RNA–Protein interactions for RNA: ENST00000559074.5

SEMA4B-208, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 1,697 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-208ENST00000559074 NISCHQ9Y2I1 1504 aa35.8■■■■□ 3.32
SEMA4B-208ENST00000559074 CCDC180Q9P1Z9 1646 aa31.37■■■□□ 2.61
SEMA4B-208ENST00000559074 ZCCHC6Q5VYS8 1495 aaKnown RBP30.09■■■□□ 2.41
SEMA4B-208ENST00000559074 DCAF1Q9Y4B6 1507 aa29.65■■■□□ 2.34
SEMA4B-208ENST00000559074 ABCC9O60706 1549 aa29.61■■■□□ 2.33
SEMA4B-208ENST00000559074 DCAF8L2P0C7V8 631 aa29.41■■■□□ 2.3
SEMA4B-208ENST00000559074 MYO15BQ96JP2 1530 aa29.34■■■□□ 2.29
SEMA4B-208ENST00000559074 NACADO15069 1562 aa29.17■■■□□ 2.26
SEMA4B-208ENST00000559074 SHROOM4Q9ULL8 1493 aa29.03■■■□□ 2.24
SEMA4B-208ENST00000559074 RB1CC1Q8TDY2 1594 aa28.95■■■□□ 2.22
SEMA4B-208ENST00000559074 SCRIBQ14160 1630 aa28.76■■■□□ 2.19
SEMA4B-208ENST00000559074 UNC13AQ9UPW8 1703 aa28.41■■■□□ 2.14
SEMA4B-208ENST00000559074 BICRAQ9NZM4 1560 aa28.08■■■□□ 2.09
SEMA4B-208ENST00000559074 SUPT5HO00267 1087 aaKnown RBP27.84■■■□□ 2.05
SEMA4B-208ENST00000559074 PABPN1Q86U42 306 aaKnown RBP eCLIP27.83■■■□□ 2.05
SEMA4B-208ENST00000559074 CECR2Q9BXF3 1484 aa27.79■■■□□ 2.04
SEMA4B-208ENST00000559074 RSF1Q96T23 1441 aaPredicted RBP27.69■■■□□ 2.02
SEMA4B-208ENST00000559074 BAZ1AQ9NRL2 1556 aaPredicted RBP27.67■■■□□ 2.02
SEMA4B-208ENST00000559074 MROH2BQ7Z745 1585 aa27.64■■■□□ 2.02
SEMA4B-208ENST00000559074 SMARCA4P51532 1647 aa27.58■■■□□ 2.01
SEMA4B-208ENST00000559074 WIZO95785 1651 aa27.44■■□□□ 1.98
SEMA4B-208ENST00000559074 PEG3Q9GZU2 1588 aa27.27■■□□□ 1.96
SEMA4B-208ENST00000559074 EIF4G1Q04637 1599 aaKnown RBP27.24■■□□□ 1.95
SEMA4B-208ENST00000559074 TOP2AP11388 1531 aaKnown RBP27.17■■□□□ 1.94
SEMA4B-208ENST00000559074 SMARCA2P51531 1590 aa27.13■■□□□ 1.93
SEMA4B-208ENST00000559074 ATAD2BQ9ULI0 1458 aa27.1■■□□□ 1.93
SEMA4B-208ENST00000559074 BAZ1BQ9UIG0 1483 aaKnown RBP26.96■■□□□ 1.91
SEMA4B-208ENST00000559074 HMGXB3Q12766 1538 aa26.91■■□□□ 1.9
SEMA4B-208ENST00000559074 NCAPD3P42695 1498 aa26.89■■□□□ 1.89
SEMA4B-208ENST00000559074 CC2D2AQ9P2K1 1620 aa26.85■■□□□ 1.89
SEMA4B-208ENST00000559074 CCDC88BA6NC98 1476 aa26.83■■□□□ 1.88
SEMA4B-208ENST00000559074 CHIC1Q5VXU3 224 aa26.63■■□□□ 1.85
SEMA4B-208ENST00000559074 CFTRP13569 1480 aa26.27■■□□□ 1.8
SEMA4B-208ENST00000559074 ABCC8Q09428 1581 aa26.26■■□□□ 1.79
SEMA4B-208ENST00000559074 PRDM2Q13029 1718 aa26.25■■□□□ 1.79
SEMA4B-208ENST00000559074 TRIM41Q8WV44 630 aa26.2■■□□□ 1.78
SEMA4B-208ENST00000559074 CADPSQ9ULU8 1353 aa26.16■■□□□ 1.78
SEMA4B-208ENST00000559074 DNAJC5BQ9UF47 199 aa26.12■■□□□ 1.77
SEMA4B-208ENST00000559074 WRNQ14191 1432 aaPredicted RBP eCLIP26.08■■□□□ 1.77
SEMA4B-208ENST00000559074 LAMC3Q9Y6N6 1575 aa26.04■■□□□ 1.76
SEMA4B-208ENST00000559074 SYNJ1O43426 1573 aa26.03■■□□□ 1.76
SEMA4B-208ENST00000559074 NESP48681 1621 aa25.97■■□□□ 1.75
SEMA4B-208ENST00000559074 BIVM-ERCC5R4GMW8 1640 aa25.95■■□□□ 1.74
SEMA4B-208ENST00000559074 TOP2BQ02880 1626 aa25.94■■□□□ 1.74
SEMA4B-208ENST00000559074 FANCD2Q9BXW9 1451 aa25.9■■□□□ 1.74
SEMA4B-208ENST00000559074 CUX1P39880 1505 aa25.87■■□□□ 1.73
SEMA4B-208ENST00000559074 PDS5BQ9NTI5 1447 aa25.78■■□□□ 1.72
SEMA4B-208ENST00000559074 CEP164Q9UPV0 1460 aa25.77■■□□□ 1.72
SEMA4B-208ENST00000559074 KIF21AQ7Z4S6 1674 aa25.75■■□□□ 1.71
SEMA4B-208ENST00000559074 DNMBPQ6XZF7 1577 aa25.7■■□□□ 1.7
SEMA4B-208ENST00000559074 SOGA1O94964 1423 aa25.7■■□□□ 1.7
SEMA4B-208ENST00000559074 FAM9AQ8IZU1 332 aaPredicted RBP25.69■■□□□ 1.7
SEMA4B-208ENST00000559074 EEA1Q15075 1411 aa25.68■■□□□ 1.7
SEMA4B-208ENST00000559074 TOPBP1Q92547 1522 aa25.63■■□□□ 1.69
SEMA4B-208ENST00000559074 RUSC2Q8N2Y8 1516 aa25.61■■□□□ 1.69
SEMA4B-208ENST00000559074 URB2Q14146 1524 aaKnown RBP25.6■■□□□ 1.69
SEMA4B-208ENST00000559074 FGD5Q6ZNL6 1462 aa25.6■■□□□ 1.69
SEMA4B-208ENST00000559074 LOC105371045A0A1W2PR82 267 aa25.55■■□□□ 1.68
SEMA4B-208ENST00000559074 POLA1P09884 1462 aaPredicted RBP25.49■■□□□ 1.67
SEMA4B-208ENST00000559074 MRC2Q9UBG0 1479 aa25.49■■□□□ 1.67
SEMA4B-208ENST00000559074 CSRNP3Q8WYN3 585 aa25.45■■□□□ 1.67
SEMA4B-208ENST00000559074 KIF27Q86VH2 1401 aa25.42■■□□□ 1.66
SEMA4B-208ENST00000559074 ERCC6Q03468 1493 aa25.41■■□□□ 1.66
SEMA4B-208ENST00000559074 WDR97A6NE52 1622 aa25.39■■□□□ 1.66
SEMA4B-208ENST00000559074 KIF21BO75037 1637 aa25.39■■□□□ 1.66
SEMA4B-208ENST00000559074 WDR62O43379 1518 aa25.39■■□□□ 1.66
SEMA4B-208ENST00000559074 CUX2O14529 1486 aa25.39■■□□□ 1.66
SEMA4B-208ENST00000559074 ABCA10Q8WWZ4 1543 aa25.38■■□□□ 1.65
SEMA4B-208ENST00000559074 RAD54L2Q9Y4B4 1467 aa25.37■■□□□ 1.65
SEMA4B-208ENST00000559074 THOC2Q8NI27 1593 aaKnown RBP25.36■■□□□ 1.65
SEMA4B-208ENST00000559074 GOLGA3Q08378 1498 aa25.32■■□□□ 1.64
SEMA4B-208ENST00000559074 EHMT2Q96KQ7 1210 aa25.3■■□□□ 1.64
SEMA4B-208ENST00000559074 TARBP1Q13395 1621 aaKnown RBP25.28■■□□□ 1.64
SEMA4B-208ENST00000559074 PRXQ9BXM0 1461 aa25.25■■□□□ 1.63
SEMA4B-208ENST00000559074 ERICH3Q5RHP9 1530 aa25.23■■□□□ 1.63
SEMA4B-208ENST00000559074 ABCA5Q8WWZ7 1642 aa25.23■■□□□ 1.63
SEMA4B-208ENST00000559074 RAPGEF2Q9Y4G8 1499 aa25.2■■□□□ 1.62
SEMA4B-208ENST00000559074 TNIKQ9UKE5 1360 aa25.18■■□□□ 1.62
SEMA4B-208ENST00000559074 IGF1RP08069 1367 aa25.17■■□□□ 1.62
SEMA4B-208ENST00000559074 IFT140Q96RY7 1462 aa25.15■■□□□ 1.62
SEMA4B-208ENST00000559074 CUL7Q14999 1698 aa25.12■■□□□ 1.61
SEMA4B-208ENST00000559074 GAPVD1Q14C86 1478 aa25.11■■□□□ 1.61
SEMA4B-208ENST00000559074 UBTFP17480 764 aaKnown RBP25.1■■□□□ 1.61
SEMA4B-208ENST00000559074 TDRD9Q8NDG6 1382 aaKnown RBP25.09■■□□□ 1.61
SEMA4B-208ENST00000559074 PBRM1Q86U86 1689 aa25.07■■□□□ 1.6
SEMA4B-208ENST00000559074 CARMIL1Q5VZK9 1371 aa25.05■■□□□ 1.6
SEMA4B-208ENST00000559074 CEP162Q5TB80 1403 aa25.05■■□□□ 1.6
SEMA4B-208ENST00000559074 ZNF608Q9ULD9 1512 aaPredicted RBP24.99■■□□□ 1.59
SEMA4B-208ENST00000559074 EIF4G3O43432 1585 aaKnown RBP24.99■■□□□ 1.59
SEMA4B-208ENST00000559074 AQRO60306 1485 aaKnown RBP eCLIP24.97■■□□□ 1.593e-7■■■■■ 33.3
SEMA4B-208ENST00000559074 GRIN2BQ13224 1484 aa24.94■■□□□ 1.58
SEMA4B-208ENST00000559074 ADAMTS12P58397 1594 aa24.91■■□□□ 1.58
SEMA4B-208ENST00000559074 CLIP1P30622 1438 aa24.87■■□□□ 1.57
SEMA4B-208ENST00000559074 CTTNBP2Q8WZ74 1663 aa24.85■■□□□ 1.57
SEMA4B-208ENST00000559074 FHAD1B1AJZ9 1412 aa24.84■■□□□ 1.57
SEMA4B-208ENST00000559074 SNAPC4Q5SXM2 1469 aa24.79■■□□□ 1.56
SEMA4B-208ENST00000559074 MAGI1Q96QZ7 1491 aaPredicted RBP24.76■■□□□ 1.55
SEMA4B-208ENST00000559074 ARAP1Q96P48 1450 aa24.69■■□□□ 1.54
SEMA4B-208ENST00000559074 ARHGAP35Q9NRY4 1499 aa24.69■■□□□ 1.54
SEMA4B-208ENST00000559074 RANGAP1P46060 587 aaPredicted RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms