RNA–Protein interactions for RNA: ENST00000531051.6

PSMC3-210, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 5

Gene PSMC3, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-210ENST00000531051 NISCHQ9Y2I1 1504 aa30.79■■■□□ 2.52
PSMC3-210ENST00000531051 CCDC180Q9P1Z9 1646 aa27.34■■□□□ 1.97
PSMC3-210ENST00000531051 ABCC9O60706 1549 aa26.85■■□□□ 1.89
PSMC3-210ENST00000531051 DCAF8L2P0C7V8 631 aa25.86■■□□□ 1.73
PSMC3-210ENST00000531051 RB1CC1Q8TDY2 1594 aa25.72■■□□□ 1.71
PSMC3-210ENST00000531051 NACADO15069 1562 aa25.66■■□□□ 1.7
PSMC3-210ENST00000531051 ZCCHC6Q5VYS8 1495 aaKnown RBP25.65■■□□□ 1.7
PSMC3-210ENST00000531051 MYO15BQ96JP2 1530 aa25.42■■□□□ 1.66
PSMC3-210ENST00000531051 DCAF1Q9Y4B6 1507 aa25.37■■□□□ 1.65
PSMC3-210ENST00000531051 UNC13AQ9UPW8 1703 aa25.28■■□□□ 1.64
PSMC3-210ENST00000531051 PABPN1Q86U42 306 aaKnown RBP eCLIP25.12■■□□□ 1.61
PSMC3-210ENST00000531051 SCRIBQ14160 1630 aa25.09■■□□□ 1.61
PSMC3-210ENST00000531051 BICRAQ9NZM4 1560 aa25■■□□□ 1.59
PSMC3-210ENST00000531051 DNAJC5BQ9UF47 199 aa24.61■■□□□ 1.53
PSMC3-210ENST00000531051 SHROOM4Q9ULL8 1493 aa24.55■■□□□ 1.52
PSMC3-210ENST00000531051 EIF4G1Q04637 1599 aaKnown RBP24.32■■□□□ 1.48
PSMC3-210ENST00000531051 CC2D2AQ9P2K1 1620 aa24.24■■□□□ 1.47
PSMC3-210ENST00000531051 CECR2Q9BXF3 1484 aa24.07■■□□□ 1.44
PSMC3-210ENST00000531051 SMARCA4P51532 1647 aa23.92■■□□□ 1.42
PSMC3-210ENST00000531051 BAZ1AQ9NRL2 1556 aaPredicted RBP23.85■■□□□ 1.41
PSMC3-210ENST00000531051 MROH2BQ7Z745 1585 aa23.79■■□□□ 1.4
PSMC3-210ENST00000531051 ATAD2BQ9ULI0 1458 aa23.75■■□□□ 1.39
PSMC3-210ENST00000531051 SMARCA2P51531 1590 aa23.69■■□□□ 1.38
PSMC3-210ENST00000531051 NCAPD3P42695 1498 aa23.67■■□□□ 1.38
PSMC3-210ENST00000531051 PEG3Q9GZU2 1588 aa23.59■■□□□ 1.37
PSMC3-210ENST00000531051 WIZO95785 1651 aa23.58■■□□□ 1.37
PSMC3-210ENST00000531051 BAZ1BQ9UIG0 1483 aaKnown RBP23.58■■□□□ 1.37
PSMC3-210ENST00000531051 HMGXB3Q12766 1538 aa23.58■■□□□ 1.36
PSMC3-210ENST00000531051 RSF1Q96T23 1441 aaPredicted RBP23.5■■□□□ 1.35
PSMC3-210ENST00000531051 NESP48681 1621 aa23.26■■□□□ 1.31
PSMC3-210ENST00000531051 TOP2AP11388 1531 aaKnown RBP23.24■■□□□ 1.31
PSMC3-210ENST00000531051 ERCC6Q03468 1493 aa23.1■■□□□ 1.29
PSMC3-210ENST00000531051 LAMC3Q9Y6N6 1575 aa23.07■■□□□ 1.28
PSMC3-210ENST00000531051 SUPT5HO00267 1087 aaKnown RBP23.05■■□□□ 1.28
PSMC3-210ENST00000531051 CADPSQ9ULU8 1353 aa23.01■■□□□ 1.27
PSMC3-210ENST00000531051 CCDC88BA6NC98 1476 aa22.99■■□□□ 1.27
PSMC3-210ENST00000531051 KIF21AQ7Z4S6 1674 aa22.99■■□□□ 1.27
PSMC3-210ENST00000531051 PDS5BQ9NTI5 1447 aa22.91■■□□□ 1.26
PSMC3-210ENST00000531051 CFTRP13569 1480 aa22.88■■□□□ 1.25
PSMC3-210ENST00000531051 THOC2Q8NI27 1593 aaKnown RBP22.84■■□□□ 1.25
PSMC3-210ENST00000531051 FANCD2Q9BXW9 1451 aa22.79■■□□□ 1.24
PSMC3-210ENST00000531051 PRDM2Q13029 1718 aa22.79■■□□□ 1.24
PSMC3-210ENST00000531051 CEP164Q9UPV0 1460 aa22.76■■□□□ 1.23
PSMC3-210ENST00000531051 CUX2O14529 1486 aa22.73■■□□□ 1.23
PSMC3-210ENST00000531051 MRC2Q9UBG0 1479 aa22.72■■□□□ 1.23
PSMC3-210ENST00000531051 WDR62O43379 1518 aa22.62■■□□□ 1.21
PSMC3-210ENST00000531051 URB2Q14146 1524 aaKnown RBP22.6■■□□□ 1.21
PSMC3-210ENST00000531051 TOPBP1Q92547 1522 aa22.44■■□□□ 1.18
PSMC3-210ENST00000531051 DNMBPQ6XZF7 1577 aa22.41■■□□□ 1.18
PSMC3-210ENST00000531051 ABCC8Q09428 1581 aa22.33■■□□□ 1.16
PSMC3-210ENST00000531051 CUX1P39880 1505 aa22.32■■□□□ 1.16
PSMC3-210ENST00000531051 POLA1P09884 1462 aaPredicted RBP22.25■■□□□ 1.15
PSMC3-210ENST00000531051 IFT140Q96RY7 1462 aa22.24■■□□□ 1.15
PSMC3-210ENST00000531051 ZNF608Q9ULD9 1512 aaPredicted RBP22.24■■□□□ 1.15
PSMC3-210ENST00000531051 FGD5Q6ZNL6 1462 aa22.23■■□□□ 1.15
PSMC3-210ENST00000531051 RAD54L2Q9Y4B4 1467 aa22.22■■□□□ 1.15
PSMC3-210ENST00000531051 TARBP1Q13395 1621 aaKnown RBP22.2■■□□□ 1.14
PSMC3-210ENST00000531051 SYNJ1O43426 1573 aa22.16■■□□□ 1.14
PSMC3-210ENST00000531051 SOGA1O94964 1423 aa22.15■■□□□ 1.14
PSMC3-210ENST00000531051 WRNQ14191 1432 aaPredicted RBP eCLIP22.14■■□□□ 1.14
PSMC3-210ENST00000531051 EIF4G3O43432 1585 aaKnown RBP22.14■■□□□ 1.13
PSMC3-210ENST00000531051 AQRO60306 1485 aaKnown RBP eCLIP22.1■■□□□ 1.131e-6■■■■□ 20.8
PSMC3-210ENST00000531051 BIVM-ERCC5R4GMW8 1640 aa22.1■■□□□ 1.13
PSMC3-210ENST00000531051 TOP2BQ02880 1626 aa22.09■■□□□ 1.13
PSMC3-210ENST00000531051 TDRD9Q8NDG6 1382 aaKnown RBP22.08■■□□□ 1.12
PSMC3-210ENST00000531051 WDR97A6NE52 1622 aa22.05■■□□□ 1.12
PSMC3-210ENST00000531051 DNAJC5Q9H3Z4 198 aa22.03■■□□□ 1.12
PSMC3-210ENST00000531051 ABCA10Q8WWZ4 1543 aa21.95■■□□□ 1.1
PSMC3-210ENST00000531051 PBRM1Q86U86 1689 aa21.92■■□□□ 1.1
PSMC3-210ENST00000531051 CHD1O14646 1710 aa21.91■■□□□ 1.1
PSMC3-210ENST00000531051 GAPVD1Q14C86 1478 aa21.9■■□□□ 1.1
PSMC3-210ENST00000531051 ABCA5Q8WWZ7 1642 aa21.9■■□□□ 1.1
PSMC3-210ENST00000531051 SNAPC4Q5SXM2 1469 aa21.9■■□□□ 1.1
PSMC3-210ENST00000531051 FBLN2P98095 1184 aa21.87■■□□□ 1.09
PSMC3-210ENST00000531051 GRIN2BQ13224 1484 aa21.87■■□□□ 1.09
PSMC3-210ENST00000531051 OSCARQ8IYS5 282 aa21.84■■□□□ 1.09
PSMC3-210ENST00000531051 MAGI1Q96QZ7 1491 aaPredicted RBP21.78■■□□□ 1.08
PSMC3-210ENST00000531051 CHMP7Q8WUX9 453 aaPredicted RBP21.75■■□□□ 1.07
PSMC3-210ENST00000531051 SYNJ2O15056 1496 aa21.72■■□□□ 1.07
PSMC3-210ENST00000531051 ADAMTS12P58397 1594 aa21.71■■□□□ 1.07
PSMC3-210ENST00000531051 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
PSMC3-210ENST00000531051 ERICH3Q5RHP9 1530 aa21.67■■□□□ 1.06
PSMC3-210ENST00000531051 KIF27Q86VH2 1401 aa21.65■■□□□ 1.06
PSMC3-210ENST00000531051 FHAD1B1AJZ9 1412 aa21.62■■□□□ 1.05
PSMC3-210ENST00000531051 GRIN2AQ12879 1464 aa21.6■■□□□ 1.05
PSMC3-210ENST00000531051 RUSC2Q8N2Y8 1516 aa21.6■■□□□ 1.05
PSMC3-210ENST00000531051 CLASP1Q7Z460 1538 aa21.57■■□□□ 1.04
PSMC3-210ENST00000531051 RIMBP3CA6NJZ7 1639 aa21.57■■□□□ 1.04
PSMC3-210ENST00000531051 RIMBP3BA6NNM3 1639 aa21.57■■□□□ 1.04
PSMC3-210ENST00000531051 RIMBP3Q9UFD9 1639 aa21.57■■□□□ 1.04
PSMC3-210ENST00000531051 IGF1RP08069 1367 aa21.57■■□□□ 1.04
PSMC3-210ENST00000531051 CEP170Q5SW79 1584 aa21.55■■□□□ 1.04
PSMC3-210ENST00000531051 ARHGEF11O15085 1522 aa21.53■■□□□ 1.04
PSMC3-210ENST00000531051 CUL7Q14999 1698 aa21.52■■□□□ 1.04
PSMC3-210ENST00000531051 NUP160Q12769 1436 aa21.47■■□□□ 1.03
PSMC3-210ENST00000531051 CHIC1Q5VXU3 224 aa21.46■■□□□ 1.03
PSMC3-210ENST00000531051 CARMIL1Q5VZK9 1371 aa21.46■■□□□ 1.03
PSMC3-210ENST00000531051 ERCC6L2Q5T890 1561 aa21.38■■□□□ 1.01
PSMC3-210ENST00000531051 ARAP1Q96P48 1450 aa21.38■■□□□ 1.01
PSMC3-210ENST00000531051 FAM9AQ8IZU1 332 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms