RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 NISCHQ9Y2I1 1504 aa38.21■■■■□ 3.71
SEMA4B-215ENST00000560089 CCDC180Q9P1Z9 1646 aa33.04■■■□□ 2.88
SEMA4B-215ENST00000560089 PELP1Q8IZL8 1130 aaKnown RBP33.01■■■□□ 2.87
SEMA4B-215ENST00000560089 HRCP23327 699 aa32.58■■■□□ 2.81
SEMA4B-215ENST00000560089 DCAF8L2P0C7V8 631 aa32.18■■■□□ 2.74
SEMA4B-215ENST00000560089 MYT1Q01538 1121 aa32.06■■■□□ 2.72
SEMA4B-215ENST00000560089 ZCCHC6Q5VYS8 1495 aaKnown RBP32.06■■■□□ 2.72
SEMA4B-215ENST00000560089 PPARGC1BQ86YN6 1023 aaKnown RBP31.82■■■□□ 2.68
SEMA4B-215ENST00000560089 SHROOM4Q9ULL8 1493 aa31.79■■■□□ 2.68
SEMA4B-215ENST00000560089 ABCC9O60706 1549 aa31.77■■■□□ 2.68
SEMA4B-215ENST00000560089 PCGF6Q9BYE7 350 aa31.41■■■□□ 2.62
SEMA4B-215ENST00000560089 SCAF1Q9H7N4 1312 aaKnown RBP31.36■■■□□ 2.61
SEMA4B-215ENST00000560089 DCAF1Q9Y4B6 1507 aa31.3■■■□□ 2.6
SEMA4B-215ENST00000560089 SCRIBQ14160 1630 aa30.84■■■□□ 2.53
SEMA4B-215ENST00000560089 NACADO15069 1562 aa30.84■■■□□ 2.53
SEMA4B-215ENST00000560089 MYO15BQ96JP2 1530 aa30.84■■■□□ 2.53
SEMA4B-215ENST00000560089 RB1CC1Q8TDY2 1594 aa30.64■■■□□ 2.5
SEMA4B-215ENST00000560089 SUPT5HO00267 1087 aaKnown RBP30.58■■■□□ 2.49
SEMA4B-215ENST00000560089 TTBK1Q5TCY1 1321 aaPredicted RBP30.37■■■□□ 2.45
SEMA4B-215ENST00000560089 ACIN1Q9UKV3 1341 aaKnown RBP30.31■■■□□ 2.44
SEMA4B-215ENST00000560089 ZEB1P37275 1124 aaPredicted RBP30.28■■■□□ 2.44
SEMA4B-215ENST00000560089 CHIC1Q5VXU3 224 aa30.16■■■□□ 2.42
SEMA4B-215ENST00000560089 NEUROD1Q13562 356 aa30.15■■■□□ 2.42
SEMA4B-215ENST00000560089 TRIM26Q12899 539 aaPredicted RBP30.14■■■□□ 2.42
SEMA4B-215ENST00000560089 PABPN1Q86U42 306 aaKnown RBP eCLIP30.14■■■□□ 2.42
SEMA4B-215ENST00000560089 UNC13AQ9UPW8 1703 aa30.14■■■□□ 2.42
SEMA4B-215ENST00000560089 GTF3C3Q9Y5Q9 886 aa30.12■■■□□ 2.41
SEMA4B-215ENST00000560089 CECR2Q9BXF3 1484 aa29.93■■■□□ 2.38
SEMA4B-215ENST00000560089 CENPBP07199 599 aaPredicted RBP29.83■■■□□ 2.37
SEMA4B-215ENST00000560089 BICRAQ9NZM4 1560 aa29.83■■■□□ 2.37
SEMA4B-215ENST00000560089 BCL11AQ9H165 835 aa29.8■■■□□ 2.36
SEMA4B-215ENST00000560089 RSF1Q96T23 1441 aaPredicted RBP29.77■■■□□ 2.36
SEMA4B-215ENST00000560089 MROH2BQ7Z745 1585 aa29.67■■■□□ 2.34
SEMA4B-215ENST00000560089 LOC105371045A0A1W2PR82 267 aa29.57■■■□□ 2.32
SEMA4B-215ENST00000560089 FAM9AQ8IZU1 332 aaPredicted RBP29.52■■■□□ 2.32
SEMA4B-215ENST00000560089 WIZO95785 1651 aa29.45■■■□□ 2.31
SEMA4B-215ENST00000560089 BAZ1AQ9NRL2 1556 aaPredicted RBP29.44■■■□□ 2.3
SEMA4B-215ENST00000560089 SMARCA4P51532 1647 aa29.36■■■□□ 2.29
SEMA4B-215ENST00000560089 PRKCSHP14314 528 aaPredicted RBP29.36■■■□□ 2.29
SEMA4B-215ENST00000560089 DIEXFQ68CQ4 756 aaKnown RBP29.26■■■□□ 2.27
SEMA4B-215ENST00000560089 ANP32EQ9BTT0 268 aa29.16■■■□□ 2.26
SEMA4B-215ENST00000560089 EIF4G1Q04637 1599 aaKnown RBP28.94■■■□□ 2.22
SEMA4B-215ENST00000560089 TOP2AP11388 1531 aaKnown RBP28.93■■■□□ 2.22
SEMA4B-215ENST00000560089 ATAD2BQ9ULI0 1458 aa28.92■■■□□ 2.22
SEMA4B-215ENST00000560089 YTHDC1Q96MU7 727 aaKnown RBP28.91■■■□□ 2.22
SEMA4B-215ENST00000560089 CSRNP3Q8WYN3 585 aa28.85■■■□□ 2.21
SEMA4B-215ENST00000560089 CCDC88BA6NC98 1476 aa28.81■■■□□ 2.2
SEMA4B-215ENST00000560089 PEG3Q9GZU2 1588 aa28.81■■■□□ 2.2
SEMA4B-215ENST00000560089 BAZ1BQ9UIG0 1483 aaKnown RBP28.78■■■□□ 2.2
SEMA4B-215ENST00000560089 CCER1Q8TC90 406 aaPredicted RBP28.77■■■□□ 2.2
SEMA4B-215ENST00000560089 SMARCA2P51531 1590 aa28.76■■■□□ 2.19
SEMA4B-215ENST00000560089 ERICH6Q7L0X2 663 aa28.75■■■□□ 2.19
SEMA4B-215ENST00000560089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.75■■■□□ 2.19
SEMA4B-215ENST00000560089 TRIM41Q8WV44 630 aa28.65■■■□□ 2.18
SEMA4B-215ENST00000560089 TSHZ2Q9NRE2 1034 aa28.56■■■□□ 2.16
SEMA4B-215ENST00000560089 CC2D2AQ9P2K1 1620 aa28.56■■■□□ 2.16
SEMA4B-215ENST00000560089 NCAPD3P42695 1498 aa28.55■■■□□ 2.16
SEMA4B-215ENST00000560089 ZNF316A6NFI3 1004 aaPredicted RBP28.44■■■□□ 2.14
SEMA4B-215ENST00000560089 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
SEMA4B-215ENST00000560089 SUPT16HQ9Y5B9 1047 aaKnown RBP28.42■■■□□ 2.14
SEMA4B-215ENST00000560089 APLP2Q06481 763 aa28.39■■■□□ 2.14
SEMA4B-215ENST00000560089 MIER1Q8N108 512 aa28.38■■■□□ 2.13
SEMA4B-215ENST00000560089 CLSPNQ9HAW4 1339 aa28.37■■■□□ 2.13
SEMA4B-215ENST00000560089 ABCC8Q09428 1581 aa28.37■■■□□ 2.13
SEMA4B-215ENST00000560089 DNAJC5BQ9UF47 199 aa28.28■■■□□ 2.12
SEMA4B-215ENST00000560089 EHMT2Q96KQ7 1210 aa28.19■■■□□ 2.1
SEMA4B-215ENST00000560089 WRNQ14191 1432 aaPredicted RBP eCLIP28.01■■■□□ 2.07
SEMA4B-215ENST00000560089 CFTRP13569 1480 aa27.98■■■□□ 2.07
SEMA4B-215ENST00000560089 CADPSQ9ULU8 1353 aa27.94■■■□□ 2.06
SEMA4B-215ENST00000560089 SYNJ1O43426 1573 aa27.92■■■□□ 2.06
SEMA4B-215ENST00000560089 NESP48681 1621 aa27.92■■■□□ 2.06
SEMA4B-215ENST00000560089 SOGA1O94964 1423 aa27.85■■■□□ 2.05
SEMA4B-215ENST00000560089 ANO8Q9HCE9 1232 aaPredicted RBP27.82■■■□□ 2.04
SEMA4B-215ENST00000560089 RBM19Q9Y4C8 960 aaKnown RBP27.8■■■□□ 2.04
SEMA4B-215ENST00000560089 RUSC2Q8N2Y8 1516 aa27.79■■■□□ 2.04
SEMA4B-215ENST00000560089 CUX1P39880 1505 aa27.7■■■□□ 2.02
SEMA4B-215ENST00000560089 BCANQ96GW7 911 aa27.68■■■□□ 2.02
SEMA4B-215ENST00000560089 FANCD2Q9BXW9 1451 aa27.68■■■□□ 2.02
SEMA4B-215ENST00000560089 TOP2BQ02880 1626 aa27.65■■■□□ 2.02
SEMA4B-215ENST00000560089 PRDM2Q13029 1718 aa27.65■■■□□ 2.02
SEMA4B-215ENST00000560089 MSH5O43196 834 aa27.63■■■□□ 2.01
SEMA4B-215ENST00000560089 BIVM-ERCC5R4GMW8 1640 aa27.56■■■□□ 2
SEMA4B-215ENST00000560089 MYT1LQ9UL68 1186 aa27.54■■■□□ 2
SEMA4B-215ENST00000560089 LAMC3Q9Y6N6 1575 aa27.53■■■□□ 2
SEMA4B-215ENST00000560089 DEKP35659 375 aaKnown RBP27.49■■□□□ 1.99
SEMA4B-215ENST00000560089 FKBP8Q14318 412 aa27.46■■□□□ 1.99
SEMA4B-215ENST00000560089 CEP164Q9UPV0 1460 aa27.45■■□□□ 1.98
SEMA4B-215ENST00000560089 SALL2Q9Y467 1007 aaPredicted RBP27.43■■□□□ 1.98
SEMA4B-215ENST00000560089 PDS5BQ9NTI5 1447 aa27.42■■□□□ 1.98
SEMA4B-215ENST00000560089 FGD5Q6ZNL6 1462 aa27.41■■□□□ 1.98
SEMA4B-215ENST00000560089 KIF21AQ7Z4S6 1674 aa27.39■■□□□ 1.98
SEMA4B-215ENST00000560089 UBTFP17480 764 aaKnown RBP27.39■■□□□ 1.98
SEMA4B-215ENST00000560089 EEA1Q15075 1411 aa27.38■■□□□ 1.97
SEMA4B-215ENST00000560089 UBE2Q2Q8WVN8 375 aa27.35■■□□□ 1.97
SEMA4B-215ENST00000560089 TOPBP1Q92547 1522 aa27.35■■□□□ 1.97
SEMA4B-215ENST00000560089 URB2Q14146 1524 aaKnown RBP27.34■■□□□ 1.97
SEMA4B-215ENST00000560089 FANCIQ9NVI1 1328 aa27.33■■□□□ 1.97
SEMA4B-215ENST00000560089 RAD54L2Q9Y4B4 1467 aa27.32■■□□□ 1.96
SEMA4B-215ENST00000560089 ERICH6BQ5W0A0 696 aa27.31■■□□□ 1.96
SEMA4B-215ENST00000560089 DNMBPQ6XZF7 1577 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms