RNA–Protein interactions for RNA: ENST00000524447.6

PSMC3-202, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 3

Gene PSMC3, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-202ENST00000524447 NISCHQ9Y2I1 1504 aa35.98■■■■□ 3.35
PSMC3-202ENST00000524447 CCDC180Q9P1Z9 1646 aa31.78■■■□□ 2.68
PSMC3-202ENST00000524447 ABCC9O60706 1549 aa31.31■■■□□ 2.6
PSMC3-202ENST00000524447 DCAF8L2P0C7V8 631 aa30.2■■■□□ 2.43
PSMC3-202ENST00000524447 ZCCHC6Q5VYS8 1495 aaKnown RBP30.01■■■□□ 2.4
PSMC3-202ENST00000524447 NACADO15069 1562 aa29.89■■■□□ 2.38
PSMC3-202ENST00000524447 RB1CC1Q8TDY2 1594 aa29.88■■■□□ 2.37
PSMC3-202ENST00000524447 MYO15BQ96JP2 1530 aa29.74■■■□□ 2.35
PSMC3-202ENST00000524447 DCAF1Q9Y4B6 1507 aa29.72■■■□□ 2.35
PSMC3-202ENST00000524447 DNAJC5BQ9UF47 199 aa29.26■■■□□ 2.27
PSMC3-202ENST00000524447 PABPN1Q86U42 306 aaKnown RBP eCLIP29.2■■■□□ 2.26
PSMC3-202ENST00000524447 SCRIBQ14160 1630 aa29.16■■■□□ 2.26
PSMC3-202ENST00000524447 UNC13AQ9UPW8 1703 aa29.04■■■□□ 2.24
PSMC3-202ENST00000524447 BICRAQ9NZM4 1560 aa28.91■■■□□ 2.22
PSMC3-202ENST00000524447 SHROOM4Q9ULL8 1493 aa28.76■■■□□ 2.19
PSMC3-202ENST00000524447 CC2D2AQ9P2K1 1620 aa28.25■■■□□ 2.11
PSMC3-202ENST00000524447 EIF4G1Q04637 1599 aaKnown RBP28.24■■■□□ 2.11
PSMC3-202ENST00000524447 CECR2Q9BXF3 1484 aa28.23■■■□□ 2.11
PSMC3-202ENST00000524447 BAZ1AQ9NRL2 1556 aaPredicted RBP27.88■■■□□ 2.05
PSMC3-202ENST00000524447 SMARCA4P51532 1647 aa27.84■■■□□ 2.05
PSMC3-202ENST00000524447 MROH2BQ7Z745 1585 aa27.75■■■□□ 2.03
PSMC3-202ENST00000524447 ATAD2BQ9ULI0 1458 aa27.67■■■□□ 2.02
PSMC3-202ENST00000524447 SMARCA2P51531 1590 aa27.65■■■□□ 2.02
PSMC3-202ENST00000524447 NCAPD3P42695 1498 aa27.59■■■□□ 2.01
PSMC3-202ENST00000524447 RSF1Q96T23 1441 aaPredicted RBP27.55■■■□□ 2
PSMC3-202ENST00000524447 PEG3Q9GZU2 1588 aa27.51■■□□□ 1.99
PSMC3-202ENST00000524447 BAZ1BQ9UIG0 1483 aaKnown RBP27.5■■□□□ 1.99
PSMC3-202ENST00000524447 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
PSMC3-202ENST00000524447 WIZO95785 1651 aa27.43■■□□□ 1.98
PSMC3-202ENST00000524447 SUPT5HO00267 1087 aaKnown RBP27.21■■□□□ 1.95
PSMC3-202ENST00000524447 TOP2AP11388 1531 aaKnown RBP27.18■■□□□ 1.94
PSMC3-202ENST00000524447 ERCC6Q03468 1493 aa27.09■■□□□ 1.93
PSMC3-202ENST00000524447 CUX2O14529 1486 aa27■■□□□ 1.91
PSMC3-202ENST00000524447 CCDC88BA6NC98 1476 aa26.89■■□□□ 1.9
PSMC3-202ENST00000524447 DNAJC5Q9H3Z4 198 aa26.89■■□□□ 1.9
PSMC3-202ENST00000524447 NESP48681 1621 aa26.89■■□□□ 1.9
PSMC3-202ENST00000524447 CADPSQ9ULU8 1353 aa26.85■■□□□ 1.89
PSMC3-202ENST00000524447 LAMC3Q9Y6N6 1575 aa26.8■■□□□ 1.88
PSMC3-202ENST00000524447 CFTRP13569 1480 aa26.71■■□□□ 1.87
PSMC3-202ENST00000524447 PDS5BQ9NTI5 1447 aa26.71■■□□□ 1.87
PSMC3-202ENST00000524447 THOC2Q8NI27 1593 aaKnown RBP26.57■■□□□ 1.84
PSMC3-202ENST00000524447 FANCD2Q9BXW9 1451 aa26.55■■□□□ 1.84
PSMC3-202ENST00000524447 CEP164Q9UPV0 1460 aa26.5■■□□□ 1.83
PSMC3-202ENST00000524447 KIF21AQ7Z4S6 1674 aa26.48■■□□□ 1.83
PSMC3-202ENST00000524447 MRC2Q9UBG0 1479 aa26.41■■□□□ 1.82
PSMC3-202ENST00000524447 PRDM2Q13029 1718 aa26.37■■□□□ 1.81
PSMC3-202ENST00000524447 WDR62O43379 1518 aa26.3■■□□□ 1.8
PSMC3-202ENST00000524447 URB2Q14146 1524 aaKnown RBP26.24■■□□□ 1.79
PSMC3-202ENST00000524447 ABCC8Q09428 1581 aa26.14■■□□□ 1.78
PSMC3-202ENST00000524447 TOPBP1Q92547 1522 aa26.13■■□□□ 1.77
PSMC3-202ENST00000524447 DNMBPQ6XZF7 1577 aa26.1■■□□□ 1.77
PSMC3-202ENST00000524447 CUX1P39880 1505 aa26.02■■□□□ 1.76
PSMC3-202ENST00000524447 WRNQ14191 1432 aaPredicted RBP eCLIP26■■□□□ 1.75
PSMC3-202ENST00000524447 POLA1P09884 1462 aaPredicted RBP25.93■■□□□ 1.74
PSMC3-202ENST00000524447 IFT140Q96RY7 1462 aa25.92■■□□□ 1.74
PSMC3-202ENST00000524447 FGD5Q6ZNL6 1462 aa25.91■■□□□ 1.74
PSMC3-202ENST00000524447 SOGA1O94964 1423 aa25.88■■□□□ 1.73
PSMC3-202ENST00000524447 SYNJ1O43426 1573 aa25.86■■□□□ 1.73
PSMC3-202ENST00000524447 OSCARQ8IYS5 282 aa25.85■■□□□ 1.73
PSMC3-202ENST00000524447 RAD54L2Q9Y4B4 1467 aa25.85■■□□□ 1.73
PSMC3-202ENST00000524447 TOP2BQ02880 1626 aa25.83■■□□□ 1.73
PSMC3-202ENST00000524447 BIVM-ERCC5R4GMW8 1640 aa25.78■■□□□ 1.72
PSMC3-202ENST00000524447 ZNF608Q9ULD9 1512 aaPredicted RBP25.78■■□□□ 1.72
PSMC3-202ENST00000524447 TARBP1Q13395 1621 aaKnown RBP25.75■■□□□ 1.71
PSMC3-202ENST00000524447 TRIM41Q8WV44 630 aa25.73■■□□□ 1.71
PSMC3-202ENST00000524447 TDRD9Q8NDG6 1382 aaKnown RBP25.72■■□□□ 1.71
PSMC3-202ENST00000524447 AQRO60306 1485 aaKnown RBP eCLIP25.7■■□□□ 1.71e-6■■■■□ 20.8
PSMC3-202ENST00000524447 ABCA10Q8WWZ4 1543 aa25.65■■□□□ 1.7
PSMC3-202ENST00000524447 EIF4G3O43432 1585 aaKnown RBP25.65■■□□□ 1.7
PSMC3-202ENST00000524447 GAPVD1Q14C86 1478 aa25.56■■□□□ 1.68
PSMC3-202ENST00000524447 WDR97A6NE52 1622 aa25.55■■□□□ 1.68
PSMC3-202ENST00000524447 GRIN2BQ13224 1484 aa25.53■■□□□ 1.68
PSMC3-202ENST00000524447 ABCA5Q8WWZ7 1642 aa25.48■■□□□ 1.67
PSMC3-202ENST00000524447 FBLN2P98095 1184 aa25.47■■□□□ 1.67
PSMC3-202ENST00000524447 SNAPC4Q5SXM2 1469 aa25.47■■□□□ 1.67
PSMC3-202ENST00000524447 CHIC1Q5VXU3 224 aa25.46■■□□□ 1.67
PSMC3-202ENST00000524447 KIF27Q86VH2 1401 aa25.46■■□□□ 1.67
PSMC3-202ENST00000524447 MAGI1Q96QZ7 1491 aaPredicted RBP25.4■■□□□ 1.66
PSMC3-202ENST00000524447 CHMP7Q8WUX9 453 aaPredicted RBP25.39■■□□□ 1.66
PSMC3-202ENST00000524447 PBRM1Q86U86 1689 aa25.38■■□□□ 1.65
PSMC3-202ENST00000524447 ERICH3Q5RHP9 1530 aa25.33■■□□□ 1.65
PSMC3-202ENST00000524447 RIMBP3CA6NJZ7 1639 aa25.33■■□□□ 1.65
PSMC3-202ENST00000524447 RIMBP3BA6NNM3 1639 aa25.33■■□□□ 1.65
PSMC3-202ENST00000524447 RIMBP3Q9UFD9 1639 aa25.33■■□□□ 1.65
PSMC3-202ENST00000524447 ARHGEF11O15085 1522 aa25.32■■□□□ 1.64
PSMC3-202ENST00000524447 SYNJ2O15056 1496 aa25.31■■□□□ 1.64
PSMC3-202ENST00000524447 IGF1RP08069 1367 aa25.29■■□□□ 1.64
PSMC3-202ENST00000524447 FHAD1B1AJZ9 1412 aa25.28■■□□□ 1.64
PSMC3-202ENST00000524447 RUSC2Q8N2Y8 1516 aa25.26■■□□□ 1.63
PSMC3-202ENST00000524447 ADAMTS12P58397 1594 aa25.25■■□□□ 1.63
PSMC3-202ENST00000524447 CHD1O14646 1710 aa25.25■■□□□ 1.63
PSMC3-202ENST00000524447 CYB5RLQ6IPT4 315 aa25.2■■□□□ 1.62
PSMC3-202ENST00000524447 FAM9AQ8IZU1 332 aaPredicted RBP25.18■■□□□ 1.62
PSMC3-202ENST00000524447 CARMIL1Q5VZK9 1371 aa25.18■■□□□ 1.62
PSMC3-202ENST00000524447 GRIN2AQ12879 1464 aa25.17■■□□□ 1.62
PSMC3-202ENST00000524447 CUL7Q14999 1698 aa25.13■■□□□ 1.61
PSMC3-202ENST00000524447 EEA1Q15075 1411 aa25.12■■□□□ 1.61
PSMC3-202ENST00000524447 CSRNP3Q8WYN3 585 aa25.1■■□□□ 1.61
PSMC3-202ENST00000524447 ARAP1Q96P48 1450 aa25.06■■□□□ 1.6
PSMC3-202ENST00000524447 CLASP1Q7Z460 1538 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms