RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 NISCHQ9Y2I1 1504 aa34.37■■■■□ 3.09
PSMC3-213ENST00000619920 CCDC180Q9P1Z9 1646 aa29.9■■■□□ 2.38
PSMC3-213ENST00000619920 ZCCHC6Q5VYS8 1495 aaKnown RBP28.89■■■□□ 2.22
PSMC3-213ENST00000619920 DCAF1Q9Y4B6 1507 aa28.47■■■□□ 2.15
PSMC3-213ENST00000619920 DCAF8L2P0C7V8 631 aa28.28■■■□□ 2.12
PSMC3-213ENST00000619920 MYO15BQ96JP2 1530 aa28.09■■■□□ 2.09
PSMC3-213ENST00000619920 ABCC9O60706 1549 aa28.09■■■□□ 2.09
PSMC3-213ENST00000619920 SHROOM4Q9ULL8 1493 aa28.05■■■□□ 2.08
PSMC3-213ENST00000619920 NACADO15069 1562 aa27.84■■■□□ 2.05
PSMC3-213ENST00000619920 RB1CC1Q8TDY2 1594 aa27.54■■■□□ 2
PSMC3-213ENST00000619920 SCRIBQ14160 1630 aa27.45■■□□□ 1.99
PSMC3-213ENST00000619920 SUPT5HO00267 1087 aaKnown RBP27.1■■□□□ 1.93
PSMC3-213ENST00000619920 UNC13AQ9UPW8 1703 aa26.91■■□□□ 1.9
PSMC3-213ENST00000619920 RSF1Q96T23 1441 aaPredicted RBP26.72■■□□□ 1.87
PSMC3-213ENST00000619920 BICRAQ9NZM4 1560 aa26.69■■□□□ 1.86
PSMC3-213ENST00000619920 CECR2Q9BXF3 1484 aa26.65■■□□□ 1.86
PSMC3-213ENST00000619920 PABPN1Q86U42 306 aaKnown RBP eCLIP26.53■■□□□ 1.84
PSMC3-213ENST00000619920 MROH2BQ7Z745 1585 aa26.53■■□□□ 1.84
PSMC3-213ENST00000619920 BAZ1AQ9NRL2 1556 aaPredicted RBP26.53■■□□□ 1.84
PSMC3-213ENST00000619920 SMARCA4P51532 1647 aa26.37■■□□□ 1.81
PSMC3-213ENST00000619920 WIZO95785 1651 aa26.29■■□□□ 1.8
PSMC3-213ENST00000619920 PEG3Q9GZU2 1588 aa26.08■■□□□ 1.76
PSMC3-213ENST00000619920 TOP2AP11388 1531 aaKnown RBP26.07■■□□□ 1.76
PSMC3-213ENST00000619920 CHIC1Q5VXU3 224 aa26.07■■□□□ 1.76
PSMC3-213ENST00000619920 SMARCA2P51531 1590 aa25.92■■□□□ 1.74
PSMC3-213ENST00000619920 ATAD2BQ9ULI0 1458 aa25.92■■□□□ 1.74
PSMC3-213ENST00000619920 EIF4G1Q04637 1599 aaKnown RBP25.87■■□□□ 1.73
PSMC3-213ENST00000619920 CCDC88BA6NC98 1476 aa25.81■■□□□ 1.72
PSMC3-213ENST00000619920 BAZ1BQ9UIG0 1483 aaKnown RBP25.77■■□□□ 1.72
PSMC3-213ENST00000619920 NCAPD3P42695 1498 aa25.7■■□□□ 1.71
PSMC3-213ENST00000619920 HMGXB3Q12766 1538 aa25.66■■□□□ 1.7
PSMC3-213ENST00000619920 TRIM41Q8WV44 630 aa25.52■■□□□ 1.68
PSMC3-213ENST00000619920 CC2D2AQ9P2K1 1620 aa25.43■■□□□ 1.66
PSMC3-213ENST00000619920 ABCC8Q09428 1581 aa25.26■■□□□ 1.63
PSMC3-213ENST00000619920 CFTRP13569 1480 aa25.16■■□□□ 1.62
PSMC3-213ENST00000619920 WRNQ14191 1432 aaPredicted RBP eCLIP25.15■■□□□ 1.62
PSMC3-213ENST00000619920 CADPSQ9ULU8 1353 aa25.05■■□□□ 1.6
PSMC3-213ENST00000619920 LOC105371045A0A1W2PR82 267 aa25.04■■□□□ 1.6
PSMC3-213ENST00000619920 FAM9AQ8IZU1 332 aaPredicted RBP24.99■■□□□ 1.59
PSMC3-213ENST00000619920 SYNJ1O43426 1573 aa24.99■■□□□ 1.59
PSMC3-213ENST00000619920 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
PSMC3-213ENST00000619920 EEA1Q15075 1411 aa24.92■■□□□ 1.58
PSMC3-213ENST00000619920 TOP2BQ02880 1626 aa24.91■■□□□ 1.58
PSMC3-213ENST00000619920 BIVM-ERCC5R4GMW8 1640 aa24.87■■□□□ 1.57
PSMC3-213ENST00000619920 SOGA1O94964 1423 aa24.85■■□□□ 1.57
PSMC3-213ENST00000619920 CUX1P39880 1505 aa24.8■■□□□ 1.56
PSMC3-213ENST00000619920 LAMC3Q9Y6N6 1575 aa24.78■■□□□ 1.56
PSMC3-213ENST00000619920 CSRNP3Q8WYN3 585 aa24.74■■□□□ 1.55
PSMC3-213ENST00000619920 FANCD2Q9BXW9 1451 aa24.74■■□□□ 1.55
PSMC3-213ENST00000619920 RUSC2Q8N2Y8 1516 aa24.72■■□□□ 1.55
PSMC3-213ENST00000619920 DNAJC5BQ9UF47 199 aa24.71■■□□□ 1.55
PSMC3-213ENST00000619920 NESP48681 1621 aa24.7■■□□□ 1.54
PSMC3-213ENST00000619920 PDS5BQ9NTI5 1447 aa24.6■■□□□ 1.53
PSMC3-213ENST00000619920 EHMT2Q96KQ7 1210 aa24.57■■□□□ 1.52
PSMC3-213ENST00000619920 CEP164Q9UPV0 1460 aa24.56■■□□□ 1.52
PSMC3-213ENST00000619920 DNMBPQ6XZF7 1577 aa24.55■■□□□ 1.52
PSMC3-213ENST00000619920 GOLGA3Q08378 1498 aa24.53■■□□□ 1.52
PSMC3-213ENST00000619920 KIF21BO75037 1637 aa24.53■■□□□ 1.52
PSMC3-213ENST00000619920 KIF27Q86VH2 1401 aa24.52■■□□□ 1.52
PSMC3-213ENST00000619920 TNIKQ9UKE5 1360 aa24.51■■□□□ 1.51
PSMC3-213ENST00000619920 FGD5Q6ZNL6 1462 aa24.51■■□□□ 1.51
PSMC3-213ENST00000619920 TOPBP1Q92547 1522 aa24.49■■□□□ 1.51
PSMC3-213ENST00000619920 URB2Q14146 1524 aaKnown RBP24.41■■□□□ 1.5
PSMC3-213ENST00000619920 UBTFP17480 764 aaKnown RBP24.41■■□□□ 1.5
PSMC3-213ENST00000619920 KIF21AQ7Z4S6 1674 aa24.39■■□□□ 1.49
PSMC3-213ENST00000619920 CUX2O14529 1486 aa24.39■■□□□ 1.49
PSMC3-213ENST00000619920 PRXQ9BXM0 1461 aa24.39■■□□□ 1.49
PSMC3-213ENST00000619920 POLA1P09884 1462 aaPredicted RBP24.37■■□□□ 1.49
PSMC3-213ENST00000619920 ERICH3Q5RHP9 1530 aa24.36■■□□□ 1.49
PSMC3-213ENST00000619920 CEP162Q5TB80 1403 aa24.34■■□□□ 1.49
PSMC3-213ENST00000619920 RAPGEF2Q9Y4G8 1499 aa24.34■■□□□ 1.49
PSMC3-213ENST00000619920 ABCA10Q8WWZ4 1543 aa24.33■■□□□ 1.49
PSMC3-213ENST00000619920 IGF1RP08069 1367 aa24.28■■□□□ 1.48
PSMC3-213ENST00000619920 RAD54L2Q9Y4B4 1467 aa24.28■■□□□ 1.48
PSMC3-213ENST00000619920 MRC2Q9UBG0 1479 aa24.25■■□□□ 1.47
PSMC3-213ENST00000619920 WDR97A6NE52 1622 aa24.18■■□□□ 1.46
PSMC3-213ENST00000619920 CARMIL1Q5VZK9 1371 aa24.16■■□□□ 1.46
PSMC3-213ENST00000619920 CLIP1P30622 1438 aa24.14■■□□□ 1.46
PSMC3-213ENST00000619920 WDR62O43379 1518 aa24.12■■□□□ 1.45
PSMC3-213ENST00000619920 TARBP1Q13395 1621 aaKnown RBP24.1■■□□□ 1.45
PSMC3-213ENST00000619920 ERCC6Q03468 1493 aa24.09■■□□□ 1.45
PSMC3-213ENST00000619920 ABCA5Q8WWZ7 1642 aa24.08■■□□□ 1.45
PSMC3-213ENST00000619920 TRIM26Q12899 539 aaPredicted RBP24.08■■□□□ 1.44
PSMC3-213ENST00000619920 CUL7Q14999 1698 aa24.06■■□□□ 1.44
PSMC3-213ENST00000619920 GAPVD1Q14C86 1478 aa24.05■■□□□ 1.44
PSMC3-213ENST00000619920 TDRD9Q8NDG6 1382 aaKnown RBP24.04■■□□□ 1.44
PSMC3-213ENST00000619920 PCGF6Q9BYE7 350 aa24.04■■□□□ 1.44
PSMC3-213ENST00000619920 IFT140Q96RY7 1462 aa24■■□□□ 1.43
PSMC3-213ENST00000619920 THOC2Q8NI27 1593 aaKnown RBP23.97■■□□□ 1.43
PSMC3-213ENST00000619920 VPS8Q8N3P4 1428 aa23.95■■□□□ 1.43
PSMC3-213ENST00000619920 RANGAP1P46060 587 aaPredicted RBP23.88■■□□□ 1.41
PSMC3-213ENST00000619920 AQRO60306 1485 aaKnown RBP eCLIP23.86■■□□□ 1.411e-6■■■■□ 20.4
PSMC3-213ENST00000619920 ARAP1Q96P48 1450 aa23.86■■□□□ 1.41
PSMC3-213ENST00000619920 GRIN2BQ13224 1484 aa23.85■■□□□ 1.41
PSMC3-213ENST00000619920 PBRM1Q86U86 1689 aa23.85■■□□□ 1.41
PSMC3-213ENST00000619920 ARHGAP35Q9NRY4 1499 aa23.84■■□□□ 1.41
PSMC3-213ENST00000619920 FHAD1B1AJZ9 1412 aa23.82■■□□□ 1.4
PSMC3-213ENST00000619920 ZNF608Q9ULD9 1512 aaPredicted RBP23.8■■□□□ 1.4
PSMC3-213ENST00000619920 PPARGC1BQ86YN6 1023 aaKnown RBP23.8■■□□□ 1.4
PSMC3-213ENST00000619920 CTTNBP2Q8WZ74 1663 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms