RNA–Protein interactions for RNA: ENST00000382020.8

TUSC3-201, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUSC3, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-201ENST00000382020 NISCHQ9Y2I1 1504 aa26.96■■□□□ 1.91
TUSC3-201ENST00000382020 SHROOM4Q9ULL8 1493 aa25.69■■□□□ 1.7
TUSC3-201ENST00000382020 SUPT5HO00267 1087 aaKnown RBP25.67■■□□□ 1.7
TUSC3-201ENST00000382020 DCAF8L2P0C7V8 631 aa25.54■■□□□ 1.68
TUSC3-201ENST00000382020 PCGF6Q9BYE7 350 aa24.69■■□□□ 1.54
TUSC3-201ENST00000382020 EHMT2Q96KQ7 1210 aa24.65■■□□□ 1.54
TUSC3-201ENST00000382020 PPARGC1BQ86YN6 1023 aaKnown RBP24.3■■□□□ 1.48
TUSC3-201ENST00000382020 HRCP23327 699 aa24.25■■□□□ 1.47
TUSC3-201ENST00000382020 FAM9AQ8IZU1 332 aaPredicted RBP24.09■■□□□ 1.45
TUSC3-201ENST00000382020 LOC105371045A0A1W2PR82 267 aa24.01■■□□□ 1.43
TUSC3-201ENST00000382020 CHIC1Q5VXU3 224 aa23.93■■□□□ 1.42
TUSC3-201ENST00000382020 TTBK1Q5TCY1 1321 aaPredicted RBP23.82■■□□□ 1.4
TUSC3-201ENST00000382020 PELP1Q8IZL8 1130 aaKnown RBP23.68■■□□□ 1.38
TUSC3-201ENST00000382020 MYO15BQ96JP2 1530 aa23.39■■□□□ 1.33
TUSC3-201ENST00000382020 TRIM41Q8WV44 630 aa23.36■■□□□ 1.33
TUSC3-201ENST00000382020 TRIM26Q12899 539 aaPredicted RBP23.29■■□□□ 1.32
TUSC3-201ENST00000382020 CCER1Q8TC90 406 aaPredicted RBP23.13■■□□□ 1.29
TUSC3-201ENST00000382020 SCAF1Q9H7N4 1312 aaKnown RBP23.11■■□□□ 1.29
TUSC3-201ENST00000382020 YTHDC1Q96MU7 727 aaKnown RBP23.03■■□□□ 1.28
TUSC3-201ENST00000382020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.02■■□□□ 1.28
TUSC3-201ENST00000382020 RANGAP1P46060 587 aaPredicted RBP23.02■■□□□ 1.28
TUSC3-201ENST00000382020 ZEB1P37275 1124 aaPredicted RBP22.93■■□□□ 1.26
TUSC3-201ENST00000382020 CCDC180Q9P1Z9 1646 aa22.78■■□□□ 1.24
TUSC3-201ENST00000382020 CENPBP07199 599 aaPredicted RBP22.78■■□□□ 1.24
TUSC3-201ENST00000382020 MYT1Q01538 1121 aa22.77■■□□□ 1.24
TUSC3-201ENST00000382020 GTF3C3Q9Y5Q9 886 aa22.77■■□□□ 1.24
TUSC3-201ENST00000382020 UBTFP17480 764 aaKnown RBP22.63■■□□□ 1.21
TUSC3-201ENST00000382020 NEUROD1Q13562 356 aa22.61■■□□□ 1.21
TUSC3-201ENST00000382020 ZCCHC6Q5VYS8 1495 aaKnown RBP22.61■■□□□ 1.21
TUSC3-201ENST00000382020 ACIN1Q9UKV3 1341 aaKnown RBP22.59■■□□□ 1.21
TUSC3-201ENST00000382020 HNRNPUL2Q1KMD3 747 aaKnown RBP22.51■■□□□ 1.19
TUSC3-201ENST00000382020 DIEXFQ68CQ4 756 aaKnown RBP22.51■■□□□ 1.19
TUSC3-201ENST00000382020 DCAF1Q9Y4B6 1507 aa22.44■■□□□ 1.18
TUSC3-201ENST00000382020 APLP2Q06481 763 aa22.38■■□□□ 1.17
TUSC3-201ENST00000382020 ITGAEP38570 1179 aa22.18■■□□□ 1.14
TUSC3-201ENST00000382020 SCRIBQ14160 1630 aa22.03■■□□□ 1.12
TUSC3-201ENST00000382020 ABCC9O60706 1549 aa22.02■■□□□ 1.12
TUSC3-201ENST00000382020 ATP1B4Q9UN42 357 aaPredicted RBP22■■□□□ 1.11
TUSC3-201ENST00000382020 ZNF316A6NFI3 1004 aaPredicted RBP21.92■■□□□ 1.1
TUSC3-201ENST00000382020 BCANQ96GW7 911 aa21.91■■□□□ 1.1
TUSC3-201ENST00000382020 RSF1Q96T23 1441 aaPredicted RBP21.9■■□□□ 1.1
TUSC3-201ENST00000382020 PABPN1Q86U42 306 aaKnown RBP eCLIP21.88■■□□□ 1.09
TUSC3-201ENST00000382020 MIER1Q8N108 512 aa21.86■■□□□ 1.09
TUSC3-201ENST00000382020 CSRNP3Q8WYN3 585 aa21.69■■□□□ 1.06
TUSC3-201ENST00000382020 RB1CC1Q8TDY2 1594 aa21.67■■□□□ 1.06
TUSC3-201ENST00000382020 CNGB1Q14028 1251 aaPredicted RBP21.66■■□□□ 1.06
TUSC3-201ENST00000382020 CECR2Q9BXF3 1484 aa21.62■■□□□ 1.05
TUSC3-201ENST00000382020 BCL11AQ9H165 835 aa21.53■■□□□ 1.04
TUSC3-201ENST00000382020 ERICH6Q7L0X2 663 aa21.52■■□□□ 1.04
TUSC3-201ENST00000382020 HIRIP3Q9BW71 556 aaPredicted RBP21.48■■□□□ 1.03
TUSC3-201ENST00000382020 NEFLP07196 543 aa21.47■■□□□ 1.03
TUSC3-201ENST00000382020 CEP162Q5TB80 1403 aa21.45■■□□□ 1.02
TUSC3-201ENST00000382020 FAM50AQ14320 339 aaKnown RBP21.4■■□□□ 1.02
TUSC3-201ENST00000382020 SOGA1O94964 1423 aa21.39■■□□□ 1.01
TUSC3-201ENST00000382020 ANP32EQ9BTT0 268 aa21.38■■□□□ 1.01
TUSC3-201ENST00000382020 NACADO15069 1562 aa21.37■■□□□ 1.01
TUSC3-201ENST00000382020 P3H3Q8IVL6 736 aa21.36■■□□□ 1.01
TUSC3-201ENST00000382020 ABCC8Q09428 1581 aa21.32■■□□□ 1
TUSC3-201ENST00000382020 DDX10Q13206 875 aaKnown RBP21.3■■□□□ 1
TUSC3-201ENST00000382020 MROH2BQ7Z745 1585 aa21.3■■□□□ 1
TUSC3-201ENST00000382020 SUPT16HQ9Y5B9 1047 aaKnown RBP21.28■■□□□ 1
TUSC3-201ENST00000382020 FKBP8Q14318 412 aa21.28■■□□□ 1
TUSC3-201ENST00000382020 TRIM52Q96A61 297 aa21.28■■□□□ 1
TUSC3-201ENST00000382020 POLR3GLQ9BT43 218 aa21.27■■□□□ 1
TUSC3-201ENST00000382020 CCDC88BA6NC98 1476 aa21.27■□□□□ 0.99
TUSC3-201ENST00000382020 IRX6P78412 446 aaPredicted RBP21.18■□□□□ 0.98
TUSC3-201ENST00000382020 TSHZ2Q9NRE2 1034 aa21.17■□□□□ 0.98
TUSC3-201ENST00000382020 RUSC2Q8N2Y8 1516 aa21.16■□□□□ 0.98
TUSC3-201ENST00000382020 KCNH8Q96L42 1107 aa21.15■□□□□ 0.98
TUSC3-201ENST00000382020 CLIP1P30622 1438 aa21.14■□□□□ 0.98
TUSC3-201ENST00000382020 WIZO95785 1651 aa21.13■□□□□ 0.97
TUSC3-201ENST00000382020 SENP3-EIF4A1A0A087X0R7 540 aa21.11■□□□□ 0.97
TUSC3-201ENST00000382020 ARID3CA6NKF2 412 aa21.07■□□□□ 0.96
TUSC3-201ENST00000382020 TNIKQ9UKE5 1360 aa21.07■□□□□ 0.96
TUSC3-201ENST00000382020 SIN3AQ96ST3 1273 aa21.02■□□□□ 0.96
TUSC3-201ENST00000382020 KANK4Q5T7N3 995 aaPredicted RBP21.01■□□□□ 0.95
TUSC3-201ENST00000382020 ANP32CO43423 234 aa20.98■□□□□ 0.95
TUSC3-201ENST00000382020 GOLGA3Q08378 1498 aa20.95■□□□□ 0.94
TUSC3-201ENST00000382020 WRNQ14191 1432 aaPredicted RBP eCLIP20.92■□□□□ 0.94
TUSC3-201ENST00000382020 HNRNPUQ00839 825 aaKnown RBP eCLIP20.89■□□□□ 0.93
TUSC3-201ENST00000382020 ZNF326Q5BKZ1 582 aaKnown RBP20.85■□□□□ 0.93
TUSC3-201ENST00000382020 RBM19Q9Y4C8 960 aaKnown RBP20.84■□□□□ 0.93
TUSC3-201ENST00000382020 CLSPNQ9HAW4 1339 aa20.84■□□□□ 0.93
TUSC3-201ENST00000382020 NBR1Q14596 966 aa20.8■□□□□ 0.92
TUSC3-201ENST00000382020 FAM9BQ8IZU0 186 aa20.79■□□□□ 0.92
TUSC3-201ENST00000382020 CHIC2Q9UKJ5 165 aa20.79■□□□□ 0.92
TUSC3-201ENST00000382020 CDK11AQ9UQ88 783 aaPredicted RBP20.77■□□□□ 0.92
TUSC3-201ENST00000382020 BAZ1AQ9NRL2 1556 aaPredicted RBP20.7■□□□□ 0.9
TUSC3-201ENST00000382020 CEP164Q9UPV0 1460 aa20.7■□□□□ 0.9
TUSC3-201ENST00000382020 VPS8Q8N3P4 1428 aa20.67■□□□□ 0.9
TUSC3-201ENST00000382020 RAPGEF2Q9Y4G8 1499 aa20.67■□□□□ 0.9
TUSC3-201ENST00000382020 EEA1Q15075 1411 aa20.66■□□□□ 0.9
TUSC3-201ENST00000382020 SALL2Q9Y467 1007 aaPredicted RBP20.66■□□□□ 0.9
TUSC3-201ENST00000382020 TONSLQ96HA7 1378 aa20.64■□□□□ 0.9
TUSC3-201ENST00000382020 DHX57Q6P158 1386 aaKnown RBP20.62■□□□□ 0.89
TUSC3-201ENST00000382020 RTL5Q5HYW3 569 aaPredicted RBP20.6■□□□□ 0.89
TUSC3-201ENST00000382020 RRP7BPQ9NSQ0 103 aa20.59■□□□□ 0.89
TUSC3-201ENST00000382020 NPM2Q86SE8 214 aaKnown RBP20.59■□□□□ 0.89
TUSC3-201ENST00000382020 RTN4Q9NQC3 1192 aaKnown RBP20.58■□□□□ 0.89
TUSC3-201ENST00000382020 CCNB3Q8WWL7 1395 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms