RNA–Protein interactions for RNA: ENST00000546155.5

LTBP4-206, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 1,285 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-206ENST00000546155 NISCHQ9Y2I1 1504 aa49■■■■■ 5.43
LTBP4-206ENST00000546155 CCDC180Q9P1Z9 1646 aa43.48■■■■■ 4.55
LTBP4-206ENST00000546155 ABCC9O60706 1549 aa43.14■■■■■ 4.5
LTBP4-206ENST00000546155 DCAF8L2P0C7V8 631 aa41.42■■■■■ 4.22
LTBP4-206ENST00000546155 RB1CC1Q8TDY2 1594 aa41.18■■■■■ 4.18
LTBP4-206ENST00000546155 NACADO15069 1562 aa41.05■■■■■ 4.16
LTBP4-206ENST00000546155 ZCCHC6Q5VYS8 1495 aaKnown RBP40.73■■■■■ 4.11
LTBP4-206ENST00000546155 MYO15BQ96JP2 1530 aa40.62■■■■■ 4.09
LTBP4-206ENST00000546155 PABPN1Q86U42 306 aaKnown RBP eCLIP40.41■■■■■ 4.06
LTBP4-206ENST00000546155 DCAF1Q9Y4B6 1507 aa40.39■■■■■ 4.06
LTBP4-206ENST00000546155 UNC13AQ9UPW8 1703 aa40.13■■■■■ 4.01
LTBP4-206ENST00000546155 BICRAQ9NZM4 1560 aa39.96■■■■□ 3.99
LTBP4-206ENST00000546155 DNAJC5BQ9UF47 199 aa39.92■■■■□ 3.98
LTBP4-206ENST00000546155 SCRIBQ14160 1630 aa39.9■■■■□ 3.98
LTBP4-206ENST00000546155 SHROOM4Q9ULL8 1493 aa39.36■■■■□ 3.89
LTBP4-206ENST00000546155 EIF4G1Q04637 1599 aaKnown RBP38.95■■■■□ 3.83
LTBP4-206ENST00000546155 CC2D2AQ9P2K1 1620 aa38.87■■■■□ 3.81
LTBP4-206ENST00000546155 CECR2Q9BXF3 1484 aa38.73■■■■□ 3.79
LTBP4-206ENST00000546155 SMARCA4P51532 1647 aa38.03■■■■□ 3.68
LTBP4-206ENST00000546155 ATAD2BQ9ULI0 1458 aa37.97■■■■□ 3.67
LTBP4-206ENST00000546155 BAZ1AQ9NRL2 1556 aaPredicted RBP37.95■■■■□ 3.67
LTBP4-206ENST00000546155 NCAPD3P42695 1498 aa37.95■■■■□ 3.67
LTBP4-206ENST00000546155 SMARCA2P51531 1590 aa37.82■■■■□ 3.65
LTBP4-206ENST00000546155 MROH2BQ7Z745 1585 aa37.82■■■■□ 3.65
LTBP4-206ENST00000546155 BAZ1BQ9UIG0 1483 aaKnown RBP37.65■■■■□ 3.62
LTBP4-206ENST00000546155 HMGXB3Q12766 1538 aa37.65■■■■□ 3.62
LTBP4-206ENST00000546155 PEG3Q9GZU2 1588 aa37.57■■■■□ 3.6
LTBP4-206ENST00000546155 WIZO95785 1651 aa37.36■■■■□ 3.57
LTBP4-206ENST00000546155 RSF1Q96T23 1441 aaPredicted RBP37.31■■■■□ 3.56
LTBP4-206ENST00000546155 NESP48681 1621 aa37.24■■■■□ 3.55
LTBP4-206ENST00000546155 ERCC6Q03468 1493 aa37.18■■■■□ 3.54
LTBP4-206ENST00000546155 LAMC3Q9Y6N6 1575 aa36.91■■■■□ 3.5
LTBP4-206ENST00000546155 TOP2AP11388 1531 aaKnown RBP36.9■■■■□ 3.5
LTBP4-206ENST00000546155 CADPSQ9ULU8 1353 aa36.9■■■■□ 3.5
LTBP4-206ENST00000546155 PDS5BQ9NTI5 1447 aa36.79■■■■□ 3.48
LTBP4-206ENST00000546155 CUX2O14529 1486 aa36.74■■■■□ 3.47
LTBP4-206ENST00000546155 KIF21AQ7Z4S6 1674 aa36.61■■■■□ 3.45
LTBP4-206ENST00000546155 CCDC88BA6NC98 1476 aa36.58■■■■□ 3.45
LTBP4-206ENST00000546155 CFTRP13569 1480 aa36.56■■■■□ 3.44
LTBP4-206ENST00000546155 THOC2Q8NI27 1593 aaKnown RBP36.55■■■■□ 3.44
LTBP4-206ENST00000546155 FANCD2Q9BXW9 1451 aa36.47■■■■□ 3.43
LTBP4-206ENST00000546155 SUPT5HO00267 1087 aaKnown RBP36.42■■■■□ 3.42
LTBP4-206ENST00000546155 MRC2Q9UBG0 1479 aa36.42■■■■□ 3.42
LTBP4-206ENST00000546155 CEP164Q9UPV0 1460 aa36.42■■■■□ 3.42
LTBP4-206ENST00000546155 WDR62O43379 1518 aa36.24■■■■□ 3.39
LTBP4-206ENST00000546155 URB2Q14146 1524 aaKnown RBP36.11■■■■□ 3.37
LTBP4-206ENST00000546155 DNAJC5Q9H3Z4 198 aa36.07■■■■□ 3.36
LTBP4-206ENST00000546155 PRDM2Q13029 1718 aa36.02■■■■□ 3.36
LTBP4-206ENST00000546155 TOPBP1Q92547 1522 aa35.83■■■■□ 3.33
LTBP4-206ENST00000546155 ABCC8Q09428 1581 aa35.72■■■■□ 3.31
LTBP4-206ENST00000546155 DNMBPQ6XZF7 1577 aa35.71■■■■□ 3.31
LTBP4-206ENST00000546155 IFT140Q96RY7 1462 aa35.66■■■■□ 3.3
LTBP4-206ENST00000546155 ZNF608Q9ULD9 1512 aaPredicted RBP35.6■■■■□ 3.29
LTBP4-206ENST00000546155 POLA1P09884 1462 aaPredicted RBP35.52■■■■□ 3.28
LTBP4-206ENST00000546155 CUX1P39880 1505 aa35.47■■■■□ 3.27
LTBP4-206ENST00000546155 RAD54L2Q9Y4B4 1467 aa35.47■■■■□ 3.27
LTBP4-206ENST00000546155 SOGA1O94964 1423 aa35.44■■■■□ 3.26
LTBP4-206ENST00000546155 AQRO60306 1485 aaKnown RBP eCLIP35.41■■■■□ 3.266e-7■■■□□ 15.3
LTBP4-206ENST00000546155 FGD5Q6ZNL6 1462 aa35.41■■■■□ 3.26
LTBP4-206ENST00000546155 TARBP1Q13395 1621 aaKnown RBP35.38■■■■□ 3.25
LTBP4-206ENST00000546155 OSCARQ8IYS5 282 aa35.34■■■■□ 3.25
LTBP4-206ENST00000546155 TDRD9Q8NDG6 1382 aaKnown RBP35.34■■■■□ 3.25
LTBP4-206ENST00000546155 EIF4G3O43432 1585 aaKnown RBP35.32■■■■□ 3.24
LTBP4-206ENST00000546155 WRNQ14191 1432 aaPredicted RBP eCLIP35.19■■■■□ 3.22
LTBP4-206ENST00000546155 FBLN2P98095 1184 aa35.17■■■■□ 3.22
LTBP4-206ENST00000546155 SYNJ1O43426 1573 aa35.06■■■■□ 3.2
LTBP4-206ENST00000546155 TOP2BQ02880 1626 aa35.02■■■■□ 3.2
LTBP4-206ENST00000546155 SNAPC4Q5SXM2 1469 aa35.02■■■■□ 3.2
LTBP4-206ENST00000546155 ABCA10Q8WWZ4 1543 aa35■■■■□ 3.19
LTBP4-206ENST00000546155 GRIN2BQ13224 1484 aa34.98■■■■□ 3.19
LTBP4-206ENST00000546155 GAPVD1Q14C86 1478 aa34.97■■■■□ 3.19
LTBP4-206ENST00000546155 BIVM-ERCC5R4GMW8 1640 aa34.97■■■■□ 3.19
LTBP4-206ENST00000546155 WDR97A6NE52 1622 aa34.95■■■■□ 3.19
LTBP4-206ENST00000546155 TRIM41Q8WV44 630 aa34.95■■■■□ 3.19
LTBP4-206ENST00000546155 CHMP7Q8WUX9 453 aaPredicted RBP34.94■■■■□ 3.18
LTBP4-206ENST00000546155 CHD1O14646 1710 aa34.89■■■■□ 3.18
LTBP4-206ENST00000546155 MAGI1Q96QZ7 1491 aaPredicted RBP34.86■■■■□ 3.17
LTBP4-206ENST00000546155 ABCA5Q8WWZ7 1642 aa34.82■■■■□ 3.16
LTBP4-206ENST00000546155 SYNJ2O15056 1496 aa34.77■■■■□ 3.16
LTBP4-206ENST00000546155 PBRM1Q86U86 1689 aa34.76■■■■□ 3.16
LTBP4-206ENST00000546155 RIMBP3CA6NJZ7 1639 aa34.66■■■■□ 3.14
LTBP4-206ENST00000546155 RIMBP3BA6NNM3 1639 aa34.66■■■■□ 3.14
LTBP4-206ENST00000546155 RIMBP3Q9UFD9 1639 aa34.66■■■■□ 3.14
LTBP4-206ENST00000546155 ARHGEF11O15085 1522 aa34.66■■■■□ 3.14
LTBP4-206ENST00000546155 CYB5RLQ6IPT4 315 aa34.56■■■■□ 3.12
LTBP4-206ENST00000546155 FHAD1B1AJZ9 1412 aa34.55■■■■□ 3.12
LTBP4-206ENST00000546155 ADAMTS12P58397 1594 aa34.54■■■■□ 3.12
LTBP4-206ENST00000546155 CLASP1Q7Z460 1538 aa34.54■■■■□ 3.12
LTBP4-206ENST00000546155 ERICH3Q5RHP9 1530 aa34.53■■■■□ 3.12
LTBP4-206ENST00000546155 GRIN2AQ12879 1464 aa34.52■■■■□ 3.12
LTBP4-206ENST00000546155 KIF27Q86VH2 1401 aa34.47■■■■□ 3.11
LTBP4-206ENST00000546155 IGF1RP08069 1367 aa34.4■■■■□ 3.1
LTBP4-206ENST00000546155 ARAP1Q96P48 1450 aa34.39■■■■□ 3.1
LTBP4-206ENST00000546155 NUP160Q12769 1436 aa34.37■■■■□ 3.09
LTBP4-206ENST00000546155 CEP170Q5SW79 1584 aa34.36■■■■□ 3.09
LTBP4-206ENST00000546155 CARMIL1Q5VZK9 1371 aa34.21■■■■□ 3.07
LTBP4-206ENST00000546155 RUSC2Q8N2Y8 1516 aa34.17■■■■□ 3.06
LTBP4-206ENST00000546155 ERCC6L2Q5T890 1561 aa34.16■■■■□ 3.06
LTBP4-206ENST00000546155 JPH4Q96JJ6 628 aa34.16■■■■□ 3.06
LTBP4-206ENST00000546155 CUL7Q14999 1698 aa34.12■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms