLCC1-207ENST00000369976 DCAF1Q9Y4B6 1507 aa22.54■■□□□ 1.2
CLCC1-207ENST00000369976 SUPT5HO00267 1087 aaKnown RBP22.22■■□□□ 1.15
CLCC1-207ENST00000369976 ABCC9O60706 1549 aa22.12■■□□□ 1.13
CLCC1-207ENST00000369976 MYO15BQ96JP2 1530 aa22.06■■□□□ 1.12
CLCC1-207ENST00000369976 SCRIBQ14160 1630 aa21.97■■□□□ 1.11
CLCC1-207ENST00000369976 NACADO15069 1562 aa21.88■■□□□ 1.09
CLCC1-207ENST00000369976 RB1CC1Q8TDY2 1594 aa21.63■■□□□ 1.05
CLCC1-207ENST00000369976 RSF1Q96T23 1441 aaPredicted RBP21.46■■□□□ 1.03
CLCC1-207ENST00000369976 CHIC1Q5VXU3 224 aa21.41■■□□□ 1.02
CLCC1-207ENST00000369976 CECR2Q9BXF3 1484 aa21.35■■□□□ 1.01
CLCC1-207ENST00000369976 UNC13AQ9UPW8 1703 aa21.33■■□□□ 1.01
CLCC1-207ENST00000369976 MROH2BQ7Z745 1585 aa21.26■□□□□ 0.99
CLCC1-207ENST00000369976 WIZO95785 1651 aa21.15■□□□□ 0.98
CLCC1-207ENST00000369976 BAZ1AQ9NRL2 1556 aaPredicted RBP21.1■□□□□ 0.97
CLCC1-207ENST00000369976 BICRAQ9NZM4 1560 aa21.03■□□□□ 0.96
CLCC1-207ENST00000369976 SMARCA4P51532 1647 aa21■□□□□ 0.95
CLCC1-207ENST00000369976 PABPN1Q86U42 306 aaKnown RBP eCLIP20.99■□□□□ 0.95
CLCC1-207ENST00000369976 TOP2AP11388 1531 aaKnown RBP20.84■□□□□ 0.93
CLCC1-207ENST00000369976 TRIM41Q8WV44 630 aa20.76■□□□□ 0.91
CLCC1-207ENST00000369976 LOC105371045A0A1W2PR82 267 aa20.71■□□□□ 0.91
CLCC1-207ENST00000369976 EIF4G1Q04637 1599 aaKnown RBP20.71■□□□□ 0.91
CLCC1-207ENST00000369976 SMARCA2P51531 1590 aa20.7■□□□□ 0.9
CLCC1-207ENST00000369976 CCDC88BA6NC98 1476 aa20.68■□□□□ 0.9
CLCC1-207ENST00000369976 PEG3Q9GZU2 1588 aa20.63■□□□□ 0.89
CLCC1-207ENST00000369976 FAM9AQ8IZU1 332 aaPredicted RBP20.53■□□□□ 0.88
CLCC1-207ENST00000369976 ATAD2BQ9ULI0 1458 aa20.52■□□□□ 0.88
CLCC1-207ENST00000369976 ABCC8Q09428 1581 aa20.48■□□□□ 0.87
CLCC1-207ENST00000369976 BAZ1BQ9UIG0 1483 aaKnown RBP20.45■□□□□ 0.86
CLCC1-207ENST00000369976 EHMT2Q96KQ7 1210 aa20.34■□□□□ 0.85
CLCC1-207ENST00000369976 PCGF6Q9BYE7 350 aa20.24■□□□□ 0.83
CLCC1-207ENST00000369976 HMGXB3Q12766 1538 aa20.23■□□□□ 0.83
CLCC1-207ENST00000369976 NCAPD3P42695 1498 aa20.2■□□□□ 0.82
CLCC1-207ENST00000369976 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
CLCC1-207ENST00000369976 SOGA1O94964 1423 aa20.16■□□□□ 0.82
CLCC1-207ENST00000369976 SYNJ1O43426 1573 aa20.15■□□□□ 0.82
CLCC1-207ENST00000369976 RUSC2Q8N2Y8 1516 aa20.09■□□□□ 0.81
CLCC1-207ENST00000369976 EEA1Q15075 1411 aa20.04■□□□□ 0.8
CLCC1-207ENST00000369976 TRIM26Q12899 539 aaPredicted RBP20■□□□□ 0.79
CLCC1-207ENST00000369976 CSRNP3Q8WYN3 585 aa19.97■□□□□ 0.79
CLCC1-207ENST00000369976 CC2D2AQ9P2K1 1620 aa19.97■□□□□ 0.79
CLCC1-207ENST00000369976 HRCP23327 699 aa19.95■□□□□ 0.78
CLCC1-207ENST00000369976 TOP2BQ02880 1626 aa19.95■□□□□ 0.78
CLCC1-207ENST00000369976 BIVM-ERCC5R4GMW8 1640 aa19.92■□□□□ 0.78
CLCC1-207ENST00000369976 CFTRP13569 1480 aa19.92■□□□□ 0.78
CLCC1-207ENST00000369976 GOLGA3Q08378 1498 aa19.87■□□□□ 0.77
CLCC1-207ENST00000369976 CEP162Q5TB80 1403 aa19.87■□□□□ 0.77
CLCC1-207ENST00000369976 TNIKQ9UKE5 1360 aa19.87■□□□□ 0.77
CLCC1-207ENST00000369976 PRDM2Q13029 1718 aa19.86■□□□□ 0.77
CLCC1-207ENST00000369976 CUX1P39880 1505 aa19.84■□□□□ 0.77
CLCC1-207ENST00000369976 UBTFP17480 764 aaKnown RBP19.83■□□□□ 0.77
CLCC1-207ENST00000369976 KIF21BO75037 1637 aa19.83■□□□□ 0.76
CLCC1-207ENST00000369976 CEP164Q9UPV0 1460 aa19.81■□□□□ 0.76
CLCC1-207ENST00000369976 PPARGC1BQ86YN6 1023 aaKnown RBP19.8■□□□□ 0.76
CLCC1-207ENST00000369976 CADPSQ9ULU8 1353 aa19.76■□□□□ 0.75
CLCC1-207ENST00000369976 RAPGEF2Q9Y4G8 1499 aa19.71■□□□□ 0.75
CLCC1-207ENST00000369976 KIF27Q86VH2 1401 aa19.6■□□□□ 0.73
CLCC1-207ENST00000369976 CLIP1P30622 1438 aa19.6■□□□□ 0.73
CLCC1-207ENST00000369976 PRXQ9BXM0 1461 aa19.59■□□□□ 0.73
CLCC1-207ENST00000369976 FANCD2Q9BXW9 1451 aa19.59■□□□□ 0.73
CLCC1-207ENST00000369976 TTBK1Q5TCY1 1321 aaPredicted RBP19.58■□□□□ 0.73
CLCC1-207ENST00000369976 ERICH3Q5RHP9 1530 aa19.58■□□□□ 0.72
CLCC1-207ENST00000369976 NESP48681 1621 aa19.58■□□□□ 0.72
CLCC1-207ENST00000369976 FGD5Q6ZNL6 1462 aa19.55■□□□□ 0.72
CLCC1-207ENST00000369976 RANGAP1P46060 587 aaPredicted RBP19.53■□□□□ 0.72
CLCC1-207ENST00000369976 CUX2O14529 1486 aa19.52■□□□□ 0.71
CLCC1-207ENST00000369976 VPS8Q8N3P4 1428 aa19.47■□□□□ 0.71
CLCC1-207ENST00000369976 DNMBPQ6XZF7 1577 aa19.47■□□□□ 0.71
CLCC1-207ENST00000369976 LAMC3Q9Y6N6 1575 aa19.46■□□□□ 0.71
CLCC1-207ENST00000369976 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
CLCC1-207ENST00000369976 TOPBP1Q92547 1522 aa19.43■□□□□ 0.7
CLCC1-207ENST00000369976 IGF1RP08069 1367 aa19.4■□□□□ 0.7
CLCC1-207ENST00000369976 POLA1P09884 1462 aaPredicted RBP19.38■□□□□ 0.69
CLCC1-207ENST00000369976 RAD54L2Q9Y4B4 1467 aa19.38■□□□□ 0.69
CLCC1-207ENST00000369976 ARAP1Q96P48 1450 aa19.37■□□□□ 0.69
CLCC1-207ENST00000369976 ZEB1P37275 1124 aaPredicted RBP19.36■□□□□ 0.69
CLCC1-207ENST00000369976 URB2Q14146 1524 aaKnown RBP19.34■□□□□ 0.69
CLCC1-207ENST00000369976 ABCA10Q8WWZ4 1543 aa19.32■□□□□ 0.68
CLCC1-207ENST00000369976 KIF21AQ7Z4S6 1674 aa19.32■□□□□ 0.68
CLCC1-207ENST00000369976 CARMIL1Q5VZK9 1371 aa19.32■□□□□ 0.68
CLCC1-207ENST00000369976 PDS5BQ9NTI5 1447 aa19.3■□□□□ 0.68
CLCC1-207ENST00000369976 APLP2Q06481 763 aa19.29■□□□□ 0.68
CLCC1-207ENST00000369976 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.28■□□□□ 0.68
CLCC1-207ENST00000369976 ARHGAP35Q9NRY4 1499 aa19.27■□□□□ 0.68
CLCC1-207ENST00000369976 WDR97A6NE52 1622 aa19.26■□□□□ 0.67
CLCC1-207ENST00000369976 CCER1Q8TC90 406 aaPredicted RBP19.2■□□□□ 0.66
CLCC1-207ENST00000369976 CUL7Q14999 1698 aa19.19■□□□□ 0.66
CLCC1-207ENST00000369976 ABCA5Q8WWZ7 1642 aa19.16■□□□□ 0.66
CLCC1-207ENST00000369976 TDRD9Q8NDG6 1382 aaKnown RBP19.14■□□□□ 0.65
CLCC1-207ENST00000369976 KANK4Q5T7N3 995 aaPredicted RBP19.12■□□□□ 0.65
CLCC1-207ENST00000369976 HNRNPUL2Q1KMD3 747 aaKnown RBP19.11■□□□□ 0.65
CLCC1-207ENST00000369976 CTTNBP2Q8WZ74 1663 aa19.1■□□□□ 0.65
CLCC1-207ENST00000369976 GAPVD1Q14C86 1478 aa19.1■□□□□ 0.65
CLCC1-207ENST00000369976 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
CLCC1-207ENST00000369976 MRC2Q9UBG0 1479 aa19.06■□□□□ 0.64
CLCC1-207ENST00000369976 P3H3Q8IVL6 736 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms