RNA–Protein interactions for RNA: ENST00000533051.5

SLC43A3-222, Transcript of solute carrier family 43 member 3, humanhuman

TSL 2

Gene SLC43A3, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-222ENST00000533051 NISCHQ9Y2I1 1504 aa35.61■■■■□ 3.29
SLC43A3-222ENST00000533051 ABCC9O60706 1549 aa33.58■■■□□ 2.97
SLC43A3-222ENST00000533051 CCDC180Q9P1Z9 1646 aa32.53■■■□□ 2.8
SLC43A3-222ENST00000533051 DNAJC5BQ9UF47 199 aa32.4■■■□□ 2.78
SLC43A3-222ENST00000533051 RB1CC1Q8TDY2 1594 aa31.47■■■□□ 2.63
SLC43A3-222ENST00000533051 PABPN1Q86U42 306 aaKnown RBP eCLIP31.02■■■□□ 2.56
SLC43A3-222ENST00000533051 NACADO15069 1562 aa30.94■■■□□ 2.54
SLC43A3-222ENST00000533051 UNC13AQ9UPW8 1703 aa30.89■■■□□ 2.54
SLC43A3-222ENST00000533051 BICRAQ9NZM4 1560 aa30.61■■■□□ 2.49
SLC43A3-222ENST00000533051 DNAJC5Q9H3Z4 198 aa30.54■■■□□ 2.48
SLC43A3-222ENST00000533051 DCAF8L2P0C7V8 631 aa30.49■■■□□ 2.47
SLC43A3-222ENST00000533051 CECR2Q9BXF3 1484 aa30.33■■■□□ 2.45
SLC43A3-222ENST00000533051 CC2D2AQ9P2K1 1620 aa30.3■■■□□ 2.44
SLC43A3-222ENST00000533051 MYO15BQ96JP2 1530 aa30.08■■■□□ 2.41
SLC43A3-222ENST00000533051 SHROOM4Q9ULL8 1493 aa30■■■□□ 2.39
SLC43A3-222ENST00000533051 EIF4G1Q04637 1599 aaKnown RBP29.94■■■□□ 2.38
SLC43A3-222ENST00000533051 SCRIBQ14160 1630 aa29.6■■■□□ 2.33
SLC43A3-222ENST00000533051 CUX2O14529 1486 aa29.36■■■□□ 2.29
SLC43A3-222ENST00000533051 DCAF1Q9Y4B6 1507 aa29.31■■■□□ 2.28
SLC43A3-222ENST00000533051 ZCCHC6Q5VYS8 1495 aaKnown RBP29.29■■■□□ 2.28
SLC43A3-222ENST00000533051 ERCC6Q03468 1493 aa29.06■■■□□ 2.24
SLC43A3-222ENST00000533051 TRIM41Q8WV44 630 aa28.83■■■□□ 2.21
SLC43A3-222ENST00000533051 NESP48681 1621 aa28.54■■■□□ 2.16
SLC43A3-222ENST00000533051 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
SLC43A3-222ENST00000533051 THOC2Q8NI27 1593 aaKnown RBP28.52■■■□□ 2.16
SLC43A3-222ENST00000533051 ATAD2BQ9ULI0 1458 aa28.32■■■□□ 2.12
SLC43A3-222ENST00000533051 SMARCA2P51531 1590 aa28.29■■■□□ 2.12
SLC43A3-222ENST00000533051 HMGXB3Q12766 1538 aa28.28■■■□□ 2.12
SLC43A3-222ENST00000533051 KIF21AQ7Z4S6 1674 aa28.23■■■□□ 2.11
SLC43A3-222ENST00000533051 LAMC3Q9Y6N6 1575 aa28.14■■■□□ 2.1
SLC43A3-222ENST00000533051 SMARCA4P51532 1647 aa28.08■■■□□ 2.09
SLC43A3-222ENST00000533051 BAZ1AQ9NRL2 1556 aaPredicted RBP28.02■■■□□ 2.08
SLC43A3-222ENST00000533051 BAZ1BQ9UIG0 1483 aaKnown RBP28.02■■■□□ 2.08
SLC43A3-222ENST00000533051 PDS5BQ9NTI5 1447 aa27.94■■■□□ 2.06
SLC43A3-222ENST00000533051 MRC2Q9UBG0 1479 aa27.83■■■□□ 2.05
SLC43A3-222ENST00000533051 WDR62O43379 1518 aa27.82■■■□□ 2.04
SLC43A3-222ENST00000533051 PEG3Q9GZU2 1588 aa27.76■■■□□ 2.03
SLC43A3-222ENST00000533051 OSCARQ8IYS5 282 aa27.74■■■□□ 2.03
SLC43A3-222ENST00000533051 RIMBP3CA6NJZ7 1639 aa27.69■■■□□ 2.02
SLC43A3-222ENST00000533051 RIMBP3BA6NNM3 1639 aa27.69■■■□□ 2.02
SLC43A3-222ENST00000533051 RIMBP3Q9UFD9 1639 aa27.69■■■□□ 2.02
SLC43A3-222ENST00000533051 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
SLC43A3-222ENST00000533051 CEP164Q9UPV0 1460 aa27.51■■□□□ 1.99
SLC43A3-222ENST00000533051 MROH2BQ7Z745 1585 aa27.45■■□□□ 1.99
SLC43A3-222ENST00000533051 ARHGEF11O15085 1522 aa27.43■■□□□ 1.98
SLC43A3-222ENST00000533051 FANCD2Q9BXW9 1451 aa27.36■■□□□ 1.97
SLC43A3-222ENST00000533051 AEBP2Q6ZN18 517 aaPredicted RBP27.33■■□□□ 1.97
SLC43A3-222ENST00000533051 TRHP20396 242 aaPredicted RBP27.3■■□□□ 1.96
SLC43A3-222ENST00000533051 URB2Q14146 1524 aaKnown RBP27.22■■□□□ 1.95
SLC43A3-222ENST00000533051 CYB5RLQ6IPT4 315 aa27.21■■□□□ 1.95
SLC43A3-222ENST00000533051 WIZO95785 1651 aa27.13■■□□□ 1.93
SLC43A3-222ENST00000533051 ARAP1Q96P48 1450 aa27.08■■□□□ 1.93
SLC43A3-222ENST00000533051 CFTRP13569 1480 aa27.07■■□□□ 1.92
SLC43A3-222ENST00000533051 ZNF608Q9ULD9 1512 aaPredicted RBP27.07■■□□□ 1.92
SLC43A3-222ENST00000533051 CHD1O14646 1710 aa26.99■■□□□ 1.91
SLC43A3-222ENST00000533051 IFT140Q96RY7 1462 aa26.96■■□□□ 1.91
SLC43A3-222ENST00000533051 EIF4G3O43432 1585 aaKnown RBP26.93■■□□□ 1.9
SLC43A3-222ENST00000533051 PRDM2Q13029 1718 aa26.9■■□□□ 1.9
SLC43A3-222ENST00000533051 RSF1Q96T23 1441 aaPredicted RBP26.83■■□□□ 1.89
SLC43A3-222ENST00000533051 TOPBP1Q92547 1522 aa26.72■■□□□ 1.87
SLC43A3-222ENST00000533051 FBLN2P98095 1184 aa26.68■■□□□ 1.86
SLC43A3-222ENST00000533051 TOP2AP11388 1531 aaKnown RBP26.66■■□□□ 1.86
SLC43A3-222ENST00000533051 AQRO60306 1485 aaKnown RBP eCLIP26.65■■□□□ 1.864e-10■■■■■ 37.7
SLC43A3-222ENST00000533051 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
SLC43A3-222ENST00000533051 CLASP1Q7Z460 1538 aa26.56■■□□□ 1.84
SLC43A3-222ENST00000533051 DNMBPQ6XZF7 1577 aa26.54■■□□□ 1.84
SLC43A3-222ENST00000533051 ABCC8Q09428 1581 aa26.52■■□□□ 1.84
SLC43A3-222ENST00000533051 SYNJ1O43426 1573 aa26.44■■□□□ 1.82
SLC43A3-222ENST00000533051 SNAPC4Q5SXM2 1469 aa26.39■■□□□ 1.82
SLC43A3-222ENST00000533051 POLA1P09884 1462 aaPredicted RBP26.36■■□□□ 1.81
SLC43A3-222ENST00000533051 ILDR1Q86SU0 546 aaPredicted RBP26.33■■□□□ 1.81
SLC43A3-222ENST00000533051 GAPVD1Q14C86 1478 aa26.33■■□□□ 1.81
SLC43A3-222ENST00000533051 CCDC88BA6NC98 1476 aa26.32■■□□□ 1.8
SLC43A3-222ENST00000533051 RAD54L2Q9Y4B4 1467 aa26.3■■□□□ 1.8
SLC43A3-222ENST00000533051 TDRD9Q8NDG6 1382 aaKnown RBP26.29■■□□□ 1.8
SLC43A3-222ENST00000533051 CHMP7Q8WUX9 453 aaPredicted RBP26.26■■□□□ 1.79
SLC43A3-222ENST00000533051 MAGI1Q96QZ7 1491 aaPredicted RBP26.23■■□□□ 1.79
SLC43A3-222ENST00000533051 WDR97A6NE52 1622 aa26.22■■□□□ 1.79
SLC43A3-222ENST00000533051 SOGA1O94964 1423 aa26.18■■□□□ 1.78
SLC43A3-222ENST00000533051 KIF13AQ9H1H9 1805 aa26.17■■□□□ 1.78
SLC43A3-222ENST00000533051 SYNJ2O15056 1496 aa26.17■■□□□ 1.78
SLC43A3-222ENST00000533051 GRIN2BQ13224 1484 aa26.11■■□□□ 1.77
SLC43A3-222ENST00000533051 ERCC6L2Q5T890 1561 aa26.1■■□□□ 1.77
SLC43A3-222ENST00000533051 PBRM1Q86U86 1689 aa26.08■■□□□ 1.77
SLC43A3-222ENST00000533051 FGD5Q6ZNL6 1462 aa26.06■■□□□ 1.76
SLC43A3-222ENST00000533051 KDM4FA0A1W2PPD8 638 aa25.94■■□□□ 1.74
SLC43A3-222ENST00000533051 CEP170Q5SW79 1584 aa25.92■■□□□ 1.74
SLC43A3-222ENST00000533051 CUX1P39880 1505 aa25.87■■□□□ 1.73
SLC43A3-222ENST00000533051 KDM6BO15054 1643 aa25.81■■□□□ 1.72
SLC43A3-222ENST00000533051 SHROOM2Q13796 1616 aa25.81■■□□□ 1.72
SLC43A3-222ENST00000533051 ABCA5Q8WWZ7 1642 aa25.81■■□□□ 1.72
SLC43A3-222ENST00000533051 GRIN2AQ12879 1464 aa25.8■■□□□ 1.72
SLC43A3-222ENST00000533051 ABCC10Q5T3U5 1492 aa25.74■■□□□ 1.71
SLC43A3-222ENST00000533051 FAM69CQ0P6D2 419 aa25.74■■□□□ 1.71
SLC43A3-222ENST00000533051 DIP2BQ9P265 1576 aa25.73■■□□□ 1.71
SLC43A3-222ENST00000533051 NUP160Q12769 1436 aa25.72■■□□□ 1.71
SLC43A3-222ENST00000533051 ADAMTS12P58397 1594 aa25.71■■□□□ 1.71
SLC43A3-222ENST00000533051 TSPOAP1O95153 1857 aa25.68■■□□□ 1.7
SLC43A3-222ENST00000533051 ABCA10Q8WWZ4 1543 aa25.66■■□□□ 1.7
SLC43A3-222ENST00000533051 MAPKBP1O60336 1514 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms