RNA–Protein interactions for RNA: ENST00000525378.5

NDUFS3-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 779 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-204ENST00000525378 NISCHQ9Y2I1 1504 aa29.54■■■□□ 2.32
NDUFS3-204ENST00000525378 ABCC9O60706 1549 aa26.52■■□□□ 1.84
NDUFS3-204ENST00000525378 CCDC180Q9P1Z9 1646 aa26.52■■□□□ 1.84
NDUFS3-204ENST00000525378 RB1CC1Q8TDY2 1594 aa25.22■■□□□ 1.63
NDUFS3-204ENST00000525378 NACADO15069 1562 aa25.05■■□□□ 1.6
NDUFS3-204ENST00000525378 DCAF8L2P0C7V8 631 aa24.91■■□□□ 1.58
NDUFS3-204ENST00000525378 DNAJC5BQ9UF47 199 aa24.9■■□□□ 1.58
NDUFS3-204ENST00000525378 UNC13AQ9UPW8 1703 aa24.78■■□□□ 1.56
NDUFS3-204ENST00000525378 PABPN1Q86U42 306 aaKnown RBP eCLIP24.69■■□□□ 1.54
NDUFS3-204ENST00000525378 MYO15BQ96JP2 1530 aa24.68■■□□□ 1.54
NDUFS3-204ENST00000525378 BICRAQ9NZM4 1560 aa24.54■■□□□ 1.52
NDUFS3-204ENST00000525378 ZCCHC6Q5VYS8 1495 aaKnown RBP24.48■■□□□ 1.51
NDUFS3-204ENST00000525378 DCAF1Q9Y4B6 1507 aa24.38■■□□□ 1.49
NDUFS3-204ENST00000525378 SCRIBQ14160 1630 aa24.18■■□□□ 1.46
NDUFS3-204ENST00000525378 SHROOM4Q9ULL8 1493 aa24.12■■□□□ 1.45
NDUFS3-204ENST00000525378 CC2D2AQ9P2K1 1620 aa23.98■■□□□ 1.43
NDUFS3-204ENST00000525378 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
NDUFS3-204ENST00000525378 CECR2Q9BXF3 1484 aa23.87■■□□□ 1.41
NDUFS3-204ENST00000525378 NCAPD3P42695 1498 aa23.11■■□□□ 1.29
NDUFS3-204ENST00000525378 SMARCA4P51532 1647 aa23.07■■□□□ 1.28
NDUFS3-204ENST00000525378 ATAD2BQ9ULI0 1458 aa23.06■■□□□ 1.28
NDUFS3-204ENST00000525378 SMARCA2P51531 1590 aa22.98■■□□□ 1.27
NDUFS3-204ENST00000525378 HMGXB3Q12766 1538 aa22.96■■□□□ 1.27
NDUFS3-204ENST00000525378 BAZ1AQ9NRL2 1556 aaPredicted RBP22.92■■□□□ 1.26
NDUFS3-204ENST00000525378 ERCC6Q03468 1493 aa22.86■■□□□ 1.25
NDUFS3-204ENST00000525378 BAZ1BQ9UIG0 1483 aaKnown RBP22.83■■□□□ 1.25
NDUFS3-204ENST00000525378 PEG3Q9GZU2 1588 aa22.82■■□□□ 1.24
NDUFS3-204ENST00000525378 CUX2O14529 1486 aa22.82■■□□□ 1.24
NDUFS3-204ENST00000525378 DNAJC5Q9H3Z4 198 aa22.81■■□□□ 1.24
NDUFS3-204ENST00000525378 NESP48681 1621 aa22.8■■□□□ 1.24
NDUFS3-204ENST00000525378 MROH2BQ7Z745 1585 aa22.78■■□□□ 1.24
NDUFS3-204ENST00000525378 LAMC3Q9Y6N6 1575 aa22.61■■□□□ 1.21
NDUFS3-204ENST00000525378 THOC2Q8NI27 1593 aaKnown RBP22.58■■□□□ 1.2
NDUFS3-204ENST00000525378 WIZO95785 1651 aa22.55■■□□□ 1.2
NDUFS3-204ENST00000525378 KIF21AQ7Z4S6 1674 aa22.55■■□□□ 1.2
NDUFS3-204ENST00000525378 PDS5BQ9NTI5 1447 aa22.44■■□□□ 1.18
NDUFS3-204ENST00000525378 CADPSQ9ULU8 1353 aa22.41■■□□□ 1.18
NDUFS3-204ENST00000525378 RSF1Q96T23 1441 aaPredicted RBP22.29■■□□□ 1.16
NDUFS3-204ENST00000525378 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
NDUFS3-204ENST00000525378 WDR62O43379 1518 aa22.24■■□□□ 1.15
NDUFS3-204ENST00000525378 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
NDUFS3-204ENST00000525378 CEP164Q9UPV0 1460 aa22.19■■□□□ 1.14
NDUFS3-204ENST00000525378 FANCD2Q9BXW9 1451 aa22.17■■□□□ 1.14
NDUFS3-204ENST00000525378 CFTRP13569 1480 aa22.16■■□□□ 1.14
NDUFS3-204ENST00000525378 PRDM2Q13029 1718 aa22.03■■□□□ 1.12
NDUFS3-204ENST00000525378 URB2Q14146 1524 aaKnown RBP22.01■■□□□ 1.11
NDUFS3-204ENST00000525378 CCDC88BA6NC98 1476 aa21.96■■□□□ 1.11
NDUFS3-204ENST00000525378 TRIM41Q8WV44 630 aa21.83■■□□□ 1.09
NDUFS3-204ENST00000525378 OSCARQ8IYS5 282 aa21.77■■□□□ 1.08
NDUFS3-204ENST00000525378 TOPBP1Q92547 1522 aa21.76■■□□□ 1.07
NDUFS3-204ENST00000525378 ZNF608Q9ULD9 1512 aaPredicted RBP21.74■■□□□ 1.07
NDUFS3-204ENST00000525378 IFT140Q96RY7 1462 aa21.73■■□□□ 1.07
NDUFS3-204ENST00000525378 DNMBPQ6XZF7 1577 aa21.68■■□□□ 1.06
NDUFS3-204ENST00000525378 ABCC8Q09428 1581 aa21.67■■□□□ 1.06
NDUFS3-204ENST00000525378 EIF4G3O43432 1585 aaKnown RBP21.63■■□□□ 1.05
NDUFS3-204ENST00000525378 TARBP1Q13395 1621 aaKnown RBP21.59■■□□□ 1.05
NDUFS3-204ENST00000525378 RIMBP3CA6NJZ7 1639 aa21.56■■□□□ 1.04
NDUFS3-204ENST00000525378 RIMBP3BA6NNM3 1639 aa21.56■■□□□ 1.04
NDUFS3-204ENST00000525378 RIMBP3Q9UFD9 1639 aa21.56■■□□□ 1.04
NDUFS3-204ENST00000525378 POLA1P09884 1462 aaPredicted RBP21.54■■□□□ 1.04
NDUFS3-204ENST00000525378 AQRO60306 1485 aaKnown RBP eCLIP21.53■■□□□ 1.04
NDUFS3-204ENST00000525378 CHD1O14646 1710 aa21.52■■□□□ 1.03
NDUFS3-204ENST00000525378 RAD54L2Q9Y4B4 1467 aa21.48■■□□□ 1.03
NDUFS3-204ENST00000525378 ARHGEF11O15085 1522 aa21.46■■□□□ 1.03
NDUFS3-204ENST00000525378 SOGA1O94964 1423 aa21.42■■□□□ 1.02
NDUFS3-204ENST00000525378 FGD5Q6ZNL6 1462 aa21.41■■□□□ 1.02
NDUFS3-204ENST00000525378 CUX1P39880 1505 aa21.4■■□□□ 1.02
NDUFS3-204ENST00000525378 TDRD9Q8NDG6 1382 aaKnown RBP21.39■■□□□ 1.02
NDUFS3-204ENST00000525378 FBLN2P98095 1184 aa21.36■■□□□ 1.01
NDUFS3-204ENST00000525378 WDR97A6NE52 1622 aa21.33■■□□□ 1
NDUFS3-204ENST00000525378 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
NDUFS3-204ENST00000525378 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
NDUFS3-204ENST00000525378 CYB5RLQ6IPT4 315 aa21.28■■□□□ 1
NDUFS3-204ENST00000525378 ARAP1Q96P48 1450 aa21.26■□□□□ 0.99
NDUFS3-204ENST00000525378 GRIN2BQ13224 1484 aa21.23■□□□□ 0.99
NDUFS3-204ENST00000525378 MAGI1Q96QZ7 1491 aaPredicted RBP21.23■□□□□ 0.99
NDUFS3-204ENST00000525378 PBRM1Q86U86 1689 aa21.23■□□□□ 0.99
NDUFS3-204ENST00000525378 CLASP1Q7Z460 1538 aa21.21■□□□□ 0.99
NDUFS3-204ENST00000525378 CHMP7Q8WUX9 453 aaPredicted RBP21.2■□□□□ 0.98
NDUFS3-204ENST00000525378 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
NDUFS3-204ENST00000525378 GAPVD1Q14C86 1478 aa21.17■□□□□ 0.98
NDUFS3-204ENST00000525378 SYNJ2O15056 1496 aa21.16■□□□□ 0.98
NDUFS3-204ENST00000525378 ABCA5Q8WWZ7 1642 aa21.15■□□□□ 0.98
NDUFS3-204ENST00000525378 ABCA10Q8WWZ4 1543 aa21.15■□□□□ 0.98
NDUFS3-204ENST00000525378 BIVM-ERCC5R4GMW8 1640 aa21.07■□□□□ 0.96
NDUFS3-204ENST00000525378 TOP2BQ02880 1626 aa21.05■□□□□ 0.96
NDUFS3-204ENST00000525378 TRHP20396 242 aaPredicted RBP21.04■□□□□ 0.96
NDUFS3-204ENST00000525378 WRNQ14191 1432 aaPredicted RBP eCLIP21.04■□□□□ 0.96
NDUFS3-204ENST00000525378 ADAMTS12P58397 1594 aa20.98■□□□□ 0.95
NDUFS3-204ENST00000525378 GRIN2AQ12879 1464 aa20.97■□□□□ 0.95
NDUFS3-204ENST00000525378 CEP170Q5SW79 1584 aa20.93■□□□□ 0.94
NDUFS3-204ENST00000525378 ERCC6L2Q5T890 1561 aa20.92■□□□□ 0.94
NDUFS3-204ENST00000525378 NUP160Q12769 1436 aa20.9■□□□□ 0.94
NDUFS3-204ENST00000525378 ERICH3Q5RHP9 1530 aa20.88■□□□□ 0.93
NDUFS3-204ENST00000525378 FHAD1B1AJZ9 1412 aa20.88■□□□□ 0.93
NDUFS3-204ENST00000525378 SHROOM2Q13796 1616 aa20.84■□□□□ 0.93
NDUFS3-204ENST00000525378 PRG4Q92954 1404 aaPredicted RBP20.7■□□□□ 0.9
NDUFS3-204ENST00000525378 RUSC2Q8N2Y8 1516 aa20.69■□□□□ 0.9
NDUFS3-204ENST00000525378 JPH4Q96JJ6 628 aa20.68■□□□□ 0.9
NDUFS3-204ENST00000525378 IGF1RP08069 1367 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms