RNA–Protein interactions for RNA: ENST00000525212.1

NDUFS3-203, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 530 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-203ENST00000525212 NISCHQ9Y2I1 1504 aa17■□□□□ 0.31
NDUFS3-203ENST00000525212 CCDC180Q9P1Z9 1646 aa14.66□□□□□ -0.06
NDUFS3-203ENST00000525212 ZCCHC6Q5VYS8 1495 aaKnown RBP14.39□□□□□ -0.11
NDUFS3-203ENST00000525212 SHROOM4Q9ULL8 1493 aa14.09□□□□□ -0.15
NDUFS3-203ENST00000525212 DCAF1Q9Y4B6 1507 aa14.03□□□□□ -0.16
NDUFS3-203ENST00000525212 MYO15BQ96JP2 1530 aa13.69□□□□□ -0.22
NDUFS3-203ENST00000525212 DCAF8L2P0C7V8 631 aa13.69□□□□□ -0.22
NDUFS3-203ENST00000525212 SUPT5HO00267 1087 aaKnown RBP13.61□□□□□ -0.23
NDUFS3-203ENST00000525212 SCRIBQ14160 1630 aa13.56□□□□□ -0.24
NDUFS3-203ENST00000525212 ABCC9O60706 1549 aa13.55□□□□□ -0.24
NDUFS3-203ENST00000525212 NACADO15069 1562 aa13.5□□□□□ -0.25
NDUFS3-203ENST00000525212 RSF1Q96T23 1441 aaPredicted RBP13.32□□□□□ -0.28
NDUFS3-203ENST00000525212 CHIC1Q5VXU3 224 aa13.31□□□□□ -0.28
NDUFS3-203ENST00000525212 RB1CC1Q8TDY2 1594 aa13.29□□□□□ -0.28
NDUFS3-203ENST00000525212 CECR2Q9BXF3 1484 aa13.25□□□□□ -0.29
NDUFS3-203ENST00000525212 UNC13AQ9UPW8 1703 aa13.25□□□□□ -0.29
NDUFS3-203ENST00000525212 MROH2BQ7Z745 1585 aa13.2□□□□□ -0.3
NDUFS3-203ENST00000525212 WIZO95785 1651 aa13.13□□□□□ -0.31
NDUFS3-203ENST00000525212 BICRAQ9NZM4 1560 aa13.08□□□□□ -0.32
NDUFS3-203ENST00000525212 BAZ1AQ9NRL2 1556 aaPredicted RBP13.07□□□□□ -0.32
NDUFS3-203ENST00000525212 EIF4G1Q04637 1599 aaKnown RBP13.05□□□□□ -0.32
NDUFS3-203ENST00000525212 SMARCA4P51532 1647 aa13.02□□□□□ -0.32
NDUFS3-203ENST00000525212 TOP2AP11388 1531 aaKnown RBP12.94□□□□□ -0.34
NDUFS3-203ENST00000525212 SMARCA2P51531 1590 aa12.89□□□□□ -0.35
NDUFS3-203ENST00000525212 PEG3Q9GZU2 1588 aa12.84□□□□□ -0.35
NDUFS3-203ENST00000525212 LOC105371045A0A1W2PR82 267 aa12.82□□□□□ -0.36
NDUFS3-203ENST00000525212 CCDC88BA6NC98 1476 aa12.82□□□□□ -0.36
NDUFS3-203ENST00000525212 PABPN1Q86U42 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
NDUFS3-203ENST00000525212 TRIM41Q8WV44 630 aa12.71□□□□□ -0.37
NDUFS3-203ENST00000525212 ABCC8Q09428 1581 aa12.71□□□□□ -0.37
NDUFS3-203ENST00000525212 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
NDUFS3-203ENST00000525212 FAM9AQ8IZU1 332 aaPredicted RBP12.57□□□□□ -0.4
NDUFS3-203ENST00000525212 BAZ1BQ9UIG0 1483 aaKnown RBP12.57□□□□□ -0.4
NDUFS3-203ENST00000525212 SYNJ1O43426 1573 aa12.54□□□□□ -0.4
NDUFS3-203ENST00000525212 HMGXB3Q12766 1538 aa12.52□□□□□ -0.41
NDUFS3-203ENST00000525212 RUSC2Q8N2Y8 1516 aa12.51□□□□□ -0.41
NDUFS3-203ENST00000525212 SOGA1O94964 1423 aa12.5□□□□□ -0.41
NDUFS3-203ENST00000525212 PCGF6Q9BYE7 350 aa12.49□□□□□ -0.41
NDUFS3-203ENST00000525212 NCAPD3P42695 1498 aa12.48□□□□□ -0.41
NDUFS3-203ENST00000525212 HRCP23327 699 aa12.47□□□□□ -0.41
NDUFS3-203ENST00000525212 WRNQ14191 1432 aaPredicted RBP eCLIP12.45□□□□□ -0.42
NDUFS3-203ENST00000525212 BIVM-ERCC5R4GMW8 1640 aa12.41□□□□□ -0.42
NDUFS3-203ENST00000525212 EHMT2Q96KQ7 1210 aa12.4□□□□□ -0.42
NDUFS3-203ENST00000525212 EEA1Q15075 1411 aa12.39□□□□□ -0.43
NDUFS3-203ENST00000525212 TOP2BQ02880 1626 aa12.39□□□□□ -0.43
NDUFS3-203ENST00000525212 TRIM26Q12899 539 aaPredicted RBP12.37□□□□□ -0.43
NDUFS3-203ENST00000525212 KIF21BO75037 1637 aa12.35□□□□□ -0.43
NDUFS3-203ENST00000525212 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
NDUFS3-203ENST00000525212 TNIKQ9UKE5 1360 aa12.33□□□□□ -0.44
NDUFS3-203ENST00000525212 CUX1P39880 1505 aa12.32□□□□□ -0.44
NDUFS3-203ENST00000525212 CEP162Q5TB80 1403 aa12.31□□□□□ -0.44
NDUFS3-203ENST00000525212 CFTRP13569 1480 aa12.31□□□□□ -0.44
NDUFS3-203ENST00000525212 GOLGA3Q08378 1498 aa12.3□□□□□ -0.44
NDUFS3-203ENST00000525212 CSRNP3Q8WYN3 585 aa12.29□□□□□ -0.44
NDUFS3-203ENST00000525212 CC2D2AQ9P2K1 1620 aa12.29□□□□□ -0.44
NDUFS3-203ENST00000525212 PPARGC1BQ86YN6 1023 aaKnown RBP12.25□□□□□ -0.45
NDUFS3-203ENST00000525212 CEP164Q9UPV0 1460 aa12.25□□□□□ -0.45
NDUFS3-203ENST00000525212 RAPGEF2Q9Y4G8 1499 aa12.22□□□□□ -0.45
NDUFS3-203ENST00000525212 PRXQ9BXM0 1461 aa12.18□□□□□ -0.46
NDUFS3-203ENST00000525212 ERICH3Q5RHP9 1530 aa12.16□□□□□ -0.46
NDUFS3-203ENST00000525212 CADPSQ9ULU8 1353 aa12.15□□□□□ -0.46
NDUFS3-203ENST00000525212 CLIP1P30622 1438 aa12.11□□□□□ -0.47
NDUFS3-203ENST00000525212 UBTFP17480 764 aaKnown RBP12.09□□□□□ -0.47
NDUFS3-203ENST00000525212 ARAP1Q96P48 1450 aa12.08□□□□□ -0.47
NDUFS3-203ENST00000525212 FGD5Q6ZNL6 1462 aa12.08□□□□□ -0.48
NDUFS3-203ENST00000525212 VPS8Q8N3P4 1428 aa12.07□□□□□ -0.48
NDUFS3-203ENST00000525212 NESP48681 1621 aa12.07□□□□□ -0.48
NDUFS3-203ENST00000525212 KIF27Q86VH2 1401 aa12.05□□□□□ -0.48
NDUFS3-203ENST00000525212 FANCD2Q9BXW9 1451 aa12.04□□□□□ -0.48
NDUFS3-203ENST00000525212 DNMBPQ6XZF7 1577 aa12.04□□□□□ -0.48
NDUFS3-203ENST00000525212 WDR97A6NE52 1622 aa12.03□□□□□ -0.48
NDUFS3-203ENST00000525212 CUX2O14529 1486 aa12.02□□□□□ -0.49
NDUFS3-203ENST00000525212 TOPBP1Q92547 1522 aa12□□□□□ -0.49
NDUFS3-203ENST00000525212 IGF1RP08069 1367 aa11.99□□□□□ -0.49
NDUFS3-203ENST00000525212 LAMC3Q9Y6N6 1575 aa11.98□□□□□ -0.49
NDUFS3-203ENST00000525212 ARHGAP35Q9NRY4 1499 aa11.98□□□□□ -0.49
NDUFS3-203ENST00000525212 DNAJC5BQ9UF47 199 aa11.98□□□□□ -0.49
NDUFS3-203ENST00000525212 URB2Q14146 1524 aaKnown RBP11.97□□□□□ -0.49
NDUFS3-203ENST00000525212 POLA1P09884 1462 aaPredicted RBP11.97□□□□□ -0.49
NDUFS3-203ENST00000525212 RAD54L2Q9Y4B4 1467 aa11.96□□□□□ -0.49
NDUFS3-203ENST00000525212 ABCA10Q8WWZ4 1543 aa11.96□□□□□ -0.5
NDUFS3-203ENST00000525212 TTBK1Q5TCY1 1321 aaPredicted RBP11.95□□□□□ -0.5
NDUFS3-203ENST00000525212 ZEB1P37275 1124 aaPredicted RBP11.94□□□□□ -0.5
NDUFS3-203ENST00000525212 KIF21AQ7Z4S6 1674 aa11.94□□□□□ -0.5
NDUFS3-203ENST00000525212 ABCA5Q8WWZ7 1642 aa11.91□□□□□ -0.5
NDUFS3-203ENST00000525212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.9□□□□□ -0.5
NDUFS3-203ENST00000525212 CARMIL1Q5VZK9 1371 aa11.89□□□□□ -0.51
NDUFS3-203ENST00000525212 CUL7Q14999 1698 aa11.87□□□□□ -0.51
NDUFS3-203ENST00000525212 TARBP1Q13395 1621 aaKnown RBP11.85□□□□□ -0.51
NDUFS3-203ENST00000525212 CTTNBP2Q8WZ74 1663 aa11.84□□□□□ -0.51
NDUFS3-203ENST00000525212 RANGAP1P46060 587 aaPredicted RBP11.84□□□□□ -0.51
NDUFS3-203ENST00000525212 KANK4Q5T7N3 995 aaPredicted RBP11.83□□□□□ -0.52
NDUFS3-203ENST00000525212 CFAP43Q8NDM7 1665 aa11.83□□□□□ -0.52
NDUFS3-203ENST00000525212 PCF11O94913 1555 aaKnown RBP11.82□□□□□ -0.52
NDUFS3-203ENST00000525212 TIAM1Q13009 1591 aa11.82□□□□□ -0.52
NDUFS3-203ENST00000525212 MAP3K1Q13233 1512 aa11.81□□□□□ -0.52
NDUFS3-203ENST00000525212 RRBP1Q9P2E9 1410 aaKnown RBP11.8□□□□□ -0.52
NDUFS3-203ENST00000525212 AEBP2Q6ZN18 517 aaPredicted RBP11.79□□□□□ -0.52
NDUFS3-203ENST00000525212 PDS5BQ9NTI5 1447 aa11.78□□□□□ -0.52
NDUFS3-203ENST00000525212 SAMD9Q5K651 1589 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms