Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.273e-8■■□□□ 14.5
SND1Q7KZF4 TUSC3-212ENST00000511783 1203 ntTSL 58.42□□□□□ -1.063e-8■■□□□ 14.5
SND1Q7KZF4 TUSC3-206ENST00000507400 727 ntTSL 56.47□□□□□ -1.373e-8■■□□□ 14.5
SND1Q7KZF4 TUSC3-202ENST00000503191 731 ntTSL 35.82□□□□□ -1.483e-8■■□□□ 14.5
SND1Q7KZF4 GUSB-210ENST00000475316 505 ntTSL 39.36□□□□□ -0.918e-7■■□□□ 14.5
SND1Q7KZF4 TF-202ENST00000414694 546 ntTSL 419.57■□□□□ 0.723e-19■■□□□ 14.5
SND1Q7KZF4 TF-206ENST00000466911 526 ntTSL 416.56■□□□□ 0.243e-19■■□□□ 14.5
SND1Q7KZF4 TFP1-201ENST00000460564 572 ntTSL 4 BASIC7.22□□□□□ -1.253e-19■■□□□ 14.5
SND1Q7KZF4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.567e-9■■□□□ 14.5
SND1Q7KZF4 TNFRSF12A-203ENST00000571351 1678 ntTSL 221.18■□□□□ 0.987e-9■■□□□ 14.5
SND1Q7KZF4 TNFRSF12A-205ENST00000574699 583 ntTSL 219.99■□□□□ 0.797e-9■■□□□ 14.5
SND1Q7KZF4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.99■□□□□ 0.797e-9■■□□□ 14.5
SND1Q7KZF4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.02■□□□□ 0.167e-9■■□□□ 14.5
SND1Q7KZF4 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC12.93□□□□□ -0.347e-9■■□□□ 14.5
SND1Q7KZF4 SLC43A3-205ENST00000525205 862 ntTSL 310.94□□□□□ -0.661e-9■■□□□ 14.5
SND1Q7KZF4 VEGFA-214ENST00000493786 551 ntTSL 27.95□□□□□ -1.147e-9■■□□□ 14.5
SND1Q7KZF4 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.121e-7■■□□□ 14.5
SND1Q7KZF4 PGD-202ENST00000460189 767 ntTSL 213.81□□□□□ -0.29e-8■■□□□ 14.5
SND1Q7KZF4 PGD-205ENST00000483936 680 ntTSL 512.03□□□□□ -0.489e-8■■□□□ 14.5
SND1Q7KZF4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.515e-19■■□□□ 14.5
SND1Q7KZF4 VIM-207ENST00000495528 962 ntTSL 29.93□□□□□ -0.823e-10■■□□□ 14.5
SND1Q7KZF4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.253e-7■■□□□ 14.5
SND1Q7KZF4 OSTC-204ENST00000512478 663 ntTSL 5 BASIC7.84□□□□□ -1.153e-7■■□□□ 14.5
SND1Q7KZF4 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.64□□□□□ -1.353e-7■■□□□ 14.5
SND1Q7KZF4 LTBP4-206ENST00000546155 1285 ntTSL 220.78■□□□□ 0.922e-6■■□□□ 14.5
SND1Q7KZF4 HIST1H2BG-201ENST00000541790 1534 ntAPPRIS P1 BASIC12.35□□□□□ -0.438e-34■■□□□ 14.5
SND1Q7KZF4 SLC52A2-206ENST00000526779 881 ntTSL 520.05■□□□□ 0.81e-8■■□□□ 14.5
SND1Q7KZF4 DDB1-213ENST00000539332 1767 ntTSL 29.5□□□□□ -0.893e-6■■□□□ 14.4
SND1Q7KZF4 LBR-207ENST00000487054 731 ntTSL 310.45□□□□□ -0.741e-6■■□□□ 14.4
SND1Q7KZF4 CFB-278ENST00000472581 1059 ntTSL 216.08■□□□□ 0.164e-19■■□□□ 14.4
SND1Q7KZF4 CFB-279ENST00000475617 586 ntTSL 47.71□□□□□ -1.184e-19■■□□□ 14.4
SND1Q7KZF4 C2-213ENST00000484636 542 ntTSL 414.9□□□□□ -0.024e-10■■□□□ 14.4
SND1Q7KZF4 HACD2-205ENST00000493515 529 ntTSL 38.62□□□□□ -1.037e-10■■□□□ 14.4
SND1Q7KZF4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.825e-7■■□□□ 14.4
SND1Q7KZF4 CD46-219ENST00000636114 2098 ntTSL 53.88□□□□□ -1.792e-11■■□□□ 14.4
SND1Q7KZF4 ATG9A-215ENST00000446716 5245 ntTSL 219.58■□□□□ 0.723e-7■■□□□ 14.4
SND1Q7KZF4 ABCB6-202ENST00000295750 2238 ntTSL 519.2■□□□□ 0.663e-7■■□□□ 14.4
SND1Q7KZF4 ABCB6-205ENST00000448398 882 ntTSL 518.72■□□□□ 0.592e-7■■□□□ 14.4
SND1Q7KZF4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.473e-7■■□□□ 14.4
SND1Q7KZF4 ABCB6-203ENST00000417678 793 ntTSL 517.68■□□□□ 0.422e-7■■□□□ 14.4
SND1Q7KZF4 ABCB6-206ENST00000452545 544 ntTSL 417.07■□□□□ 0.322e-7■■□□□ 14.4
SND1Q7KZF4 CEACAM1-209ENST00000465051 321 ntTSL 26.38□□□□□ -1.391e-10■■□□□ 14.4
SND1Q7KZF4 NDUFS3-211ENST00000533507 1769 ntTSL 227.61■■■□□ 2.016e-7■■□□□ 14.4
SND1Q7KZF4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.73■■□□□ 1.716e-7■■□□□ 14.4
SND1Q7KZF4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.15■■□□□ 1.466e-7■■□□□ 14.4
SND1Q7KZF4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.33■■□□□ 1.336e-7■■□□□ 14.4
SND1Q7KZF4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.146e-7■■□□□ 14.4
SND1Q7KZF4 SEMA4B-215ENST00000560089 2804 ntTSL 1 (best)21.47■■□□□ 1.036e-7■■□□□ 14.4
SND1Q7KZF4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 16e-7■■□□□ 14.4
SND1Q7KZF4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.06■□□□□ 0.86e-7■■□□□ 14.4
SND1Q7KZF4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.86■□□□□ 0.616e-7■■□□□ 14.4
SND1Q7KZF4 PSMC3-208ENST00000530887 891 ntTSL 218.86■□□□□ 0.616e-7■■□□□ 14.4
SND1Q7KZF4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.67■□□□□ 0.586e-7■■□□□ 14.4
SND1Q7KZF4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.566e-7■■□□□ 14.4
SND1Q7KZF4 SEPT2-211ENST00000421717 818 ntTSL 418.05■□□□□ 0.486e-7■■□□□ 14.4
SND1Q7KZF4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.336e-7■■□□□ 14.4
SND1Q7KZF4 AL133352.1-201ENST00000529568 1952 ntAPPRIS ALT2 TSL 216.84■□□□□ 0.296e-7■■□□□ 14.4
SND1Q7KZF4 AL133352.1-202ENST00000527595 1423 ntAPPRIS ALT2 TSL 216.62■□□□□ 0.256e-7■■□□□ 14.4
SND1Q7KZF4 SEMA4B-208ENST00000559074 1697 ntTSL 216.23■□□□□ 0.196e-7■■□□□ 14.4
SND1Q7KZF4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.176e-7■■□□□ 14.4
SND1Q7KZF4 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.166e-7■■□□□ 14.4
SND1Q7KZF4 PSMC3-202ENST00000524447 935 ntTSL 315.75■□□□□ 0.116e-7■■□□□ 14.4
SND1Q7KZF4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.43■□□□□ 0.066e-7■■□□□ 14.4
SND1Q7KZF4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.046e-7■■□□□ 14.4
SND1Q7KZF4 SEMA4B-207ENST00000558975 382 ntTSL 414.94□□□□□ -0.026e-7■■□□□ 14.4
SND1Q7KZF4 SLC43A3-222ENST00000533051 571 ntTSL 214.82□□□□□ -0.042e-9■■□□□ 14.4
SND1Q7KZF4 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.096e-7■■□□□ 14.4
SND1Q7KZF4 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.166e-7■■□□□ 14.4
SND1Q7KZF4 SLC6A19-202ENST00000515652 3337 ntTSL 213.58□□□□□ -0.246e-7■■□□□ 14.4
SND1Q7KZF4 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.266e-7■■□□□ 14.4
SND1Q7KZF4 PSMC3-210ENST00000531051 777 ntTSL 513.15□□□□□ -0.36e-7■■□□□ 14.4
SND1Q7KZF4 NDUFB8-203ENST00000370322 713 ntTSL 2 BASIC12.99□□□□□ -0.336e-7■■□□□ 14.4
SND1Q7KZF4 PSMC3-207ENST00000530651 905 ntTSL 512.9□□□□□ -0.346e-7■■□□□ 14.4
SND1Q7KZF4 AL133352.1-205ENST00000533549 582 ntAPPRIS ALT2 TSL 412.83□□□□□ -0.366e-7■■□□□ 14.4
SND1Q7KZF4 SEMA4B-204ENST00000558065 3751 ntTSL 1 (best)12.17□□□□□ -0.466e-7■■□□□ 14.4
SND1Q7KZF4 NDUFS3-204ENST00000525378 779 ntTSL 212.11□□□□□ -0.476e-7■■□□□ 14.4
SND1Q7KZF4 SEPT2-201ENST00000360051 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.486e-7■■□□□ 14.4
SND1Q7KZF4 CNIH1-206ENST00000557659 856 ntTSL 211.97□□□□□ -0.492e-16■■□□□ 14.4
SND1Q7KZF4 SEPT2-237ENST00000481500 756 ntTSL 211.67□□□□□ -0.546e-7■■□□□ 14.4
SND1Q7KZF4 CNIH1-202ENST00000395573 1233 ntTSL 1 (best) BASIC11.38□□□□□ -0.592e-16■■□□□ 14.4
SND1Q7KZF4 CNIH1-207ENST00000557690 838 ntTSL 3 BASIC11.38□□□□□ -0.592e-16■■□□□ 14.4
SND1Q7KZF4 CNIH1-204ENST00000554683 787 ntTSL 311.08□□□□□ -0.642e-16■■□□□ 14.4
SND1Q7KZF4 NDUFB8-204ENST00000464651 390 ntTSL 211.07□□□□□ -0.646e-7■■□□□ 14.4
SND1Q7KZF4 CNIH1-203ENST00000553660 785 ntTSL 2 BASIC10.99□□□□□ -0.652e-16■■□□□ 14.4
SND1Q7KZF4 SEPT2-206ENST00000402092 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.686e-7■■□□□ 14.4
SND1Q7KZF4 AL133352.1-204ENST00000528174 538 ntAPPRIS ALT2 TSL 310.13□□□□□ -0.796e-7■■□□□ 14.4
SND1Q7KZF4 NDUFS3-205ENST00000527178 269 ntTSL 29.04□□□□□ -0.966e-7■■□□□ 14.4
SND1Q7KZF4 SEPT2-239ENST00000484167 668 ntTSL 29.03□□□□□ -0.966e-7■■□□□ 14.4
SND1Q7KZF4 SEPT2-228ENST00000464128 565 ntTSL 48.61□□□□□ -1.036e-7■■□□□ 14.4
SND1Q7KZF4 NDUFS3-203ENST00000525212 530 ntTSL 28.35□□□□□ -1.076e-7■■□□□ 14.4
SND1Q7KZF4 GOT2-204ENST00000494627 889 ntTSL 28.06□□□□□ -1.126e-7■■□□□ 14.4
SND1Q7KZF4 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.82□□□□□ -1.162e-16■■□□□ 14.4
SND1Q7KZF4 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.32e-16■■□□□ 14.4
SND1Q7KZF4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.351e-6■■□□□ 14.4
SND1Q7KZF4 DDB1-217ENST00000540166 3906 ntTSL 29.69□□□□□ -0.861e-6■■□□□ 14.4
SND1Q7KZF4 SLC37A4-207ENST00000525787 1058 ntTSL 210.24□□□□□ -0.771e-9■■□□□ 14.4
SND1Q7KZF4 ATP1A1-209ENST00000491156 666 ntTSL 28.63□□□□□ -1.036e-19■■□□□ 14.4
SND1Q7KZF4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.216e-10■■□□□ 14.4
SND1Q7KZF4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.03■□□□□ 0.86e-10■■□□□ 14.4
SND1Q7KZF4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.09■□□□□ 0.656e-10■■□□□ 14.4
Retrieved 100 of 13,567 protein–RNA pairs in 197.1 ms