RNA–Protein interactions for RNA: ENST00000487054.1

LBR-207, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-207ENST00000487054 NISCHQ9Y2I1 1504 aa25.17■■□□□ 1.62
LBR-207ENST00000487054 AEBP2Q6ZN18 517 aaPredicted RBP24.28■■□□□ 1.48
LBR-207ENST00000487054 CHIC1Q5VXU3 224 aa23.24■■□□□ 1.31
LBR-207ENST00000487054 CCDC180Q9P1Z9 1646 aa22.54■■□□□ 1.2
LBR-207ENST00000487054 ABCC9O60706 1549 aa22.48■■□□□ 1.19
LBR-207ENST00000487054 RB1CC1Q8TDY2 1594 aa21.38■■□□□ 1.01
LBR-207ENST00000487054 NACADO15069 1562 aa21.24■□□□□ 0.99
LBR-207ENST00000487054 DCAF8L2P0C7V8 631 aa21.19■□□□□ 0.98
LBR-207ENST00000487054 UNC13AQ9UPW8 1703 aa21.04■□□□□ 0.96
LBR-207ENST00000487054 DNAJC5BQ9UF47 199 aa21.01■□□□□ 0.95
LBR-207ENST00000487054 MYO15BQ96JP2 1530 aa20.95■□□□□ 0.94
LBR-207ENST00000487054 PABPN1Q86U42 306 aaKnown RBP eCLIP20.94■□□□□ 0.94
LBR-207ENST00000487054 ZCCHC6Q5VYS8 1495 aaKnown RBP20.9■□□□□ 0.94
LBR-207ENST00000487054 BICRAQ9NZM4 1560 aa20.84■□□□□ 0.93
LBR-207ENST00000487054 SENP3Q9H4L4 574 aaPredicted RBP20.78■□□□□ 0.92
LBR-207ENST00000487054 DCAF1Q9Y4B6 1507 aa20.75■□□□□ 0.91
LBR-207ENST00000487054 SCRIBQ14160 1630 aa20.62■□□□□ 0.89
LBR-207ENST00000487054 PHF23Q9BUL5 403 aaPredicted RBP20.48■□□□□ 0.87
LBR-207ENST00000487054 SHROOM4Q9ULL8 1493 aa20.42■□□□□ 0.86
LBR-207ENST00000487054 CC2D2AQ9P2K1 1620 aa20.31■□□□□ 0.84
LBR-207ENST00000487054 EIF4G1Q04637 1599 aaKnown RBP20.28■□□□□ 0.84
LBR-207ENST00000487054 CECR2Q9BXF3 1484 aa20.2■□□□□ 0.82
LBR-207ENST00000487054 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
LBR-207ENST00000487054 NCAPD3P42695 1498 aa19.61■□□□□ 0.73
LBR-207ENST00000487054 ATAD2BQ9ULI0 1458 aa19.6■□□□□ 0.73
LBR-207ENST00000487054 SMARCA2P51531 1590 aa19.52■□□□□ 0.71
LBR-207ENST00000487054 BAZ1AQ9NRL2 1556 aaPredicted RBP19.52■□□□□ 0.71
LBR-207ENST00000487054 HMGXB3Q12766 1538 aa19.5■□□□□ 0.71
LBR-207ENST00000487054 MROH2BQ7Z745 1585 aa19.45■□□□□ 0.7
LBR-207ENST00000487054 BAZ1BQ9UIG0 1483 aaKnown RBP19.41■□□□□ 0.7
LBR-207ENST00000487054 PEG3Q9GZU2 1588 aa19.41■□□□□ 0.7
LBR-207ENST00000487054 NESP48681 1621 aa19.38■□□□□ 0.69
LBR-207ENST00000487054 ERCC6Q03468 1493 aa19.34■□□□□ 0.69
LBR-207ENST00000487054 FOXD1Q16676 465 aa19.29■□□□□ 0.68
LBR-207ENST00000487054 WIZO95785 1651 aa19.26■□□□□ 0.67
LBR-207ENST00000487054 CUX2O14529 1486 aa19.24■□□□□ 0.67
LBR-207ENST00000487054 LAMC3Q9Y6N6 1575 aa19.17■□□□□ 0.66
LBR-207ENST00000487054 KIF21AQ7Z4S6 1674 aa19.15■□□□□ 0.66
LBR-207ENST00000487054 THOC2Q8NI27 1593 aaKnown RBP19.15■□□□□ 0.66
LBR-207ENST00000487054 DNAJC5Q9H3Z4 198 aa19.11■□□□□ 0.65
LBR-207ENST00000487054 RSF1Q96T23 1441 aaPredicted RBP19.05■□□□□ 0.64
LBR-207ENST00000487054 CADPSQ9ULU8 1353 aa19.02■□□□□ 0.64
LBR-207ENST00000487054 PDS5BQ9NTI5 1447 aa19■□□□□ 0.63
LBR-207ENST00000487054 TOP2AP11388 1531 aaKnown RBP18.95■□□□□ 0.62
LBR-207ENST00000487054 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
LBR-207ENST00000487054 WDR62O43379 1518 aa18.86■□□□□ 0.61
LBR-207ENST00000487054 CFTRP13569 1480 aa18.84■□□□□ 0.61
LBR-207ENST00000487054 FANCD2Q9BXW9 1451 aa18.84■□□□□ 0.61
LBR-207ENST00000487054 CEP164Q9UPV0 1460 aa18.84■□□□□ 0.61
LBR-207ENST00000487054 CCDC88BA6NC98 1476 aa18.74■□□□□ 0.59
LBR-207ENST00000487054 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
LBR-207ENST00000487054 URB2Q14146 1524 aaKnown RBP18.72■□□□□ 0.59
LBR-207ENST00000487054 PLPPR3Q6T4P5 718 aa18.65■□□□□ 0.58
LBR-207ENST00000487054 TOPBP1Q92547 1522 aa18.51■□□□□ 0.55
LBR-207ENST00000487054 ZNF608Q9ULD9 1512 aaPredicted RBP18.48■□□□□ 0.55
LBR-207ENST00000487054 DNMBPQ6XZF7 1577 aa18.44■□□□□ 0.54
LBR-207ENST00000487054 IFT140Q96RY7 1462 aa18.44■□□□□ 0.54
LBR-207ENST00000487054 EIF4G3O43432 1585 aaKnown RBP18.38■□□□□ 0.53
LBR-207ENST00000487054 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
LBR-207ENST00000487054 TRIM41Q8WV44 630 aa18.37■□□□□ 0.53
LBR-207ENST00000487054 TARBP1Q13395 1621 aaKnown RBP18.37■□□□□ 0.53
LBR-207ENST00000487054 OSCARQ8IYS5 282 aa18.36■□□□□ 0.53
LBR-207ENST00000487054 POLA1P09884 1462 aaPredicted RBP18.33■□□□□ 0.53
LBR-207ENST00000487054 AQRO60306 1485 aaKnown RBP eCLIP18.31■□□□□ 0.522e-7■■■■□ 23.2
LBR-207ENST00000487054 SUPT5HO00267 1087 aaKnown RBP18.3■□□□□ 0.52
LBR-207ENST00000487054 RAD54L2Q9Y4B4 1467 aa18.3■□□□□ 0.52
LBR-207ENST00000487054 CUX1P39880 1505 aa18.26■□□□□ 0.51
LBR-207ENST00000487054 CHD1O14646 1710 aa18.26■□□□□ 0.51
LBR-207ENST00000487054 FGD5Q6ZNL6 1462 aa18.24■□□□□ 0.51
LBR-207ENST00000487054 RIMBP3CA6NJZ7 1639 aa18.23■□□□□ 0.51
LBR-207ENST00000487054 RIMBP3BA6NNM3 1639 aa18.23■□□□□ 0.51
LBR-207ENST00000487054 RIMBP3Q9UFD9 1639 aa18.23■□□□□ 0.51
LBR-207ENST00000487054 SOGA1O94964 1423 aa18.21■□□□□ 0.51
LBR-207ENST00000487054 TDRD9Q8NDG6 1382 aaKnown RBP18.2■□□□□ 0.5
LBR-207ENST00000487054 ARHGEF11O15085 1522 aa18.15■□□□□ 0.5
LBR-207ENST00000487054 WDR97A6NE52 1622 aa18.15■□□□□ 0.5
LBR-207ENST00000487054 POTEDQ86YR6 584 aa18.14■□□□□ 0.49
LBR-207ENST00000487054 FBLN2P98095 1184 aa18.12■□□□□ 0.49
LBR-207ENST00000487054 SNAPC4Q5SXM2 1469 aa18.12■□□□□ 0.49
LBR-207ENST00000487054 PIAS4Q8N2W9 510 aaPredicted RBP18.1■□□□□ 0.49
LBR-207ENST00000487054 PPP6R1Q9UPN7 881 aa18.1■□□□□ 0.49
LBR-207ENST00000487054 ADRA2BP18089 450 aa18.08■□□□□ 0.48
LBR-207ENST00000487054 PBRM1Q86U86 1689 aa18.07■□□□□ 0.48
LBR-207ENST00000487054 MSH5O43196 834 aa18.07■□□□□ 0.48
LBR-207ENST00000487054 GRIN2BQ13224 1484 aa18.03■□□□□ 0.48
LBR-207ENST00000487054 ABCA5Q8WWZ7 1642 aa18.02■□□□□ 0.48
LBR-207ENST00000487054 MAGI1Q96QZ7 1491 aaPredicted RBP18.01■□□□□ 0.47
LBR-207ENST00000487054 SYNJ1O43426 1573 aa18.01■□□□□ 0.47
LBR-207ENST00000487054 CLASP1Q7Z460 1538 aa18■□□□□ 0.47
LBR-207ENST00000487054 ABCA10Q8WWZ4 1543 aa18■□□□□ 0.47
LBR-207ENST00000487054 GAPVD1Q14C86 1478 aa18■□□□□ 0.47
LBR-207ENST00000487054 ARAP1Q96P48 1450 aa18■□□□□ 0.47
LBR-207ENST00000487054 BIVM-ERCC5R4GMW8 1640 aa17.99■□□□□ 0.47
LBR-207ENST00000487054 TOP2BQ02880 1626 aa17.98■□□□□ 0.47
LBR-207ENST00000487054 SYNJ2O15056 1496 aa17.97■□□□□ 0.47
LBR-207ENST00000487054 CYB5RLQ6IPT4 315 aa17.97■□□□□ 0.47
LBR-207ENST00000487054 CHMP7Q8WUX9 453 aaPredicted RBP17.97■□□□□ 0.47
LBR-207ENST00000487054 WRNQ14191 1432 aaPredicted RBP eCLIP17.94■□□□□ 0.46
LBR-207ENST00000487054 ADAMTS12P58397 1594 aa17.87■□□□□ 0.45
LBR-207ENST00000487054 GRIN2AQ12879 1464 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms