RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 AEBP2Q6ZN18 517 aaPredicted RBP11.09□□□□□ -0.63
CD46-219ENST00000636114 CHIC1Q5VXU3 224 aa10.91□□□□□ -0.66
CD46-219ENST00000636114 POTEDQ86YR6 584 aa10.78□□□□□ -0.68
CD46-219ENST00000636114 PHF23Q9BUL5 403 aaPredicted RBP9.59□□□□□ -0.87
CD46-219ENST00000636114 SENP3Q9H4L4 574 aaPredicted RBP9.44□□□□□ -0.9
CD46-219ENST00000636114 PLPPR3Q6T4P5 718 aa8.9□□□□□ -0.98
CD46-219ENST00000636114 FOXD1Q16676 465 aa8.73□□□□□ -1.01
CD46-219ENST00000636114 ADRA2BP18089 450 aa8.43□□□□□ -1.06
CD46-219ENST00000636114 PPP6R1Q9UPN7 881 aa8.43□□□□□ -1.06
CD46-219ENST00000636114 MSH5O43196 834 aa8.28□□□□□ -1.08
CD46-219ENST00000636114 PIAS4Q8N2W9 510 aaPredicted RBP8.26□□□□□ -1.09
CD46-219ENST00000636114 POTEHQ6S545 545 aa8.06□□□□□ -1.12
CD46-219ENST00000636114 PPP4R3CPQ6ZMV5 832 aa7.83□□□□□ -1.16
CD46-219ENST00000636114 CACNB1Q02641 598 aaPredicted RBP7.8□□□□□ -1.16
CD46-219ENST00000636114 SCAF1Q9H7N4 1312 aaKnown RBP7.75□□□□□ -1.17
CD46-219ENST00000636114 KCNA4P22459 653 aa7.72□□□□□ -1.17
CD46-219ENST00000636114 NCBP3Q53F19 620 aaKnown RBP7.67□□□□□ -1.18
CD46-219ENST00000636114 MAPK8IP2Q13387 824 aaPredicted RBP7.62□□□□□ -1.19
CD46-219ENST00000636114 CNKSR2Q8WXI2 1034 aa7.61□□□□□ -1.19
CD46-219ENST00000636114 NPM3O75607 178 aaKnown RBP7.54□□□□□ -1.2
CD46-219ENST00000636114 DMRT2Q9Y5R5 561 aa7.54□□□□□ -1.2
CD46-219ENST00000636114 PLSCR2Q9NRY7 297 aa7.51□□□□□ -1.21
CD46-219ENST00000636114 RNF216Q9NWF9 866 aaPredicted RBP7.46□□□□□ -1.22
CD46-219ENST00000636114 HOXD11P31277 338 aaPredicted RBP7.4□□□□□ -1.22
CD46-219ENST00000636114 SLC4A1APQ9BWU0 796 aaKnown RBP7.37□□□□□ -1.23
CD46-219ENST00000636114 DNAJC5BQ9UF47 199 aa7.34□□□□□ -1.23
CD46-219ENST00000636114 EHMT2Q96KQ7 1210 aa7.23□□□□□ -1.25
CD46-219ENST00000636114 DCAF8L1A6NGE4 600 aa7.2□□□□□ -1.26
CD46-219ENST00000636114 CSRNP3Q8WYN3 585 aa7.12□□□□□ -1.27
CD46-219ENST00000636114 FOXD4L1Q9NU39 408 aa7.1□□□□□ -1.27
CD46-219ENST00000636114 ZBTB22O15209 634 aa7.1□□□□□ -1.27
CD46-219ENST00000636114 SLC4A2P04920 1241 aa7.1□□□□□ -1.27
CD46-219ENST00000636114 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.05□□□□□ -1.284e-9■■□□□ 11.7
CD46-219ENST00000636114 MYCNP04198 464 aaPredicted RBP6.98□□□□□ -1.29
CD46-219ENST00000636114 U3KPZ7 1027 aaPredicted RBP6.95□□□□□ -1.3
CD46-219ENST00000636114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.91□□□□□ -1.3
CD46-219ENST00000636114 HNRNPUL2Q1KMD3 747 aaKnown RBP6.91□□□□□ -1.3
CD46-219ENST00000636114 RNF39Q9H2S5 420 aa6.89□□□□□ -1.31
CD46-219ENST00000636114 SAMD1Q6SPF0 538 aaPredicted RBP6.88□□□□□ -1.31
CD46-219ENST00000636114 ATXN8OSP0DMR3 200 aa6.86□□□□□ -1.31
CD46-219ENST00000636114 APLP2Q06481 763 aa6.83□□□□□ -1.32
CD46-219ENST00000636114 C1QBPQ07021 282 aaKnown RBP6.83□□□□□ -1.32
CD46-219ENST00000636114 ATF5Q9Y2D1 282 aaPredicted RBP6.75□□□□□ -1.33
CD46-219ENST00000636114 SPINK5Q9NQ38 1064 aaPredicted RBP6.72□□□□□ -1.33
CD46-219ENST00000636114 ZNF219Q9P2Y4 722 aaPredicted RBP6.71□□□□□ -1.34
CD46-219ENST00000636114 CAPN15O75808 1086 aa6.7□□□□□ -1.34
CD46-219ENST00000636114 TRHP20396 242 aaPredicted RBP6.69□□□□□ -1.34
CD46-219ENST00000636114 SP7Q8TDD2 431 aaPredicted RBP6.65□□□□□ -1.35
CD46-219ENST00000636114 POLA2Q14181 598 aa6.59□□□□□ -1.35
CD46-219ENST00000636114 DSG3P32926 999 aa6.57□□□□□ -1.36
CD46-219ENST00000636114 ABCB7O75027 752 aa6.57□□□□□ -1.36
CD46-219ENST00000636114 ZBTB12Q9Y330 459 aaPredicted RBP6.52□□□□□ -1.37
CD46-219ENST00000636114 FBLN2P98095 1184 aa6.51□□□□□ -1.37
CD46-219ENST00000636114 MKRN4PQ13434 485 aaPredicted RBP6.48□□□□□ -1.37
CD46-219ENST00000636114 FKBP8Q14318 412 aa6.43□□□□□ -1.38
CD46-219ENST00000636114 SPDYE4A6NLX3 237 aa6.37□□□□□ -1.39
CD46-219ENST00000636114 OSCARQ8IYS5 282 aa6.37□□□□□ -1.39
CD46-219ENST00000636114 SPDYE2BA6NHP3 402 aa6.33□□□□□ -1.4
CD46-219ENST00000636114 SPDYE6P0CI01 402 aa6.33□□□□□ -1.4
CD46-219ENST00000636114 SPDYE2Q495Y8 402 aa6.33□□□□□ -1.4
CD46-219ENST00000636114 ZNF692Q9BU19 519 aaPredicted RBP6.31□□□□□ -1.4
CD46-219ENST00000636114 RBM42Q9BTD8 480 aaKnown RBP6.29□□□□□ -1.4
CD46-219ENST00000636114 SSUH2Q9Y2M2 353 aa6.29□□□□□ -1.4
CD46-219ENST00000636114 PROM2Q8N271 834 aa6.28□□□□□ -1.4
CD46-219ENST00000636114 PCDH10Q9P2E7 1040 aa6.23□□□□□ -1.41
CD46-219ENST00000636114 PABPN1Q86U42 306 aaKnown RBP eCLIP6.22□□□□□ -1.41
CD46-219ENST00000636114 AKT1S1Q96B36 256 aa6.21□□□□□ -1.41
CD46-219ENST00000636114 FBXO3Q9UK99 471 aa6.21□□□□□ -1.41
CD46-219ENST00000636114 LHX8Q68G74 356 aa6.21□□□□□ -1.42
CD46-219ENST00000636114 REM2Q8IYK8 340 aaPredicted RBP6.14□□□□□ -1.43
CD46-219ENST00000636114 STAG3Q9UJ98 1225 aa6.14□□□□□ -1.43
CD46-219ENST00000636114 SPDYE1Q8NFV5 336 aaPredicted RBP6.13□□□□□ -1.43
CD46-219ENST00000636114 VASPP50552 380 aaPredicted RBP6.11□□□□□ -1.43
CD46-219ENST00000636114 CHRDL2Q6WN34 429 aa6.1□□□□□ -1.43
CD46-219ENST00000636114 CLEC11AQ9Y240 323 aa6.09□□□□□ -1.43
CD46-219ENST00000636114 PITPNM1O00562 1244 aa6.07□□□□□ -1.44
CD46-219ENST00000636114 PRR29P0C7W0 189 aa6.05□□□□□ -1.44
CD46-219ENST00000636114 MIER1Q8N108 512 aa6.03□□□□□ -1.44
CD46-219ENST00000636114 PLCD3Q8N3E9 789 aa6.03□□□□□ -1.44
CD46-219ENST00000636114 PLEKHG5O94827 1062 aa6.03□□□□□ -1.44
CD46-219ENST00000636114 IFNLR1Q8IU57 520 aaPredicted RBP6.02□□□□□ -1.45
CD46-219ENST00000636114 AMER1Q5JTC6 1135 aaPredicted RBP5.99□□□□□ -1.45
CD46-219ENST00000636114 ZBTB47Q9UFB7 747 aaPredicted RBP5.99□□□□□ -1.45
CD46-219ENST00000636114 KLHL34Q8N239 644 aa5.98□□□□□ -1.45
CD46-219ENST00000636114 CREBZFQ9NS37 354 aa5.97□□□□□ -1.45
CD46-219ENST00000636114 SPOCK2Q92563 424 aa5.95□□□□□ -1.46
CD46-219ENST00000636114 RTN4Q9NQC3 1192 aaKnown RBP5.95□□□□□ -1.46
CD46-219ENST00000636114 FXR2P51116 673 aaKnown RBP eCLIP5.94□□□□□ -1.46
CD46-219ENST00000636114 MNX1P50219 401 aaPredicted RBP5.92□□□□□ -1.46
CD46-219ENST00000636114 HAX1O00165 279 aa5.92□□□□□ -1.46
CD46-219ENST00000636114 PRKAR2AP13861 404 aaKnown RBP5.92□□□□□ -1.46
CD46-219ENST00000636114 CHADLQ6NUI6 762 aa5.92□□□□□ -1.46
CD46-219ENST00000636114 PIP4P2Q8N4L2 257 aa5.92□□□□□ -1.46
CD46-219ENST00000636114 NPM1P06748 294 aaKnown RBP eCLIP5.89□□□□□ -1.47
CD46-219ENST00000636114 FARP1Q9Y4F1 1045 aaPredicted RBP5.89□□□□□ -1.47
CD46-219ENST00000636114 POTEMA6NI47 508 aa5.88□□□□□ -1.47
CD46-219ENST00000636114 NUBP1P53384 320 aa5.87□□□□□ -1.47
CD46-219ENST00000636114 PKD2Q13563 968 aa5.84□□□□□ -1.47
CD46-219ENST00000636114 FAM212AQ96EL1 285 aa5.84□□□□□ -1.47
CD46-219ENST00000636114 GSE1Q14687 1217 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms