RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 NISCHQ9Y2I1 1504 aa26.03■■□□□ 1.76
DDB1-201ENST00000301764 SUPT5HO00267 1087 aaKnown RBP25.5■■□□□ 1.67
DDB1-201ENST00000301764 DCAF8L2P0C7V8 631 aa25.44■■□□□ 1.66
DDB1-201ENST00000301764 SHROOM4Q9ULL8 1493 aa25.1■■□□□ 1.61
DDB1-201ENST00000301764 PCGF6Q9BYE7 350 aa24.74■■□□□ 1.55
DDB1-201ENST00000301764 EHMT2Q96KQ7 1210 aa24.34■■□□□ 1.49
DDB1-201ENST00000301764 HRCP23327 699 aa24.18■■□□□ 1.46
DDB1-201ENST00000301764 PELP1Q8IZL8 1130 aaKnown RBP24.11■■□□□ 1.45
DDB1-201ENST00000301764 FAM9AQ8IZU1 332 aaPredicted RBP23.92■■□□□ 1.42
DDB1-201ENST00000301764 PPARGC1BQ86YN6 1023 aaKnown RBP23.87■■□□□ 1.41
DDB1-201ENST00000301764 ZEB1P37275 1124 aaPredicted RBP23.84■■□□□ 1.41
DDB1-201ENST00000301764 CENPBP07199 599 aaPredicted RBP23.7■■□□□ 1.38
DDB1-201ENST00000301764 TTBK1Q5TCY1 1321 aaPredicted RBP23.65■■□□□ 1.38
DDB1-201ENST00000301764 CHIC1Q5VXU3 224 aa23.57■■□□□ 1.36
DDB1-201ENST00000301764 CCER1Q8TC90 406 aaPredicted RBP23.56■■□□□ 1.36
DDB1-201ENST00000301764 TRIM26Q12899 539 aaPredicted RBP23.56■■□□□ 1.36
DDB1-201ENST00000301764 LOC105371045A0A1W2PR82 267 aa23.5■■□□□ 1.35
DDB1-201ENST00000301764 MYT1Q01538 1121 aa23.45■■□□□ 1.34
DDB1-201ENST00000301764 TRIM41Q8WV44 630 aa23.45■■□□□ 1.34
DDB1-201ENST00000301764 YTHDC1Q96MU7 727 aaKnown RBP23.33■■□□□ 1.33
DDB1-201ENST00000301764 APLP2Q06481 763 aa23.19■■□□□ 1.3
DDB1-201ENST00000301764 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.88■■□□□ 1.25
DDB1-201ENST00000301764 RANGAP1P46060 587 aaPredicted RBP22.88■■□□□ 1.25
DDB1-201ENST00000301764 UBTFP17480 764 aaKnown RBP22.83■■□□□ 1.25
DDB1-201ENST00000301764 DIEXFQ68CQ4 756 aaKnown RBP22.83■■□□□ 1.25
DDB1-201ENST00000301764 GTF3C3Q9Y5Q9 886 aa22.81■■□□□ 1.24
DDB1-201ENST00000301764 ERICH6Q7L0X2 663 aa22.78■■□□□ 1.24
DDB1-201ENST00000301764 ACIN1Q9UKV3 1341 aaKnown RBP22.62■■□□□ 1.21
DDB1-201ENST00000301764 NEFLP07196 543 aa22.6■■□□□ 1.21
DDB1-201ENST00000301764 SCAF1Q9H7N4 1312 aaKnown RBP22.54■■□□□ 1.2
DDB1-201ENST00000301764 HNRNPUL2Q1KMD3 747 aaKnown RBP22.53■■□□□ 1.2
DDB1-201ENST00000301764 DCAF1Q9Y4B6 1507 aa22.36■■□□□ 1.17
DDB1-201ENST00000301764 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
DDB1-201ENST00000301764 NEUROD1Q13562 356 aa22.35■■□□□ 1.17
DDB1-201ENST00000301764 ATP1B4Q9UN42 357 aaPredicted RBP22.25■■□□□ 1.15
DDB1-201ENST00000301764 ZNF316A6NFI3 1004 aaPredicted RBP22.23■■□□□ 1.15
DDB1-201ENST00000301764 ITGAEP38570 1179 aa22.22■■□□□ 1.15
DDB1-201ENST00000301764 BCANQ96GW7 911 aa22.14■■□□□ 1.13
DDB1-201ENST00000301764 ZCCHC6Q5VYS8 1495 aaKnown RBP21.78■■□□□ 1.08
DDB1-201ENST00000301764 MIER1Q8N108 512 aa21.78■■□□□ 1.08
DDB1-201ENST00000301764 CNGB1Q14028 1251 aaPredicted RBP21.75■■□□□ 1.07
DDB1-201ENST00000301764 CCDC180Q9P1Z9 1646 aa21.7■■□□□ 1.06
DDB1-201ENST00000301764 POLR3GLQ9BT43 218 aa21.67■■□□□ 1.06
DDB1-201ENST00000301764 RTL5Q5HYW3 569 aaPredicted RBP21.65■■□□□ 1.06
DDB1-201ENST00000301764 FKBP8Q14318 412 aa21.62■■□□□ 1.05
DDB1-201ENST00000301764 CSRNP3Q8WYN3 585 aa21.61■■□□□ 1.05
DDB1-201ENST00000301764 CDK11AQ9UQ88 783 aaPredicted RBP21.61■■□□□ 1.05
DDB1-201ENST00000301764 CLSPNQ9HAW4 1339 aa21.59■■□□□ 1.05
DDB1-201ENST00000301764 ANP32CO43423 234 aa21.58■■□□□ 1.05
DDB1-201ENST00000301764 FAM50AQ14320 339 aaKnown RBP21.56■■□□□ 1.04
DDB1-201ENST00000301764 DAXXQ9UER7 740 aaPredicted RBP21.54■■□□□ 1.04
DDB1-201ENST00000301764 DDX10Q13206 875 aaKnown RBP21.39■■□□□ 1.02
DDB1-201ENST00000301764 ANP32EQ9BTT0 268 aa21.38■■□□□ 1.01
DDB1-201ENST00000301764 TRIM52Q96A61 297 aa21.35■■□□□ 1.01
DDB1-201ENST00000301764 SUPT16HQ9Y5B9 1047 aaKnown RBP21.24■□□□□ 0.99
DDB1-201ENST00000301764 HNRNPUQ00839 825 aaKnown RBP eCLIP21.23■□□□□ 0.99
DDB1-201ENST00000301764 ABCC9O60706 1549 aa21.19■□□□□ 0.98
DDB1-201ENST00000301764 RSF1Q96T23 1441 aaPredicted RBP21.19■□□□□ 0.98
DDB1-201ENST00000301764 PABPN1Q86U42 306 aaKnown RBP eCLIP21.18■□□□□ 0.98
DDB1-201ENST00000301764 SCRIBQ14160 1630 aa21.17■□□□□ 0.98
DDB1-201ENST00000301764 IRX6P78412 446 aaPredicted RBP21.16■□□□□ 0.98
DDB1-201ENST00000301764 ANP32AP39687 249 aaKnown RBP21.16■□□□□ 0.98
DDB1-201ENST00000301764 CEP162Q5TB80 1403 aa21.15■□□□□ 0.98
DDB1-201ENST00000301764 HIRIP3Q9BW71 556 aaPredicted RBP21.14■□□□□ 0.97
DDB1-201ENST00000301764 NBR1Q14596 966 aa21.13■□□□□ 0.97
DDB1-201ENST00000301764 BCL11AQ9H165 835 aa21.12■□□□□ 0.97
DDB1-201ENST00000301764 NPM2Q86SE8 214 aaKnown RBP21.09■□□□□ 0.97
DDB1-201ENST00000301764 P3H3Q8IVL6 736 aa21.06■□□□□ 0.96
DDB1-201ENST00000301764 ZNF326Q5BKZ1 582 aaKnown RBP21.05■□□□□ 0.96
DDB1-201ENST00000301764 FAM9BQ8IZU0 186 aa21.02■□□□□ 0.96
DDB1-201ENST00000301764 MYT1LQ9UL68 1186 aa21.02■□□□□ 0.96
DDB1-201ENST00000301764 CLIP1P30622 1438 aa21■□□□□ 0.95
DDB1-201ENST00000301764 TONSLQ96HA7 1378 aa20.98■□□□□ 0.95
DDB1-201ENST00000301764 EIF5BO60841 1220 aaKnown RBP20.98■□□□□ 0.95
DDB1-201ENST00000301764 TSHZ2Q9NRE2 1034 aa20.94■□□□□ 0.94
DDB1-201ENST00000301764 TNIKQ9UKE5 1360 aa20.91■□□□□ 0.94
DDB1-201ENST00000301764 ZBTB47Q9UFB7 747 aaPredicted RBP20.89■□□□□ 0.94
DDB1-201ENST00000301764 CCDC136Q96JN2 1154 aa20.88■□□□□ 0.93
DDB1-201ENST00000301764 RBM19Q9Y4C8 960 aaKnown RBP20.87■□□□□ 0.93
DDB1-201ENST00000301764 GOLGA3Q08378 1498 aa20.82■□□□□ 0.92
DDB1-201ENST00000301764 MRS2Q9HD23 443 aa20.82■□□□□ 0.92
DDB1-201ENST00000301764 EEA1Q15075 1411 aa20.77■□□□□ 0.92
DDB1-201ENST00000301764 SALL2Q9Y467 1007 aaPredicted RBP20.76■□□□□ 0.91
DDB1-201ENST00000301764 SIN3AQ96ST3 1273 aa20.73■□□□□ 0.91
DDB1-201ENST00000301764 RB1CC1Q8TDY2 1594 aa20.73■□□□□ 0.91
DDB1-201ENST00000301764 ARID3CA6NKF2 412 aa20.72■□□□□ 0.91
DDB1-201ENST00000301764 SOGA1O94964 1423 aa20.69■□□□□ 0.9
DDB1-201ENST00000301764 SLC4A1APQ9BWU0 796 aaKnown RBP20.68■□□□□ 0.9
DDB1-201ENST00000301764 SENP3-EIF4A1A0A087X0R7 540 aa20.67■□□□□ 0.9
DDB1-201ENST00000301764 CHIC2Q9UKJ5 165 aa20.65■□□□□ 0.9
DDB1-201ENST00000301764 RTN4Q9NQC3 1192 aaKnown RBP20.63■□□□□ 0.89
DDB1-201ENST00000301764 TMC1Q8TDI8 760 aa20.63■□□□□ 0.89
DDB1-201ENST00000301764 B4GALNT3Q6L9W6 998 aa20.63■□□□□ 0.89
DDB1-201ENST00000301764 DEKP35659 375 aaKnown RBP20.62■□□□□ 0.89
DDB1-201ENST00000301764 PPP4R2Q9NY27 417 aa20.62■□□□□ 0.89
DDB1-201ENST00000301764 CECR2Q9BXF3 1484 aa20.61■□□□□ 0.89
DDB1-201ENST00000301764 KCNH8Q96L42 1107 aa20.59■□□□□ 0.89
DDB1-201ENST00000301764 EIF4G2P78344 907 aaKnown RBP eCLIP20.59■□□□□ 0.89
DDB1-201ENST00000301764 NOP58Q9Y2X3 529 aaKnown RBP20.59■□□□□ 0.89
DDB1-201ENST00000301764 WRNQ14191 1432 aaPredicted RBP eCLIP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms