RNA–Protein interactions for RNA: ENST00000395573.8

CNIH1-202, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 1 (best) BASIC

Gene CNIH1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-202ENST00000395573 AEBP2Q6ZN18 517 aaPredicted RBP27.74■■■□□ 2.03
CNIH1-202ENST00000395573 NISCHQ9Y2I1 1504 aa27.65■■■□□ 2.02
CNIH1-202ENST00000395573 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
CNIH1-202ENST00000395573 CCDC180Q9P1Z9 1646 aa24.94■■□□□ 1.58
CNIH1-202ENST00000395573 ABCC9O60706 1549 aa24.72■■□□□ 1.55
CNIH1-202ENST00000395573 SENP3Q9H4L4 574 aaPredicted RBP23.68■■□□□ 1.38
CNIH1-202ENST00000395573 RB1CC1Q8TDY2 1594 aa23.63■■□□□ 1.37
CNIH1-202ENST00000395573 NACADO15069 1562 aa23.44■■□□□ 1.34
CNIH1-202ENST00000395573 PHF23Q9BUL5 403 aaPredicted RBP23.4■■□□□ 1.34
CNIH1-202ENST00000395573 UNC13AQ9UPW8 1703 aa23.28■■□□□ 1.32
CNIH1-202ENST00000395573 DCAF8L2P0C7V8 631 aa23.24■■□□□ 1.31
CNIH1-202ENST00000395573 MYO15BQ96JP2 1530 aa23.1■■□□□ 1.29
CNIH1-202ENST00000395573 DNAJC5BQ9UF47 199 aa23.02■■□□□ 1.28
CNIH1-202ENST00000395573 PABPN1Q86U42 306 aaKnown RBP eCLIP22.95■■□□□ 1.26
CNIH1-202ENST00000395573 ZCCHC6Q5VYS8 1495 aaKnown RBP22.93■■□□□ 1.26
CNIH1-202ENST00000395573 BICRAQ9NZM4 1560 aa22.92■■□□□ 1.26
CNIH1-202ENST00000395573 DCAF1Q9Y4B6 1507 aa22.85■■□□□ 1.25
CNIH1-202ENST00000395573 SCRIBQ14160 1630 aa22.68■■□□□ 1.22
CNIH1-202ENST00000395573 SHROOM4Q9ULL8 1493 aa22.58■■□□□ 1.2
CNIH1-202ENST00000395573 CC2D2AQ9P2K1 1620 aa22.4■■□□□ 1.18
CNIH1-202ENST00000395573 EIF4G1Q04637 1599 aaKnown RBP22.35■■□□□ 1.17
CNIH1-202ENST00000395573 CECR2Q9BXF3 1484 aa22.25■■□□□ 1.15
CNIH1-202ENST00000395573 FOXD1Q16676 465 aa21.99■■□□□ 1.11
CNIH1-202ENST00000395573 SMARCA4P51532 1647 aa21.63■■□□□ 1.05
CNIH1-202ENST00000395573 NCAPD3P42695 1498 aa21.57■■□□□ 1.04
CNIH1-202ENST00000395573 SMARCA2P51531 1590 aa21.54■■□□□ 1.04
CNIH1-202ENST00000395573 ATAD2BQ9ULI0 1458 aa21.52■■□□□ 1.04
CNIH1-202ENST00000395573 HMGXB3Q12766 1538 aa21.5■■□□□ 1.03
CNIH1-202ENST00000395573 BAZ1AQ9NRL2 1556 aaPredicted RBP21.49■■□□□ 1.03
CNIH1-202ENST00000395573 PLPPR3Q6T4P5 718 aa21.48■■□□□ 1.03
CNIH1-202ENST00000395573 PEG3Q9GZU2 1588 aa21.38■■□□□ 1.01
CNIH1-202ENST00000395573 BAZ1BQ9UIG0 1483 aaKnown RBP21.37■■□□□ 1.01
CNIH1-202ENST00000395573 ERCC6Q03468 1493 aa21.36■■□□□ 1.01
CNIH1-202ENST00000395573 MROH2BQ7Z745 1585 aa21.31■■□□□ 1
CNIH1-202ENST00000395573 CUX2O14529 1486 aa21.28■■□□□ 1
CNIH1-202ENST00000395573 NESP48681 1621 aa21.26■□□□□ 0.99
CNIH1-202ENST00000395573 LAMC3Q9Y6N6 1575 aa21.18■□□□□ 0.98
CNIH1-202ENST00000395573 KIF21AQ7Z4S6 1674 aa21.16■□□□□ 0.98
CNIH1-202ENST00000395573 WIZO95785 1651 aa21.15■□□□□ 0.98
CNIH1-202ENST00000395573 THOC2Q8NI27 1593 aaKnown RBP21.11■□□□□ 0.97
CNIH1-202ENST00000395573 DNAJC5Q9H3Z4 198 aa21.1■□□□□ 0.97
CNIH1-202ENST00000395573 PDS5BQ9NTI5 1447 aa20.96■□□□□ 0.95
CNIH1-202ENST00000395573 CADPSQ9ULU8 1353 aa20.9■□□□□ 0.94
CNIH1-202ENST00000395573 RSF1Q96T23 1441 aaPredicted RBP20.84■□□□□ 0.93
CNIH1-202ENST00000395573 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.92
CNIH1-202ENST00000395573 MRC2Q9UBG0 1479 aa20.81■□□□□ 0.92
CNIH1-202ENST00000395573 PRDM2Q13029 1718 aa20.81■□□□□ 0.92
CNIH1-202ENST00000395573 WDR62O43379 1518 aa20.78■□□□□ 0.92
CNIH1-202ENST00000395573 PPP6R1Q9UPN7 881 aa20.78■□□□□ 0.92
CNIH1-202ENST00000395573 CEP164Q9UPV0 1460 aa20.76■□□□□ 0.91
CNIH1-202ENST00000395573 ADRA2BP18089 450 aa20.76■□□□□ 0.91
CNIH1-202ENST00000395573 FANCD2Q9BXW9 1451 aa20.72■□□□□ 0.91
CNIH1-202ENST00000395573 CFTRP13569 1480 aa20.7■□□□□ 0.9
CNIH1-202ENST00000395573 PIAS4Q8N2W9 510 aaPredicted RBP20.67■□□□□ 0.9
CNIH1-202ENST00000395573 URB2Q14146 1524 aaKnown RBP20.55■□□□□ 0.88
CNIH1-202ENST00000395573 CCDC88BA6NC98 1476 aa20.54■□□□□ 0.88
CNIH1-202ENST00000395573 MSH5O43196 834 aa20.51■□□□□ 0.87
CNIH1-202ENST00000395573 TOPBP1Q92547 1522 aa20.35■□□□□ 0.85
CNIH1-202ENST00000395573 DNMBPQ6XZF7 1577 aa20.33■□□□□ 0.84
CNIH1-202ENST00000395573 IFT140Q96RY7 1462 aa20.3■□□□□ 0.84
CNIH1-202ENST00000395573 ABCC8Q09428 1581 aa20.3■□□□□ 0.84
CNIH1-202ENST00000395573 ZNF608Q9ULD9 1512 aaPredicted RBP20.27■□□□□ 0.84
CNIH1-202ENST00000395573 EIF4G3O43432 1585 aaKnown RBP20.27■□□□□ 0.84
CNIH1-202ENST00000395573 TRIM41Q8WV44 630 aa20.26■□□□□ 0.83
CNIH1-202ENST00000395573 OSCARQ8IYS5 282 aa20.24■□□□□ 0.83
CNIH1-202ENST00000395573 TARBP1Q13395 1621 aaKnown RBP20.22■□□□□ 0.83
CNIH1-202ENST00000395573 CHD1O14646 1710 aa20.2■□□□□ 0.82
CNIH1-202ENST00000395573 RIMBP3CA6NJZ7 1639 aa20.14■□□□□ 0.81
CNIH1-202ENST00000395573 RIMBP3BA6NNM3 1639 aa20.14■□□□□ 0.81
CNIH1-202ENST00000395573 RIMBP3Q9UFD9 1639 aa20.14■□□□□ 0.81
CNIH1-202ENST00000395573 POLA1P09884 1462 aaPredicted RBP20.13■□□□□ 0.81
CNIH1-202ENST00000395573 AQRO60306 1485 aaKnown RBP eCLIP20.08■□□□□ 0.81
CNIH1-202ENST00000395573 RAD54L2Q9Y4B4 1467 aa20.04■□□□□ 0.8
CNIH1-202ENST00000395573 CUX1P39880 1505 aa20.03■□□□□ 0.8
CNIH1-202ENST00000395573 WDR97A6NE52 1622 aa20.03■□□□□ 0.8
CNIH1-202ENST00000395573 FGD5Q6ZNL6 1462 aa20.03■□□□□ 0.8
CNIH1-202ENST00000395573 ARHGEF11O15085 1522 aa20.01■□□□□ 0.79
CNIH1-202ENST00000395573 SOGA1O94964 1423 aa20.01■□□□□ 0.79
CNIH1-202ENST00000395573 PBRM1Q86U86 1689 aa19.98■□□□□ 0.79
CNIH1-202ENST00000395573 SUPT5HO00267 1087 aaKnown RBP19.95■□□□□ 0.78
CNIH1-202ENST00000395573 TDRD9Q8NDG6 1382 aaKnown RBP19.94■□□□□ 0.78
CNIH1-202ENST00000395573 FBLN2P98095 1184 aa19.92■□□□□ 0.78
CNIH1-202ENST00000395573 SNAPC4Q5SXM2 1469 aa19.92■□□□□ 0.78
CNIH1-202ENST00000395573 MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
CNIH1-202ENST00000395573 GRIN2BQ13224 1484 aa19.86■□□□□ 0.77
CNIH1-202ENST00000395573 SYNJ1O43426 1573 aa19.84■□□□□ 0.77
CNIH1-202ENST00000395573 ABCA5Q8WWZ7 1642 aa19.84■□□□□ 0.77
CNIH1-202ENST00000395573 BIVM-ERCC5R4GMW8 1640 aa19.83■□□□□ 0.76
CNIH1-202ENST00000395573 CLASP1Q7Z460 1538 aa19.82■□□□□ 0.76
CNIH1-202ENST00000395573 POTEDQ86YR6 584 aa19.81■□□□□ 0.76
CNIH1-202ENST00000395573 GAPVD1Q14C86 1478 aa19.8■□□□□ 0.76
CNIH1-202ENST00000395573 ARAP1Q96P48 1450 aa19.8■□□□□ 0.76
CNIH1-202ENST00000395573 ABCA10Q8WWZ4 1543 aa19.79■□□□□ 0.76
CNIH1-202ENST00000395573 SYNJ2O15056 1496 aa19.79■□□□□ 0.76
CNIH1-202ENST00000395573 TOP2BQ02880 1626 aa19.77■□□□□ 0.76
CNIH1-202ENST00000395573 CYB5RLQ6IPT4 315 aa19.77■□□□□ 0.76
CNIH1-202ENST00000395573 CHMP7Q8WUX9 453 aaPredicted RBP19.77■□□□□ 0.76
CNIH1-202ENST00000395573 WRNQ14191 1432 aaPredicted RBP eCLIP19.7■□□□□ 0.74
CNIH1-202ENST00000395573 ADAMTS12P58397 1594 aa19.67■□□□□ 0.74
CNIH1-202ENST00000395573 GRIN2AQ12879 1464 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms