RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 NISCHQ9Y2I1 1504 aa37.23■■■■□ 3.55
TNFRSF12A-202ENST00000341627 CCDC180Q9P1Z9 1646 aa33.07■■■□□ 2.88
TNFRSF12A-202ENST00000341627 ABCC9O60706 1549 aa32.77■■■□□ 2.84
TNFRSF12A-202ENST00000341627 RB1CC1Q8TDY2 1594 aa31.31■■■□□ 2.6
TNFRSF12A-202ENST00000341627 DCAF8L2P0C7V8 631 aa31.27■■■□□ 2.6
TNFRSF12A-202ENST00000341627 NACADO15069 1562 aa31.25■■■□□ 2.59
TNFRSF12A-202ENST00000341627 MYO15BQ96JP2 1530 aa31.01■■■□□ 2.55
TNFRSF12A-202ENST00000341627 ZCCHC6Q5VYS8 1495 aaKnown RBP30.94■■■□□ 2.54
TNFRSF12A-202ENST00000341627 DCAF1Q9Y4B6 1507 aa30.77■■■□□ 2.52
TNFRSF12A-202ENST00000341627 PABPN1Q86U42 306 aaKnown RBP eCLIP30.65■■■□□ 2.52e-6■□□□□ 8.8
TNFRSF12A-202ENST00000341627 UNC13AQ9UPW8 1703 aa30.5■■■□□ 2.47
TNFRSF12A-202ENST00000341627 DNAJC5BQ9UF47 199 aa30.45■■■□□ 2.47
TNFRSF12A-202ENST00000341627 BICRAQ9NZM4 1560 aa30.44■■■□□ 2.46
TNFRSF12A-202ENST00000341627 SCRIBQ14160 1630 aa30.22■■■□□ 2.43
TNFRSF12A-202ENST00000341627 SHROOM4Q9ULL8 1493 aa30.06■■■□□ 2.4
TNFRSF12A-202ENST00000341627 EIF4G1Q04637 1599 aaKnown RBP29.64■■■□□ 2.33
TNFRSF12A-202ENST00000341627 CC2D2AQ9P2K1 1620 aa29.56■■■□□ 2.32
TNFRSF12A-202ENST00000341627 CECR2Q9BXF3 1484 aa29.47■■■□□ 2.31
TNFRSF12A-202ENST00000341627 NCAPD3P42695 1498 aa28.91■■■□□ 2.22
TNFRSF12A-202ENST00000341627 ATAD2BQ9ULI0 1458 aa28.88■■■□□ 2.21
TNFRSF12A-202ENST00000341627 SMARCA4P51532 1647 aa28.87■■■□□ 2.21
TNFRSF12A-202ENST00000341627 BAZ1AQ9NRL2 1556 aaPredicted RBP28.82■■■□□ 2.2
TNFRSF12A-202ENST00000341627 SMARCA2P51531 1590 aa28.75■■■□□ 2.19
TNFRSF12A-202ENST00000341627 MROH2BQ7Z745 1585 aa28.7■■■□□ 2.18
TNFRSF12A-202ENST00000341627 HMGXB3Q12766 1538 aa28.66■■■□□ 2.18
TNFRSF12A-202ENST00000341627 PEG3Q9GZU2 1588 aa28.63■■■□□ 2.17
TNFRSF12A-202ENST00000341627 BAZ1BQ9UIG0 1483 aaKnown RBP28.58■■■□□ 2.17
TNFRSF12A-202ENST00000341627 RSF1Q96T23 1441 aaPredicted RBP28.32■■■□□ 2.12
TNFRSF12A-202ENST00000341627 WIZO95785 1651 aa28.3■■■□□ 2.12
TNFRSF12A-202ENST00000341627 NESP48681 1621 aa28.29■■■□□ 2.12
TNFRSF12A-202ENST00000341627 ERCC6Q03468 1493 aa28.21■■■□□ 2.11
TNFRSF12A-202ENST00000341627 LAMC3Q9Y6N6 1575 aa28.09■■■□□ 2.09
TNFRSF12A-202ENST00000341627 CADPSQ9ULU8 1353 aa28.07■■■□□ 2.08
TNFRSF12A-202ENST00000341627 TOP2AP11388 1531 aaKnown RBP28.02■■■□□ 2.08
TNFRSF12A-202ENST00000341627 CUX2O14529 1486 aa28.02■■■□□ 2.08
TNFRSF12A-202ENST00000341627 PDS5BQ9NTI5 1447 aa27.98■■■□□ 2.07
TNFRSF12A-202ENST00000341627 CFTRP13569 1480 aa27.83■■■□□ 2.04
TNFRSF12A-202ENST00000341627 THOC2Q8NI27 1593 aaKnown RBP27.82■■■□□ 2.04
TNFRSF12A-202ENST00000341627 KIF21AQ7Z4S6 1674 aa27.8■■■□□ 2.04
TNFRSF12A-202ENST00000341627 CCDC88BA6NC98 1476 aa27.75■■■□□ 2.03
TNFRSF12A-202ENST00000341627 SUPT5HO00267 1087 aaKnown RBP27.73■■■□□ 2.03
TNFRSF12A-202ENST00000341627 FANCD2Q9BXW9 1451 aa27.7■■■□□ 2.03
TNFRSF12A-202ENST00000341627 MRC2Q9UBG0 1479 aa27.69■■■□□ 2.02
TNFRSF12A-202ENST00000341627 CEP164Q9UPV0 1460 aa27.65■■■□□ 2.02
TNFRSF12A-202ENST00000341627 WDR62O43379 1518 aa27.59■■■□□ 2.01
TNFRSF12A-202ENST00000341627 DNAJC5Q9H3Z4 198 aa27.59■■■□□ 2.01
TNFRSF12A-202ENST00000341627 URB2Q14146 1524 aaKnown RBP27.45■■□□□ 1.98
TNFRSF12A-202ENST00000341627 PRDM2Q13029 1718 aa27.36■■□□□ 1.97
TNFRSF12A-202ENST00000341627 TOPBP1Q92547 1522 aa27.22■■□□□ 1.95
TNFRSF12A-202ENST00000341627 ABCC8Q09428 1581 aa27.18■■□□□ 1.94
TNFRSF12A-202ENST00000341627 DNMBPQ6XZF7 1577 aa27.12■■□□□ 1.93
TNFRSF12A-202ENST00000341627 IFT140Q96RY7 1462 aa27.12■■□□□ 1.93
TNFRSF12A-202ENST00000341627 ZNF608Q9ULD9 1512 aaPredicted RBP27.06■■□□□ 1.92
TNFRSF12A-202ENST00000341627 POLA1P09884 1462 aaPredicted RBP26.99■■□□□ 1.91
TNFRSF12A-202ENST00000341627 CUX1P39880 1505 aa26.92■■□□□ 1.9
TNFRSF12A-202ENST00000341627 TARBP1Q13395 1621 aaKnown RBP26.91■■□□□ 1.9
TNFRSF12A-202ENST00000341627 RAD54L2Q9Y4B4 1467 aa26.9■■□□□ 1.9
TNFRSF12A-202ENST00000341627 OSCARQ8IYS5 282 aa26.89■■□□□ 1.9
TNFRSF12A-202ENST00000341627 SOGA1O94964 1423 aa26.89■■□□□ 1.89
TNFRSF12A-202ENST00000341627 AQRO60306 1485 aaKnown RBP eCLIP26.88■■□□□ 1.892e-6■■■■■ 28.3
TNFRSF12A-202ENST00000341627 FGD5Q6ZNL6 1462 aa26.87■■□□□ 1.89
TNFRSF12A-202ENST00000341627 EIF4G3O43432 1585 aaKnown RBP26.83■■□□□ 1.89
TNFRSF12A-202ENST00000341627 TDRD9Q8NDG6 1382 aaKnown RBP26.81■■□□□ 1.88
TNFRSF12A-202ENST00000341627 WRNQ14191 1432 aaPredicted RBP eCLIP26.73■■□□□ 1.87
TNFRSF12A-202ENST00000341627 WDR97A6NE52 1622 aa26.62■■□□□ 1.85
TNFRSF12A-202ENST00000341627 TOP2BQ02880 1626 aa26.62■■□□□ 1.85
TNFRSF12A-202ENST00000341627 BIVM-ERCC5R4GMW8 1640 aa26.61■■□□□ 1.85
TNFRSF12A-202ENST00000341627 ABCA10Q8WWZ4 1543 aa26.6■■□□□ 1.85
TNFRSF12A-202ENST00000341627 SYNJ1O43426 1573 aa26.6■■□□□ 1.85
TNFRSF12A-202ENST00000341627 FBLN2P98095 1184 aa26.6■■□□□ 1.85
TNFRSF12A-202ENST00000341627 GRIN2BQ13224 1484 aa26.57■■□□□ 1.84
TNFRSF12A-202ENST00000341627 SNAPC4Q5SXM2 1469 aa26.57■■□□□ 1.84
TNFRSF12A-202ENST00000341627 GAPVD1Q14C86 1478 aa26.55■■□□□ 1.84
TNFRSF12A-202ENST00000341627 TRIM41Q8WV44 630 aa26.52■■□□□ 1.84
TNFRSF12A-202ENST00000341627 MAGI1Q96QZ7 1491 aaPredicted RBP26.51■■□□□ 1.83
TNFRSF12A-202ENST00000341627 CHMP7Q8WUX9 453 aaPredicted RBP26.49■■□□□ 1.83
TNFRSF12A-202ENST00000341627 CHD1O14646 1710 aa26.48■■□□□ 1.83
TNFRSF12A-202ENST00000341627 ABCA5Q8WWZ7 1642 aa26.46■■□□□ 1.83
TNFRSF12A-202ENST00000341627 SYNJ2O15056 1496 aa26.43■■□□□ 1.82
TNFRSF12A-202ENST00000341627 ARHGEF11O15085 1522 aa26.39■■□□□ 1.81
TNFRSF12A-202ENST00000341627 RIMBP3CA6NJZ7 1639 aa26.37■■□□□ 1.81
TNFRSF12A-202ENST00000341627 RIMBP3BA6NNM3 1639 aa26.37■■□□□ 1.81
TNFRSF12A-202ENST00000341627 RIMBP3Q9UFD9 1639 aa26.37■■□□□ 1.81
TNFRSF12A-202ENST00000341627 PBRM1Q86U86 1689 aa26.35■■□□□ 1.81
TNFRSF12A-202ENST00000341627 CLASP1Q7Z460 1538 aa26.29■■□□□ 1.8
TNFRSF12A-202ENST00000341627 ERICH3Q5RHP9 1530 aa26.24■■□□□ 1.79
TNFRSF12A-202ENST00000341627 FHAD1B1AJZ9 1412 aa26.24■■□□□ 1.79
TNFRSF12A-202ENST00000341627 CYB5RLQ6IPT4 315 aa26.24■■□□□ 1.79
TNFRSF12A-202ENST00000341627 GRIN2AQ12879 1464 aa26.23■■□□□ 1.79
TNFRSF12A-202ENST00000341627 ADAMTS12P58397 1594 aa26.22■■□□□ 1.79
TNFRSF12A-202ENST00000341627 ARAP1Q96P48 1450 aa26.18■■□□□ 1.78
TNFRSF12A-202ENST00000341627 KIF27Q86VH2 1401 aa26.18■■□□□ 1.78
TNFRSF12A-202ENST00000341627 NUP160Q12769 1436 aa26.16■■□□□ 1.78
TNFRSF12A-202ENST00000341627 IGF1RP08069 1367 aa26.13■■□□□ 1.77
TNFRSF12A-202ENST00000341627 CEP170Q5SW79 1584 aa26.09■■□□□ 1.77
TNFRSF12A-202ENST00000341627 CUL7Q14999 1698 aa25.95■■□□□ 1.74
TNFRSF12A-202ENST00000341627 ERCC6L2Q5T890 1561 aa25.95■■□□□ 1.74
TNFRSF12A-202ENST00000341627 JPH4Q96JJ6 628 aa25.93■■□□□ 1.74
TNFRSF12A-202ENST00000341627 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
TNFRSF12A-202ENST00000341627 CARMIL1Q5VZK9 1371 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms