RNA–Protein interactions for RNA: ENST00000554683.1

CNIH1-204, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 3

Gene CNIH1, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-204ENST00000554683 NISCHQ9Y2I1 1504 aa26.07■■□□□ 1.76
CNIH1-204ENST00000554683 AEBP2Q6ZN18 517 aaPredicted RBP25.26■■□□□ 1.63
CNIH1-204ENST00000554683 CHIC1Q5VXU3 224 aa24.7■■□□□ 1.54
CNIH1-204ENST00000554683 CCDC180Q9P1Z9 1646 aa23.23■■□□□ 1.31
CNIH1-204ENST00000554683 ABCC9O60706 1549 aa22.46■■□□□ 1.19
CNIH1-204ENST00000554683 ZCCHC6Q5VYS8 1495 aaKnown RBP21.8■■□□□ 1.08
CNIH1-204ENST00000554683 NACADO15069 1562 aa21.73■■□□□ 1.07
CNIH1-204ENST00000554683 RB1CC1Q8TDY2 1594 aa21.72■■□□□ 1.07
CNIH1-204ENST00000554683 MYO15BQ96JP2 1530 aa21.66■■□□□ 1.06
CNIH1-204ENST00000554683 PHF23Q9BUL5 403 aaPredicted RBP21.66■■□□□ 1.06
CNIH1-204ENST00000554683 DCAF1Q9Y4B6 1507 aa21.62■■□□□ 1.05
CNIH1-204ENST00000554683 SENP3Q9H4L4 574 aaPredicted RBP21.57■■□□□ 1.04
CNIH1-204ENST00000554683 DCAF8L2P0C7V8 631 aa21.47■■□□□ 1.03
CNIH1-204ENST00000554683 UNC13AQ9UPW8 1703 aa21.35■■□□□ 1.01
CNIH1-204ENST00000554683 SCRIBQ14160 1630 aa21.15■□□□□ 0.98
CNIH1-204ENST00000554683 BICRAQ9NZM4 1560 aa21.1■□□□□ 0.97
CNIH1-204ENST00000554683 PABPN1Q86U42 306 aaKnown RBP eCLIP20.91■□□□□ 0.94
CNIH1-204ENST00000554683 SHROOM4Q9ULL8 1493 aa20.9■□□□□ 0.94
CNIH1-204ENST00000554683 EIF4G1Q04637 1599 aaKnown RBP20.51■□□□□ 0.87
CNIH1-204ENST00000554683 DNAJC5BQ9UF47 199 aa20.41■□□□□ 0.86
CNIH1-204ENST00000554683 CC2D2AQ9P2K1 1620 aa20.39■□□□□ 0.86
CNIH1-204ENST00000554683 CECR2Q9BXF3 1484 aa20.27■□□□□ 0.84
CNIH1-204ENST00000554683 SMARCA4P51532 1647 aa20.26■□□□□ 0.83
CNIH1-204ENST00000554683 BAZ1AQ9NRL2 1556 aaPredicted RBP20.21■□□□□ 0.83
CNIH1-204ENST00000554683 PLPPR3Q6T4P5 718 aa20.1■□□□□ 0.81
CNIH1-204ENST00000554683 MROH2BQ7Z745 1585 aa20.09■□□□□ 0.81
CNIH1-204ENST00000554683 PEG3Q9GZU2 1588 aa20.08■□□□□ 0.8
CNIH1-204ENST00000554683 SMARCA2P51531 1590 aa20.06■□□□□ 0.8
CNIH1-204ENST00000554683 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
CNIH1-204ENST00000554683 NCAPD3P42695 1498 aa20■□□□□ 0.79
CNIH1-204ENST00000554683 HMGXB3Q12766 1538 aa20■□□□□ 0.79
CNIH1-204ENST00000554683 FOXD1Q16676 465 aa19.95■□□□□ 0.78
CNIH1-204ENST00000554683 WIZO95785 1651 aa19.92■□□□□ 0.78
CNIH1-204ENST00000554683 BAZ1BQ9UIG0 1483 aaKnown RBP19.89■□□□□ 0.77
CNIH1-204ENST00000554683 RSF1Q96T23 1441 aaPredicted RBP19.87■□□□□ 0.77
CNIH1-204ENST00000554683 TOP2AP11388 1531 aaKnown RBP19.72■□□□□ 0.75
CNIH1-204ENST00000554683 LAMC3Q9Y6N6 1575 aa19.51■□□□□ 0.71
CNIH1-204ENST00000554683 NESP48681 1621 aa19.5■□□□□ 0.71
CNIH1-204ENST00000554683 CCDC88BA6NC98 1476 aa19.41■□□□□ 0.7
CNIH1-204ENST00000554683 PRDM2Q13029 1718 aa19.39■□□□□ 0.69
CNIH1-204ENST00000554683 CADPSQ9ULU8 1353 aa19.38■□□□□ 0.69
CNIH1-204ENST00000554683 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
CNIH1-204ENST00000554683 CFTRP13569 1480 aa19.35■□□□□ 0.69
CNIH1-204ENST00000554683 ERCC6Q03468 1493 aa19.34■□□□□ 0.69
CNIH1-204ENST00000554683 SUPT5HO00267 1087 aaKnown RBP19.31■□□□□ 0.68
CNIH1-204ENST00000554683 THOC2Q8NI27 1593 aaKnown RBP19.28■□□□□ 0.68
CNIH1-204ENST00000554683 PDS5BQ9NTI5 1447 aa19.28■□□□□ 0.68
CNIH1-204ENST00000554683 FANCD2Q9BXW9 1451 aa19.21■□□□□ 0.67
CNIH1-204ENST00000554683 CEP164Q9UPV0 1460 aa19.19■□□□□ 0.66
CNIH1-204ENST00000554683 ADRA2BP18089 450 aa19.17■□□□□ 0.66
CNIH1-204ENST00000554683 CUX2O14529 1486 aa19.15■□□□□ 0.66
CNIH1-204ENST00000554683 PPP6R1Q9UPN7 881 aa19.14■□□□□ 0.65
CNIH1-204ENST00000554683 MRC2Q9UBG0 1479 aa19.14■□□□□ 0.65
CNIH1-204ENST00000554683 WDR62O43379 1518 aa19.13■□□□□ 0.65
CNIH1-204ENST00000554683 URB2Q14146 1524 aaKnown RBP19.04■□□□□ 0.64
CNIH1-204ENST00000554683 DNMBPQ6XZF7 1577 aa18.96■□□□□ 0.63
CNIH1-204ENST00000554683 TOPBP1Q92547 1522 aa18.94■□□□□ 0.62
CNIH1-204ENST00000554683 ABCC8Q09428 1581 aa18.9■□□□□ 0.62
CNIH1-204ENST00000554683 PIAS4Q8N2W9 510 aaPredicted RBP18.88■□□□□ 0.61
CNIH1-204ENST00000554683 CUX1P39880 1505 aa18.87■□□□□ 0.61
CNIH1-204ENST00000554683 POLA1P09884 1462 aaPredicted RBP18.79■□□□□ 0.6
CNIH1-204ENST00000554683 BIVM-ERCC5R4GMW8 1640 aa18.79■□□□□ 0.6
CNIH1-204ENST00000554683 TARBP1Q13395 1621 aaKnown RBP18.78■□□□□ 0.6
CNIH1-204ENST00000554683 IFT140Q96RY7 1462 aa18.77■□□□□ 0.59
CNIH1-204ENST00000554683 SYNJ1O43426 1573 aa18.76■□□□□ 0.59
CNIH1-204ENST00000554683 FGD5Q6ZNL6 1462 aa18.76■□□□□ 0.59
CNIH1-204ENST00000554683 TOP2BQ02880 1626 aa18.75■□□□□ 0.59
CNIH1-204ENST00000554683 WDR97A6NE52 1622 aa18.73■□□□□ 0.59
CNIH1-204ENST00000554683 WRNQ14191 1432 aaPredicted RBP eCLIP18.73■□□□□ 0.59
CNIH1-204ENST00000554683 EIF4G3O43432 1585 aaKnown RBP18.69■□□□□ 0.58
CNIH1-204ENST00000554683 ZNF608Q9ULD9 1512 aaPredicted RBP18.68■□□□□ 0.58
CNIH1-204ENST00000554683 RAD54L2Q9Y4B4 1467 aa18.66■□□□□ 0.58
CNIH1-204ENST00000554683 SOGA1O94964 1423 aa18.63■□□□□ 0.57
CNIH1-204ENST00000554683 ABCA10Q8WWZ4 1543 aa18.59■□□□□ 0.57
CNIH1-204ENST00000554683 ABCA5Q8WWZ7 1642 aa18.59■□□□□ 0.57
CNIH1-204ENST00000554683 PBRM1Q86U86 1689 aa18.55■□□□□ 0.56
CNIH1-204ENST00000554683 AQRO60306 1485 aaKnown RBP eCLIP18.53■□□□□ 0.56
CNIH1-204ENST00000554683 MSH5O43196 834 aa18.5■□□□□ 0.55
CNIH1-204ENST00000554683 TDRD9Q8NDG6 1382 aaKnown RBP18.49■□□□□ 0.55
CNIH1-204ENST00000554683 GAPVD1Q14C86 1478 aa18.46■□□□□ 0.55
CNIH1-204ENST00000554683 CHD1O14646 1710 aa18.45■□□□□ 0.54
CNIH1-204ENST00000554683 GRIN2BQ13224 1484 aa18.45■□□□□ 0.54
CNIH1-204ENST00000554683 SNAPC4Q5SXM2 1469 aa18.44■□□□□ 0.54
CNIH1-204ENST00000554683 MAGI1Q96QZ7 1491 aaPredicted RBP18.42■□□□□ 0.54
CNIH1-204ENST00000554683 ADAMTS12P58397 1594 aa18.39■□□□□ 0.53
CNIH1-204ENST00000554683 ERICH3Q5RHP9 1530 aa18.39■□□□□ 0.53
CNIH1-204ENST00000554683 SYNJ2O15056 1496 aa18.33■□□□□ 0.53
CNIH1-204ENST00000554683 KIF27Q86VH2 1401 aa18.31■□□□□ 0.52
CNIH1-204ENST00000554683 CUL7Q14999 1698 aa18.28■□□□□ 0.52
CNIH1-204ENST00000554683 DNAJC5Q9H3Z4 198 aa18.26■□□□□ 0.51
CNIH1-204ENST00000554683 FHAD1B1AJZ9 1412 aa18.24■□□□□ 0.51
CNIH1-204ENST00000554683 GRIN2AQ12879 1464 aa18.24■□□□□ 0.51
CNIH1-204ENST00000554683 TRIM41Q8WV44 630 aa18.23■□□□□ 0.51
CNIH1-204ENST00000554683 CLASP1Q7Z460 1538 aa18.23■□□□□ 0.51
CNIH1-204ENST00000554683 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
CNIH1-204ENST00000554683 RUSC2Q8N2Y8 1516 aa18.19■□□□□ 0.5
CNIH1-204ENST00000554683 CEP170Q5SW79 1584 aa18.19■□□□□ 0.5
CNIH1-204ENST00000554683 IGF1RP08069 1367 aa18.18■□□□□ 0.5
CNIH1-204ENST00000554683 FBLN2P98095 1184 aa18.17■□□□□ 0.5
CNIH1-204ENST00000554683 CHMP7Q8WUX9 453 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms