RNA–Protein interactions for RNA: ENST00000553660.5

CNIH1-203, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2 BASIC

Gene CNIH1, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-203ENST00000553660 AEBP2Q6ZN18 517 aaPredicted RBP33.24■■■□□ 2.91
CNIH1-203ENST00000553660 CHIC1Q5VXU3 224 aa32.46■■■□□ 2.79
CNIH1-203ENST00000553660 PHF23Q9BUL5 403 aaPredicted RBP28.53■■■□□ 2.16
CNIH1-203ENST00000553660 SENP3Q9H4L4 574 aaPredicted RBP28.24■■■□□ 2.11
CNIH1-203ENST00000553660 PLPPR3Q6T4P5 718 aa26.35■■□□□ 1.81
CNIH1-203ENST00000553660 FOXD1Q16676 465 aa26.19■■□□□ 1.78
CNIH1-203ENST00000553660 NISCHQ9Y2I1 1504 aa26.04■■□□□ 1.76
CNIH1-203ENST00000553660 PPP6R1Q9UPN7 881 aa25.17■■□□□ 1.62
CNIH1-203ENST00000553660 ADRA2BP18089 450 aa25.14■■□□□ 1.62
CNIH1-203ENST00000553660 PIAS4Q8N2W9 510 aaPredicted RBP24.7■■□□□ 1.54
CNIH1-203ENST00000553660 MSH5O43196 834 aa24.19■■□□□ 1.46
CNIH1-203ENST00000553660 PPP4R3CPQ6ZMV5 832 aa23.21■■□□□ 1.31
CNIH1-203ENST00000553660 CCDC180Q9P1Z9 1646 aa23.19■■□□□ 1.3
CNIH1-203ENST00000553660 SCAF1Q9H7N4 1312 aaKnown RBP23.04■■□□□ 1.28
CNIH1-203ENST00000553660 MAPK8IP2Q13387 824 aaPredicted RBP22.82■■□□□ 1.24
CNIH1-203ENST00000553660 ABCC9O60706 1549 aa22.67■■□□□ 1.22
CNIH1-203ENST00000553660 KCNA4P22459 653 aa22.62■■□□□ 1.21
CNIH1-203ENST00000553660 NCBP3Q53F19 620 aaKnown RBP22.6■■□□□ 1.21
CNIH1-203ENST00000553660 CNKSR2Q8WXI2 1034 aa22.58■■□□□ 1.21
CNIH1-203ENST00000553660 DMRT2Q9Y5R5 561 aa22.54■■□□□ 1.2
CNIH1-203ENST00000553660 NPM3O75607 178 aaKnown RBP22.26■■□□□ 1.15
CNIH1-203ENST00000553660 RNF216Q9NWF9 866 aaPredicted RBP22.14■■□□□ 1.13
CNIH1-203ENST00000553660 HOXD11P31277 338 aaPredicted RBP22.06■■□□□ 1.12
CNIH1-203ENST00000553660 POTEDQ86YR6 584 aa22.06■■□□□ 1.12
CNIH1-203ENST00000553660 NACADO15069 1562 aa21.87■■□□□ 1.09
CNIH1-203ENST00000553660 RB1CC1Q8TDY2 1594 aa21.87■■□□□ 1.09
CNIH1-203ENST00000553660 MYO15BQ96JP2 1530 aa21.8■■□□□ 1.08
CNIH1-203ENST00000553660 ZCCHC6Q5VYS8 1495 aaKnown RBP21.67■■□□□ 1.06
CNIH1-203ENST00000553660 DNAJC5BQ9UF47 199 aa21.65■■□□□ 1.06
CNIH1-203ENST00000553660 DCAF8L2P0C7V8 631 aa21.64■■□□□ 1.05
CNIH1-203ENST00000553660 DCAF1Q9Y4B6 1507 aa21.64■■□□□ 1.05
CNIH1-203ENST00000553660 SLC4A1APQ9BWU0 796 aaKnown RBP21.55■■□□□ 1.04
CNIH1-203ENST00000553660 DCAF8L1A6NGE4 600 aa21.53■■□□□ 1.04
CNIH1-203ENST00000553660 UNC13AQ9UPW8 1703 aa21.24■□□□□ 0.99
CNIH1-203ENST00000553660 BICRAQ9NZM4 1560 aa21.18■□□□□ 0.98
CNIH1-203ENST00000553660 PABPN1Q86U42 306 aaKnown RBP eCLIP21.16■□□□□ 0.98
CNIH1-203ENST00000553660 SHROOM4Q9ULL8 1493 aa21.12■□□□□ 0.97
CNIH1-203ENST00000553660 SLC4A2P04920 1241 aa21.02■□□□□ 0.96
CNIH1-203ENST00000553660 SCRIBQ14160 1630 aa21.02■□□□□ 0.96
CNIH1-203ENST00000553660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.01■□□□□ 0.95
CNIH1-203ENST00000553660 EHMT2Q96KQ7 1210 aa20.87■□□□□ 0.93
CNIH1-203ENST00000553660 FOXD4L1Q9NU39 408 aa20.86■□□□□ 0.93
CNIH1-203ENST00000553660 ZBTB22O15209 634 aa20.8■□□□□ 0.92
CNIH1-203ENST00000553660 RNF39Q9H2S5 420 aa20.7■□□□□ 0.9
CNIH1-203ENST00000553660 CSRNP3Q8WYN3 585 aa20.68■□□□□ 0.9
CNIH1-203ENST00000553660 U3KPZ7 1027 aaPredicted RBP20.68■□□□□ 0.9
CNIH1-203ENST00000553660 EIF4G1Q04637 1599 aaKnown RBP20.63■□□□□ 0.89
CNIH1-203ENST00000553660 MYCNP04198 464 aaPredicted RBP20.58■□□□□ 0.89
CNIH1-203ENST00000553660 CC2D2AQ9P2K1 1620 aa20.54■□□□□ 0.88
CNIH1-203ENST00000553660 C1QBPQ07021 282 aaKnown RBP20.48■□□□□ 0.87
CNIH1-203ENST00000553660 CECR2Q9BXF3 1484 aa20.45■□□□□ 0.86
CNIH1-203ENST00000553660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.42■□□□□ 0.86
CNIH1-203ENST00000553660 HNRNPUL2Q1KMD3 747 aaKnown RBP20.42■□□□□ 0.86
CNIH1-203ENST00000553660 SAMD1Q6SPF0 538 aaPredicted RBP20.34■□□□□ 0.85
CNIH1-203ENST00000553660 APLP2Q06481 763 aa20.22■□□□□ 0.83
CNIH1-203ENST00000553660 NCAPD3P42695 1498 aa20.2■□□□□ 0.82
CNIH1-203ENST00000553660 CACNB1Q02641 598 aaPredicted RBP20.19■□□□□ 0.82
CNIH1-203ENST00000553660 BAZ1AQ9NRL2 1556 aaPredicted RBP20.19■□□□□ 0.82
CNIH1-203ENST00000553660 SMARCA4P51532 1647 aa20.18■□□□□ 0.82
CNIH1-203ENST00000553660 ATAD2BQ9ULI0 1458 aa20.14■□□□□ 0.81
CNIH1-203ENST00000553660 ATXN8OSP0DMR3 200 aa20.13■□□□□ 0.81
CNIH1-203ENST00000553660 SMARCA2P51531 1590 aa20.12■□□□□ 0.81
CNIH1-203ENST00000553660 SPINK5Q9NQ38 1064 aaPredicted RBP20.08■□□□□ 0.81
CNIH1-203ENST00000553660 PEG3Q9GZU2 1588 aa20.08■□□□□ 0.8
CNIH1-203ENST00000553660 HMGXB3Q12766 1538 aa20.07■□□□□ 0.8
CNIH1-203ENST00000553660 CAPN15O75808 1086 aa20.02■□□□□ 0.8
CNIH1-203ENST00000553660 MROH2BQ7Z745 1585 aa20■□□□□ 0.79
CNIH1-203ENST00000553660 ATF5Q9Y2D1 282 aaPredicted RBP20■□□□□ 0.79
CNIH1-203ENST00000553660 BAZ1BQ9UIG0 1483 aaKnown RBP19.93■□□□□ 0.78
CNIH1-203ENST00000553660 ZNF219Q9P2Y4 722 aaPredicted RBP19.93■□□□□ 0.78
CNIH1-203ENST00000553660 TRHP20396 242 aaPredicted RBP19.92■□□□□ 0.78
CNIH1-203ENST00000553660 RSF1Q96T23 1441 aaPredicted RBP19.79■□□□□ 0.76
CNIH1-203ENST00000553660 WIZO95785 1651 aa19.73■□□□□ 0.75
CNIH1-203ENST00000553660 DSG3P32926 999 aa19.7■□□□□ 0.74
CNIH1-203ENST00000553660 LAMC3Q9Y6N6 1575 aa19.64■□□□□ 0.73
CNIH1-203ENST00000553660 ABCB7O75027 752 aa19.63■□□□□ 0.73
CNIH1-203ENST00000553660 TOP2AP11388 1531 aaKnown RBP19.61■□□□□ 0.73
CNIH1-203ENST00000553660 ERCC6Q03468 1493 aa19.59■□□□□ 0.73
CNIH1-203ENST00000553660 NESP48681 1621 aa19.58■□□□□ 0.73
CNIH1-203ENST00000553660 POLA2Q14181 598 aa19.58■□□□□ 0.72
CNIH1-203ENST00000553660 CADPSQ9ULU8 1353 aa19.57■□□□□ 0.72
CNIH1-203ENST00000553660 PDS5BQ9NTI5 1447 aa19.52■□□□□ 0.72
CNIH1-203ENST00000553660 CUX2O14529 1486 aa19.51■□□□□ 0.71
CNIH1-203ENST00000553660 CFTRP13569 1480 aa19.45■□□□□ 0.7
CNIH1-203ENST00000553660 THOC2Q8NI27 1593 aaKnown RBP19.36■□□□□ 0.69
CNIH1-203ENST00000553660 CCDC88BA6NC98 1476 aa19.35■□□□□ 0.69
CNIH1-203ENST00000553660 KIF21AQ7Z4S6 1674 aa19.33■□□□□ 0.68
CNIH1-203ENST00000553660 FANCD2Q9BXW9 1451 aa19.3■□□□□ 0.68
CNIH1-203ENST00000553660 CEP164Q9UPV0 1460 aa19.29■□□□□ 0.68
CNIH1-203ENST00000553660 MRC2Q9UBG0 1479 aa19.28■□□□□ 0.68
CNIH1-203ENST00000553660 ZBTB12Q9Y330 459 aaPredicted RBP19.28■□□□□ 0.68
CNIH1-203ENST00000553660 WDR62O43379 1518 aa19.25■□□□□ 0.67
CNIH1-203ENST00000553660 FBLN2P98095 1184 aa19.2■□□□□ 0.66
CNIH1-203ENST00000553660 PRDM2Q13029 1718 aa19.18■□□□□ 0.66
CNIH1-203ENST00000553660 MKRN4PQ13434 485 aaPredicted RBP19.14■□□□□ 0.65
CNIH1-203ENST00000553660 URB2Q14146 1524 aaKnown RBP19.09■□□□□ 0.65
CNIH1-203ENST00000553660 SUPT5HO00267 1087 aaKnown RBP19.08■□□□□ 0.64
CNIH1-203ENST00000553660 ABCC8Q09428 1581 aa19.06■□□□□ 0.64
CNIH1-203ENST00000553660 DNAJC5Q9H3Z4 198 aa19.01■□□□□ 0.63
CNIH1-203ENST00000553660 TOPBP1Q92547 1522 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms