RNA–Protein interactions for RNA: ENST00000465051.1

CEACAM1-209, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 2

Gene CEACAM1, Length 321 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-209ENST00000465051 AEBP2Q6ZN18 517 aaPredicted RBP27.38■■□□□ 1.97
CEACAM1-209ENST00000465051 CHIC1Q5VXU3 224 aa25.96■■□□□ 1.75
CEACAM1-209ENST00000465051 SENP3Q9H4L4 574 aaPredicted RBP23.42■■□□□ 1.34
CEACAM1-209ENST00000465051 PHF23Q9BUL5 403 aaPredicted RBP23.09■■□□□ 1.29
CEACAM1-209ENST00000465051 FOXD1Q16676 465 aa21.8■■□□□ 1.08
CEACAM1-209ENST00000465051 PLPPR3Q6T4P5 718 aa20.76■□□□□ 0.91
CEACAM1-209ENST00000465051 MSH5O43196 834 aa20.45■□□□□ 0.86
CEACAM1-209ENST00000465051 PIAS4Q8N2W9 510 aaPredicted RBP20.43■□□□□ 0.86
CEACAM1-209ENST00000465051 PPP6R1Q9UPN7 881 aa20.34■□□□□ 0.85
CEACAM1-209ENST00000465051 ADRA2BP18089 450 aa20.32■□□□□ 0.84
CEACAM1-209ENST00000465051 POTEDQ86YR6 584 aa20.02■□□□□ 0.8
CEACAM1-209ENST00000465051 MAPK8IP2Q13387 824 aaPredicted RBP18.66■□□□□ 0.58
CEACAM1-209ENST00000465051 SCAF1Q9H7N4 1312 aaKnown RBP18.62■□□□□ 0.57
CEACAM1-209ENST00000465051 DMRT2Q9Y5R5 561 aa18.54■□□□□ 0.56
CEACAM1-209ENST00000465051 PPP4R3CPQ6ZMV5 832 aa18.19■□□□□ 0.5
CEACAM1-209ENST00000465051 DCAF8L1A6NGE4 600 aa17.92■□□□□ 0.46
CEACAM1-209ENST00000465051 CNKSR2Q8WXI2 1034 aa17.85■□□□□ 0.45
CEACAM1-209ENST00000465051 HOXD11P31277 338 aaPredicted RBP17.8■□□□□ 0.44
CEACAM1-209ENST00000465051 RNF216Q9NWF9 866 aaPredicted RBP17.69■□□□□ 0.42
CEACAM1-209ENST00000465051 CACNB1Q02641 598 aaPredicted RBP17.63■□□□□ 0.41
CEACAM1-209ENST00000465051 NCBP3Q53F19 620 aaKnown RBP17.52■□□□□ 0.4
CEACAM1-209ENST00000465051 RNF39Q9H2S5 420 aa17.42■□□□□ 0.38
CEACAM1-209ENST00000465051 NPM3O75607 178 aaKnown RBP17.22■□□□□ 0.35
CEACAM1-209ENST00000465051 C1QBPQ07021 282 aaKnown RBP17.18■□□□□ 0.34
CEACAM1-209ENST00000465051 DNAJC5BQ9UF47 199 aa17.15■□□□□ 0.34
CEACAM1-209ENST00000465051 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.08■□□□□ 0.32
CEACAM1-209ENST00000465051 KCNA4P22459 653 aa16.86■□□□□ 0.29
CEACAM1-209ENST00000465051 U3KPZ7 1027 aaPredicted RBP16.64■□□□□ 0.25
CEACAM1-209ENST00000465051 CAPN15O75808 1086 aa16.48■□□□□ 0.23
CEACAM1-209ENST00000465051 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
CEACAM1-209ENST00000465051 SLC4A2P04920 1241 aa16.43■□□□□ 0.22
CEACAM1-209ENST00000465051 DSG3P32926 999 aa16.3■□□□□ 0.2
CEACAM1-209ENST00000465051 APLP2Q06481 763 aa16.23■□□□□ 0.19
CEACAM1-209ENST00000465051 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.2■□□□□ 0.18
CEACAM1-209ENST00000465051 TRHP20396 242 aaPredicted RBP16.2■□□□□ 0.18
CEACAM1-209ENST00000465051 HNRNPUL2Q1KMD3 747 aaKnown RBP16.2■□□□□ 0.18
CEACAM1-209ENST00000465051 ZNF219Q9P2Y4 722 aaPredicted RBP16.12■□□□□ 0.17
CEACAM1-209ENST00000465051 SAMD1Q6SPF0 538 aaPredicted RBP16.09■□□□□ 0.17
CEACAM1-209ENST00000465051 ABCB7O75027 752 aa16.08■□□□□ 0.16
CEACAM1-209ENST00000465051 MYCNP04198 464 aaPredicted RBP15.94■□□□□ 0.14
CEACAM1-209ENST00000465051 SLC4A1APQ9BWU0 796 aaKnown RBP15.94■□□□□ 0.14
CEACAM1-209ENST00000465051 FOXD4L1Q9NU39 408 aa15.75■□□□□ 0.11
CEACAM1-209ENST00000465051 POLA2Q14181 598 aa15.72■□□□□ 0.11
CEACAM1-209ENST00000465051 POTEHQ6S545 545 aa15.7■□□□□ 0.1
CEACAM1-209ENST00000465051 RBM42Q9BTD8 480 aaKnown RBP15.6■□□□□ 0.09
CEACAM1-209ENST00000465051 ATF5Q9Y2D1 282 aaPredicted RBP15.55■□□□□ 0.08
CEACAM1-209ENST00000465051 ZBTB22O15209 634 aa15.47■□□□□ 0.07
CEACAM1-209ENST00000465051 ZBTB12Q9Y330 459 aaPredicted RBP15.4■□□□□ 0.06
CEACAM1-209ENST00000465051 CHRDL2Q6WN34 429 aa15.27■□□□□ 0.04
CEACAM1-209ENST00000465051 ATXN8OSP0DMR3 200 aa15.24■□□□□ 0.03
CEACAM1-209ENST00000465051 OSCARQ8IYS5 282 aa15.22■□□□□ 0.03
CEACAM1-209ENST00000465051 AKT1S1Q96B36 256 aa15.21■□□□□ 0.03
CEACAM1-209ENST00000465051 REM2Q8IYK8 340 aaPredicted RBP15.07■□□□□ 0
CEACAM1-209ENST00000465051 FBLN2P98095 1184 aa15.04■□□□□ -0
CEACAM1-209ENST00000465051 PITPNM1O00562 1244 aa14.92□□□□□ -0.02
CEACAM1-209ENST00000465051 SPDYE2BA6NHP3 402 aa14.89□□□□□ -0.03
CEACAM1-209ENST00000465051 SPDYE6P0CI01 402 aa14.89□□□□□ -0.03
CEACAM1-209ENST00000465051 SPDYE2Q495Y8 402 aa14.89□□□□□ -0.03
CEACAM1-209ENST00000465051 PIP4P2Q8N4L2 257 aa14.88□□□□□ -0.03
CEACAM1-209ENST00000465051 MKRN4PQ13434 485 aaPredicted RBP14.82□□□□□ -0.04
CEACAM1-209ENST00000465051 FXR2P51116 673 aaKnown RBP eCLIP14.75□□□□□ -0.05
CEACAM1-209ENST00000465051 ZNF692Q9BU19 519 aaPredicted RBP14.75□□□□□ -0.05
CEACAM1-209ENST00000465051 CSRNP3Q8WYN3 585 aa14.72□□□□□ -0.05
CEACAM1-209ENST00000465051 SP7Q8TDD2 431 aaPredicted RBP14.7□□□□□ -0.06
CEACAM1-209ENST00000465051 CLEC11AQ9Y240 323 aa14.7□□□□□ -0.06
CEACAM1-209ENST00000465051 HAX1O00165 279 aa14.69□□□□□ -0.06
CEACAM1-209ENST00000465051 SPDYE1Q8NFV5 336 aaPredicted RBP14.67□□□□□ -0.06
CEACAM1-209ENST00000465051 SSUH2Q9Y2M2 353 aa14.65□□□□□ -0.06
CEACAM1-209ENST00000465051 EHMT2Q96KQ7 1210 aa14.61□□□□□ -0.07
CEACAM1-209ENST00000465051 PRKAR2AP13861 404 aaKnown RBP14.56□□□□□ -0.08
CEACAM1-209ENST00000465051 PABPN1Q86U42 306 aaKnown RBP eCLIP14.52□□□□□ -0.09
CEACAM1-209ENST00000465051 PRR29P0C7W0 189 aa14.42□□□□□ -0.1
CEACAM1-209ENST00000465051 EVX2Q03828 476 aa14.42□□□□□ -0.1
CEACAM1-209ENST00000465051 CHADLQ6NUI6 762 aa14.38□□□□□ -0.11
CEACAM1-209ENST00000465051 C19orf67A6NJJ6 358 aa14.29□□□□□ -0.12
CEACAM1-209ENST00000465051 SPDYE4A6NLX3 237 aa14.16□□□□□ -0.14
CEACAM1-209ENST00000465051 FARP1Q9Y4F1 1045 aaPredicted RBP14.15□□□□□ -0.14
CEACAM1-209ENST00000465051 GABBR2O75899 941 aa14.12□□□□□ -0.15
CEACAM1-209ENST00000465051 STAG3Q9UJ98 1225 aa14.1□□□□□ -0.15
CEACAM1-209ENST00000465051 CD44P16070 742 aaKnown RBP14.09□□□□□ -0.15
CEACAM1-209ENST00000465051 CREBZFQ9NS37 354 aa13.99□□□□□ -0.17
CEACAM1-209ENST00000465051 ZRANB1Q9UGI0 708 aa13.9□□□□□ -0.18
CEACAM1-209ENST00000465051 CLCN6P51797 869 aa13.86□□□□□ -0.19
CEACAM1-209ENST00000465051 ZNF579Q8NAF0 562 aaKnown RBP13.82□□□□□ -0.2
CEACAM1-209ENST00000465051 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
CEACAM1-209ENST00000465051 LHX8Q68G74 356 aa13.81□□□□□ -0.2
CEACAM1-209ENST00000465051 DCBLD2Q96PD2 775 aa13.8□□□□□ -0.2
CEACAM1-209ENST00000465051 NPM1P06748 294 aaKnown RBP eCLIP13.79□□□□□ -0.2
CEACAM1-209ENST00000465051 POTEIP0CG38 1075 aa13.78□□□□□ -0.2
CEACAM1-209ENST00000465051 MNX1P50219 401 aaPredicted RBP13.7□□□□□ -0.22
CEACAM1-209ENST00000465051 PROM2Q8N271 834 aa13.7□□□□□ -0.22
CEACAM1-209ENST00000465051 GALR2O43603 387 aaPredicted RBP13.69□□□□□ -0.22
CEACAM1-209ENST00000465051 PHF12Q96QT6 1004 aa13.69□□□□□ -0.22
CEACAM1-209ENST00000465051 PLEKHG5O94827 1062 aa13.58□□□□□ -0.24
CEACAM1-209ENST00000465051 TSPYL2Q9H2G4 693 aaPredicted RBP13.57□□□□□ -0.24
CEACAM1-209ENST00000465051 MIER1Q8N108 512 aa13.56□□□□□ -0.24
CEACAM1-209ENST00000465051 MS4A3Q96HJ5 214 aa13.48□□□□□ -0.25
CEACAM1-209ENST00000465051 PLCD3Q8N3E9 789 aa13.46□□□□□ -0.25
CEACAM1-209ENST00000465051 FKBP8Q14318 412 aa13.43□□□□□ -0.26
CEACAM1-209ENST00000465051 CCDC61Q9Y6R9 512 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms