RNA–Protein interactions for RNA: ENST00000332496.10

SEMA4B-201, Transcript of semaphorin 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4B, Length 3,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-201ENST00000332496 NISCHQ9Y2I1 1504 aa26.46■■□□□ 1.83
SEMA4B-201ENST00000332496 SHROOM4Q9ULL8 1493 aa24.05■■□□□ 1.44
SEMA4B-201ENST00000332496 SUPT5HO00267 1087 aaKnown RBP24.04■■□□□ 1.44
SEMA4B-201ENST00000332496 HRCP23327 699 aa23.73■■□□□ 1.39
SEMA4B-201ENST00000332496 PCGF6Q9BYE7 350 aa23.63■■□□□ 1.37
SEMA4B-201ENST00000332496 PPARGC1BQ86YN6 1023 aaKnown RBP23.43■■□□□ 1.34
SEMA4B-201ENST00000332496 CHIC1Q5VXU3 224 aa23.21■■□□□ 1.31
SEMA4B-201ENST00000332496 DCAF8L2P0C7V8 631 aa23.14■■□□□ 1.3
SEMA4B-201ENST00000332496 MYO15BQ96JP2 1530 aa23.04■■□□□ 1.28
SEMA4B-201ENST00000332496 LOC105371045A0A1W2PR82 267 aa22.88■■□□□ 1.25
SEMA4B-201ENST00000332496 PELP1Q8IZL8 1130 aaKnown RBP22.76■■□□□ 1.23
SEMA4B-201ENST00000332496 TRIM26Q12899 539 aaPredicted RBP22.69■■□□□ 1.22
SEMA4B-201ENST00000332496 ZEB1P37275 1124 aaPredicted RBP22.49■■□□□ 1.19
SEMA4B-201ENST00000332496 DCAF1Q9Y4B6 1507 aa22.48■■□□□ 1.19
SEMA4B-201ENST00000332496 EHMT2Q96KQ7 1210 aa22.45■■□□□ 1.18
SEMA4B-201ENST00000332496 ZCCHC6Q5VYS8 1495 aaKnown RBP22.39■■□□□ 1.18
SEMA4B-201ENST00000332496 SCAF1Q9H7N4 1312 aaKnown RBP22.38■■□□□ 1.17
SEMA4B-201ENST00000332496 FAM9AQ8IZU1 332 aaPredicted RBP22.34■■□□□ 1.17
SEMA4B-201ENST00000332496 TRIM41Q8WV44 630 aa22.14■■□□□ 1.13
SEMA4B-201ENST00000332496 CCDC180Q9P1Z9 1646 aa22.07■■□□□ 1.12
SEMA4B-201ENST00000332496 CCER1Q8TC90 406 aaPredicted RBP21.98■■□□□ 1.11
SEMA4B-201ENST00000332496 ACIN1Q9UKV3 1341 aaKnown RBP21.94■■□□□ 1.1
SEMA4B-201ENST00000332496 CENPBP07199 599 aaPredicted RBP21.93■■□□□ 1.1
SEMA4B-201ENST00000332496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.93■■□□□ 1.1
SEMA4B-201ENST00000332496 NEUROD1Q13562 356 aa21.91■■□□□ 1.1
SEMA4B-201ENST00000332496 GTF3C3Q9Y5Q9 886 aa21.91■■□□□ 1.1
SEMA4B-201ENST00000332496 TTBK1Q5TCY1 1321 aaPredicted RBP21.85■■□□□ 1.09
SEMA4B-201ENST00000332496 MYT1Q01538 1121 aa21.84■■□□□ 1.09
SEMA4B-201ENST00000332496 DIEXFQ68CQ4 756 aaKnown RBP21.78■■□□□ 1.08
SEMA4B-201ENST00000332496 YTHDC1Q96MU7 727 aaKnown RBP21.7■■□□□ 1.06
SEMA4B-201ENST00000332496 RSF1Q96T23 1441 aaPredicted RBP21.39■■□□□ 1.01
SEMA4B-201ENST00000332496 ZNF316A6NFI3 1004 aaPredicted RBP21.32■■□□□ 1
SEMA4B-201ENST00000332496 ABCC9O60706 1549 aa21.2■□□□□ 0.98
SEMA4B-201ENST00000332496 RB1CC1Q8TDY2 1594 aa21.2■□□□□ 0.98
SEMA4B-201ENST00000332496 MIER1Q8N108 512 aa21.17■□□□□ 0.98
SEMA4B-201ENST00000332496 UBTFP17480 764 aaKnown RBP21.17■□□□□ 0.98
SEMA4B-201ENST00000332496 HNRNPUL2Q1KMD3 747 aaKnown RBP21.15■□□□□ 0.98
SEMA4B-201ENST00000332496 SCRIBQ14160 1630 aa21.15■□□□□ 0.98
SEMA4B-201ENST00000332496 RANGAP1P46060 587 aaPredicted RBP20.94■□□□□ 0.94
SEMA4B-201ENST00000332496 APLP2Q06481 763 aa20.92■□□□□ 0.94
SEMA4B-201ENST00000332496 CEP162Q5TB80 1403 aa20.87■□□□□ 0.93
SEMA4B-201ENST00000332496 CECR2Q9BXF3 1484 aa20.86■□□□□ 0.93
SEMA4B-201ENST00000332496 CSRNP3Q8WYN3 585 aa20.79■□□□□ 0.92
SEMA4B-201ENST00000332496 MROH2BQ7Z745 1585 aa20.74■□□□□ 0.91
SEMA4B-201ENST00000332496 SUPT16HQ9Y5B9 1047 aaKnown RBP20.73■□□□□ 0.91
SEMA4B-201ENST00000332496 WRNQ14191 1432 aaPredicted RBP eCLIP20.7■□□□□ 0.9
SEMA4B-201ENST00000332496 BCANQ96GW7 911 aa20.7■□□□□ 0.9
SEMA4B-201ENST00000332496 TNIKQ9UKE5 1360 aa20.67■□□□□ 0.9
SEMA4B-201ENST00000332496 SOGA1O94964 1423 aa20.66■□□□□ 0.9
SEMA4B-201ENST00000332496 CCDC88BA6NC98 1476 aa20.65■□□□□ 0.9
SEMA4B-201ENST00000332496 WIZO95785 1651 aa20.62■□□□□ 0.89
SEMA4B-201ENST00000332496 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
SEMA4B-201ENST00000332496 ANP32EQ9BTT0 268 aa20.61■□□□□ 0.89
SEMA4B-201ENST00000332496 PABPN1Q86U42 306 aaKnown RBP eCLIP20.61■□□□□ 0.89
SEMA4B-201ENST00000332496 CLSPNQ9HAW4 1339 aa20.58■□□□□ 0.88
SEMA4B-201ENST00000332496 TSHZ2Q9NRE2 1034 aa20.58■□□□□ 0.88
SEMA4B-201ENST00000332496 ITGAEP38570 1179 aa20.5■□□□□ 0.87
SEMA4B-201ENST00000332496 BCL11AQ9H165 835 aa20.49■□□□□ 0.87
SEMA4B-201ENST00000332496 RUSC2Q8N2Y8 1516 aa20.48■□□□□ 0.87
SEMA4B-201ENST00000332496 NEFLP07196 543 aa20.45■□□□□ 0.86
SEMA4B-201ENST00000332496 FKBP8Q14318 412 aa20.45■□□□□ 0.86
SEMA4B-201ENST00000332496 GOLGA3Q08378 1498 aa20.44■□□□□ 0.86
SEMA4B-201ENST00000332496 CLIP1P30622 1438 aa20.41■□□□□ 0.86
SEMA4B-201ENST00000332496 EEA1Q15075 1411 aa20.39■□□□□ 0.86
SEMA4B-201ENST00000332496 KCNH8Q96L42 1107 aa20.36■□□□□ 0.85
SEMA4B-201ENST00000332496 BAZ1AQ9NRL2 1556 aaPredicted RBP20.31■□□□□ 0.84
SEMA4B-201ENST00000332496 ERICH6Q7L0X2 663 aa20.28■□□□□ 0.84
SEMA4B-201ENST00000332496 DDX10Q13206 875 aaKnown RBP20.28■□□□□ 0.84
SEMA4B-201ENST00000332496 VPS8Q8N3P4 1428 aa20.24■□□□□ 0.83
SEMA4B-201ENST00000332496 TRIM52Q96A61 297 aa20.23■□□□□ 0.83
SEMA4B-201ENST00000332496 DHX57Q6P158 1386 aaKnown RBP20.23■□□□□ 0.83
SEMA4B-201ENST00000332496 CEP164Q9UPV0 1460 aa20.22■□□□□ 0.83
SEMA4B-201ENST00000332496 NACADO15069 1562 aa20.21■□□□□ 0.83
SEMA4B-201ENST00000332496 RBM19Q9Y4C8 960 aaKnown RBP20.2■□□□□ 0.82
SEMA4B-201ENST00000332496 TOP2AP11388 1531 aaKnown RBP20.15■□□□□ 0.82
SEMA4B-201ENST00000332496 HIRIP3Q9BW71 556 aaPredicted RBP20.15■□□□□ 0.82
SEMA4B-201ENST00000332496 EIF4G1Q04637 1599 aaKnown RBP20.14■□□□□ 0.82
SEMA4B-201ENST00000332496 KANK4Q5T7N3 995 aaPredicted RBP20.13■□□□□ 0.81
SEMA4B-201ENST00000332496 SMARCA2P51531 1590 aa20.08■□□□□ 0.81
SEMA4B-201ENST00000332496 ANP32CO43423 234 aa20.07■□□□□ 0.8
SEMA4B-201ENST00000332496 RAPGEF2Q9Y4G8 1499 aa20.05■□□□□ 0.8
SEMA4B-201ENST00000332496 ATP1B4Q9UN42 357 aaPredicted RBP20.04■□□□□ 0.8
SEMA4B-201ENST00000332496 IRX6P78412 446 aaPredicted RBP20.02■□□□□ 0.8
SEMA4B-201ENST00000332496 FAM50AQ14320 339 aaKnown RBP20■□□□□ 0.79
SEMA4B-201ENST00000332496 SIN3AQ96ST3 1273 aa20■□□□□ 0.79
SEMA4B-201ENST00000332496 CDK11AQ9UQ88 783 aaPredicted RBP19.99■□□□□ 0.79
SEMA4B-201ENST00000332496 SMARCA4P51532 1647 aa19.93■□□□□ 0.78
SEMA4B-201ENST00000332496 KIF21BO75037 1637 aa19.93■□□□□ 0.78
SEMA4B-201ENST00000332496 CCNB3Q8WWL7 1395 aa19.92■□□□□ 0.78
SEMA4B-201ENST00000332496 HNRNPUQ00839 825 aaKnown RBP eCLIP19.9■□□□□ 0.78
SEMA4B-201ENST00000332496 RAB3GAP2Q9H2M9 1393 aa19.87■□□□□ 0.77
SEMA4B-201ENST00000332496 BAZ1BQ9UIG0 1483 aaKnown RBP19.86■□□□□ 0.77
SEMA4B-201ENST00000332496 MSH5O43196 834 aa19.85■□□□□ 0.77
SEMA4B-201ENST00000332496 SYNJ1O43426 1573 aa19.82■□□□□ 0.76
SEMA4B-201ENST00000332496 CCER2I3L3R5 266 aa19.79■□□□□ 0.76
SEMA4B-201ENST00000332496 PPP1R15AO75807 674 aaPredicted RBP19.77■□□□□ 0.76
SEMA4B-201ENST00000332496 P3H3Q8IVL6 736 aa19.74■□□□□ 0.75
SEMA4B-201ENST00000332496 NBR1Q14596 966 aa19.73■□□□□ 0.75
SEMA4B-201ENST00000332496 RRBP1Q9P2E9 1410 aaKnown RBP19.72■□□□□ 0.75
SEMA4B-201ENST00000332496 SETD5Q9C0A6 1442 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms