RNA–Protein interactions for RNA: ENST00000507400.1

TUSC3-206, Transcript of tumor suppressor candidate 3, humanhuman

TSL 5

Gene TUSC3, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-206ENST00000507400 AEBP2Q6ZN18 517 aaPredicted RBP26.66■■□□□ 1.86
TUSC3-206ENST00000507400 CHIC1Q5VXU3 224 aa25.23■■□□□ 1.63
TUSC3-206ENST00000507400 SENP3Q9H4L4 574 aaPredicted RBP22.61■■□□□ 1.21
TUSC3-206ENST00000507400 PHF23Q9BUL5 403 aaPredicted RBP22.39■■□□□ 1.17
TUSC3-206ENST00000507400 FOXD1Q16676 465 aa21.16■□□□□ 0.98
TUSC3-206ENST00000507400 PLPPR3Q6T4P5 718 aa20.13■□□□□ 0.81
TUSC3-206ENST00000507400 PPP6R1Q9UPN7 881 aa19.85■□□□□ 0.77
TUSC3-206ENST00000507400 ADRA2BP18089 450 aa19.78■□□□□ 0.76
TUSC3-206ENST00000507400 PIAS4Q8N2W9 510 aaPredicted RBP19.76■□□□□ 0.75
TUSC3-206ENST00000507400 MSH5O43196 834 aa19.7■□□□□ 0.74
TUSC3-206ENST00000507400 POTEDQ86YR6 584 aa19.32■□□□□ 0.68
TUSC3-206ENST00000507400 MAPK8IP2Q13387 824 aaPredicted RBP18.19■□□□□ 0.5
TUSC3-206ENST00000507400 DMRT2Q9Y5R5 561 aa17.95■□□□□ 0.46
TUSC3-206ENST00000507400 SCAF1Q9H7N4 1312 aaKnown RBP17.93■□□□□ 0.46
TUSC3-206ENST00000507400 PPP4R3CPQ6ZMV5 832 aa17.69■□□□□ 0.42
TUSC3-206ENST00000507400 DCAF8L1A6NGE4 600 aa17.31■□□□□ 0.36
TUSC3-206ENST00000507400 CNKSR2Q8WXI2 1034 aa17.31■□□□□ 0.36
TUSC3-206ENST00000507400 HOXD11P31277 338 aaPredicted RBP17.27■□□□□ 0.36
TUSC3-206ENST00000507400 RNF216Q9NWF9 866 aaPredicted RBP17.14■□□□□ 0.33
TUSC3-206ENST00000507400 CACNB1Q02641 598 aaPredicted RBP16.98■□□□□ 0.31
TUSC3-206ENST00000507400 NCBP3Q53F19 620 aaKnown RBP16.94■□□□□ 0.3
TUSC3-206ENST00000507400 RNF39Q9H2S5 420 aa16.86■□□□□ 0.29
TUSC3-206ENST00000507400 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
TUSC3-206ENST00000507400 DNAJC5BQ9UF47 199 aa16.57■□□□□ 0.24
TUSC3-206ENST00000507400 C1QBPQ07021 282 aaKnown RBP16.56■□□□□ 0.24
TUSC3-206ENST00000507400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.52■□□□□ 0.24
TUSC3-206ENST00000507400 KCNA4P22459 653 aa16.51■□□□□ 0.23
TUSC3-206ENST00000507400 U3KPZ7 1027 aaPredicted RBP16.18■□□□□ 0.18
TUSC3-206ENST00000507400 SLC4A2P04920 1241 aa16.05■□□□□ 0.16
TUSC3-206ENST00000507400 SPINK5Q9NQ38 1064 aaPredicted RBP15.99■□□□□ 0.15
TUSC3-206ENST00000507400 CAPN15O75808 1086 aa15.93■□□□□ 0.14
TUSC3-206ENST00000507400 DSG3P32926 999 aa15.81■□□□□ 0.12
TUSC3-206ENST00000507400 TRHP20396 242 aaPredicted RBP15.69■□□□□ 0.1
TUSC3-206ENST00000507400 ABCB7O75027 752 aa15.62■□□□□ 0.09
TUSC3-206ENST00000507400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.59■□□□□ 0.09
TUSC3-206ENST00000507400 HNRNPUL2Q1KMD3 747 aaKnown RBP15.59■□□□□ 0.09
TUSC3-206ENST00000507400 APLP2Q06481 763 aa15.58■□□□□ 0.08
TUSC3-206ENST00000507400 ZNF219Q9P2Y4 722 aaPredicted RBP15.56■□□□□ 0.08
TUSC3-206ENST00000507400 SAMD1Q6SPF0 538 aaPredicted RBP15.54■□□□□ 0.08
TUSC3-206ENST00000507400 SLC4A1APQ9BWU0 796 aaKnown RBP15.54■□□□□ 0.08
TUSC3-206ENST00000507400 MYCNP04198 464 aaPredicted RBP15.46■□□□□ 0.07
TUSC3-206ENST00000507400 FOXD4L1Q9NU39 408 aa15.33■□□□□ 0.04
TUSC3-206ENST00000507400 POLA2Q14181 598 aa15.25■□□□□ 0.03
TUSC3-206ENST00000507400 ATF5Q9Y2D1 282 aaPredicted RBP15.24■□□□□ 0.03
TUSC3-206ENST00000507400 ZBTB22O15209 634 aa15.21■□□□□ 0.03
TUSC3-206ENST00000507400 POTEHQ6S545 545 aa15.13■□□□□ 0.01
TUSC3-206ENST00000507400 RBM42Q9BTD8 480 aaKnown RBP14.99□□□□□ -0.01
TUSC3-206ENST00000507400 ZBTB12Q9Y330 459 aaPredicted RBP14.82□□□□□ -0.04
TUSC3-206ENST00000507400 OSCARQ8IYS5 282 aa14.79□□□□□ -0.04
TUSC3-206ENST00000507400 ATXN8OSP0DMR3 200 aa14.78□□□□□ -0.04
TUSC3-206ENST00000507400 CHRDL2Q6WN34 429 aa14.75□□□□□ -0.05
TUSC3-206ENST00000507400 AKT1S1Q96B36 256 aa14.68□□□□□ -0.06
TUSC3-206ENST00000507400 REM2Q8IYK8 340 aaPredicted RBP14.6□□□□□ -0.07
TUSC3-206ENST00000507400 FBLN2P98095 1184 aa14.51□□□□□ -0.09
TUSC3-206ENST00000507400 MKRN4PQ13434 485 aaPredicted RBP14.5□□□□□ -0.09
TUSC3-206ENST00000507400 PITPNM1O00562 1244 aa14.47□□□□□ -0.09
TUSC3-206ENST00000507400 CSRNP3Q8WYN3 585 aa14.47□□□□□ -0.09
TUSC3-206ENST00000507400 PIP4P2Q8N4L2 257 aa14.42□□□□□ -0.1
TUSC3-206ENST00000507400 SPDYE2BA6NHP3 402 aa14.41□□□□□ -0.1
TUSC3-206ENST00000507400 SPDYE6P0CI01 402 aa14.41□□□□□ -0.1
TUSC3-206ENST00000507400 SPDYE2Q495Y8 402 aa14.41□□□□□ -0.1
TUSC3-206ENST00000507400 EHMT2Q96KQ7 1210 aa14.36□□□□□ -0.11
TUSC3-206ENST00000507400 FXR2P51116 673 aaKnown RBP eCLIP14.3□□□□□ -0.12
TUSC3-206ENST00000507400 ZNF692Q9BU19 519 aaPredicted RBP14.29□□□□□ -0.12
TUSC3-206ENST00000507400 SSUH2Q9Y2M2 353 aa14.24□□□□□ -0.13
TUSC3-206ENST00000507400 CLEC11AQ9Y240 323 aa14.22□□□□□ -0.13
TUSC3-206ENST00000507400 SP7Q8TDD2 431 aaPredicted RBP14.17□□□□□ -0.14
TUSC3-206ENST00000507400 HAX1O00165 279 aa14.16□□□□□ -0.14
TUSC3-206ENST00000507400 SPDYE1Q8NFV5 336 aaPredicted RBP14.16□□□□□ -0.14
TUSC3-206ENST00000507400 PABPN1Q86U42 306 aaKnown RBP eCLIP14.1□□□□□ -0.15
TUSC3-206ENST00000507400 PRKAR2AP13861 404 aaKnown RBP14.09□□□□□ -0.15
TUSC3-206ENST00000507400 EVX2Q03828 476 aa14.05□□□□□ -0.16
TUSC3-206ENST00000507400 CHADLQ6NUI6 762 aa14□□□□□ -0.17
TUSC3-206ENST00000507400 PRR29P0C7W0 189 aa13.94□□□□□ -0.18
TUSC3-206ENST00000507400 C19orf67A6NJJ6 358 aa13.84□□□□□ -0.19
TUSC3-206ENST00000507400 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
TUSC3-206ENST00000507400 FARP1Q9Y4F1 1045 aaPredicted RBP13.71□□□□□ -0.21
TUSC3-206ENST00000507400 GABBR2O75899 941 aa13.67□□□□□ -0.22
TUSC3-206ENST00000507400 CD44P16070 742 aaKnown RBP13.63□□□□□ -0.23
TUSC3-206ENST00000507400 CREBZFQ9NS37 354 aa13.63□□□□□ -0.23
TUSC3-206ENST00000507400 STAG3Q9UJ98 1225 aa13.61□□□□□ -0.23
TUSC3-206ENST00000507400 NISCHQ9Y2I1 1504 aa13.5□□□□□ -0.25
TUSC3-206ENST00000507400 ZRANB1Q9UGI0 708 aa13.46□□□□□ -0.25
TUSC3-206ENST00000507400 POTEIP0CG38 1075 aa13.41□□□□□ -0.26
TUSC3-206ENST00000507400 PROM2Q8N271 834 aa13.4□□□□□ -0.26
TUSC3-206ENST00000507400 MNX1P50219 401 aaPredicted RBP13.39□□□□□ -0.27
TUSC3-206ENST00000507400 ZNF579Q8NAF0 562 aaKnown RBP13.38□□□□□ -0.27
TUSC3-206ENST00000507400 PHF12Q96QT6 1004 aa13.31□□□□□ -0.28
TUSC3-206ENST00000507400 GALR2O43603 387 aaPredicted RBP13.3□□□□□ -0.28
TUSC3-206ENST00000507400 LHX8Q68G74 356 aa13.3□□□□□ -0.28
TUSC3-206ENST00000507400 NPM1P06748 294 aaKnown RBP eCLIP13.29□□□□□ -0.28
TUSC3-206ENST00000507400 DCBLD2Q96PD2 775 aa13.28□□□□□ -0.28
TUSC3-206ENST00000507400 PAK3O75914 559 aaPredicted RBP13.27□□□□□ -0.29
TUSC3-206ENST00000507400 CLCN6P51797 869 aa13.27□□□□□ -0.29
TUSC3-206ENST00000507400 TSPYL2Q9H2G4 693 aaPredicted RBP13.17□□□□□ -0.3
TUSC3-206ENST00000507400 MIER1Q8N108 512 aa13.16□□□□□ -0.3
TUSC3-206ENST00000507400 FKBP8Q14318 412 aa13.14□□□□□ -0.31
TUSC3-206ENST00000507400 MS4A3Q96HJ5 214 aa13.1□□□□□ -0.31
TUSC3-206ENST00000507400 PELP1Q8IZL8 1130 aaKnown RBP13.06□□□□□ -0.32
TUSC3-206ENST00000507400 PLEKHG5O94827 1062 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms