RNA–Protein interactions for RNA: ENST00000557690.5

CNIH1-207, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 3 BASIC

Gene CNIH1, Length 838 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-207ENST00000557690 AEBP2Q6ZN18 517 aaPredicted RBP28.65■■■□□ 2.18
CNIH1-207ENST00000557690 NISCHQ9Y2I1 1504 aa27.65■■■□□ 2.02
CNIH1-207ENST00000557690 CHIC1Q5VXU3 224 aa26.9■■□□□ 1.9
CNIH1-207ENST00000557690 CCDC180Q9P1Z9 1646 aa24.94■■□□□ 1.58
CNIH1-207ENST00000557690 ABCC9O60706 1549 aa24.72■■□□□ 1.55
CNIH1-207ENST00000557690 SENP3Q9H4L4 574 aaPredicted RBP24.65■■□□□ 1.54
CNIH1-207ENST00000557690 PHF23Q9BUL5 403 aaPredicted RBP24.21■■□□□ 1.47
CNIH1-207ENST00000557690 RB1CC1Q8TDY2 1594 aa23.63■■□□□ 1.37
CNIH1-207ENST00000557690 NACADO15069 1562 aa23.44■■□□□ 1.34
CNIH1-207ENST00000557690 UNC13AQ9UPW8 1703 aa23.28■■□□□ 1.32
CNIH1-207ENST00000557690 DCAF8L2P0C7V8 631 aa23.24■■□□□ 1.31
CNIH1-207ENST00000557690 MYO15BQ96JP2 1530 aa23.1■■□□□ 1.29
CNIH1-207ENST00000557690 DNAJC5BQ9UF47 199 aa23.02■■□□□ 1.28
CNIH1-207ENST00000557690 FOXD1Q16676 465 aa22.97■■□□□ 1.27
CNIH1-207ENST00000557690 PABPN1Q86U42 306 aaKnown RBP eCLIP22.95■■□□□ 1.26
CNIH1-207ENST00000557690 ZCCHC6Q5VYS8 1495 aaKnown RBP22.93■■□□□ 1.26
CNIH1-207ENST00000557690 BICRAQ9NZM4 1560 aa22.92■■□□□ 1.26
CNIH1-207ENST00000557690 DCAF1Q9Y4B6 1507 aa22.85■■□□□ 1.25
CNIH1-207ENST00000557690 SCRIBQ14160 1630 aa22.68■■□□□ 1.22
CNIH1-207ENST00000557690 SHROOM4Q9ULL8 1493 aa22.58■■□□□ 1.2
CNIH1-207ENST00000557690 CC2D2AQ9P2K1 1620 aa22.4■■□□□ 1.18
CNIH1-207ENST00000557690 EIF4G1Q04637 1599 aaKnown RBP22.35■■□□□ 1.17
CNIH1-207ENST00000557690 CECR2Q9BXF3 1484 aa22.25■■□□□ 1.15
CNIH1-207ENST00000557690 POTEDQ86YR6 584 aa22.11■■□□□ 1.13
CNIH1-207ENST00000557690 MSH5O43196 834 aa21.79■■□□□ 1.08
CNIH1-207ENST00000557690 SMARCA4P51532 1647 aa21.63■■□□□ 1.05
CNIH1-207ENST00000557690 NCAPD3P42695 1498 aa21.57■■□□□ 1.04
CNIH1-207ENST00000557690 SMARCA2P51531 1590 aa21.54■■□□□ 1.04
CNIH1-207ENST00000557690 ATAD2BQ9ULI0 1458 aa21.52■■□□□ 1.04
CNIH1-207ENST00000557690 HMGXB3Q12766 1538 aa21.5■■□□□ 1.03
CNIH1-207ENST00000557690 BAZ1AQ9NRL2 1556 aaPredicted RBP21.49■■□□□ 1.03
CNIH1-207ENST00000557690 PEG3Q9GZU2 1588 aa21.38■■□□□ 1.01
CNIH1-207ENST00000557690 BAZ1BQ9UIG0 1483 aaKnown RBP21.37■■□□□ 1.01
CNIH1-207ENST00000557690 ERCC6Q03468 1493 aa21.36■■□□□ 1.01
CNIH1-207ENST00000557690 PIAS4Q8N2W9 510 aaPredicted RBP21.34■■□□□ 1.01
CNIH1-207ENST00000557690 MROH2BQ7Z745 1585 aa21.31■■□□□ 1
CNIH1-207ENST00000557690 CUX2O14529 1486 aa21.28■■□□□ 1
CNIH1-207ENST00000557690 NESP48681 1621 aa21.26■□□□□ 0.99
CNIH1-207ENST00000557690 PLPPR3Q6T4P5 718 aa21.18■□□□□ 0.98
CNIH1-207ENST00000557690 LAMC3Q9Y6N6 1575 aa21.18■□□□□ 0.98
CNIH1-207ENST00000557690 KIF21AQ7Z4S6 1674 aa21.16■□□□□ 0.98
CNIH1-207ENST00000557690 WIZO95785 1651 aa21.15■□□□□ 0.98
CNIH1-207ENST00000557690 THOC2Q8NI27 1593 aaKnown RBP21.11■□□□□ 0.97
CNIH1-207ENST00000557690 DNAJC5Q9H3Z4 198 aa21.1■□□□□ 0.97
CNIH1-207ENST00000557690 PPP6R1Q9UPN7 881 aa21.01■□□□□ 0.95
CNIH1-207ENST00000557690 PDS5BQ9NTI5 1447 aa20.96■□□□□ 0.95
CNIH1-207ENST00000557690 ADRA2BP18089 450 aa20.92■□□□□ 0.94
CNIH1-207ENST00000557690 CADPSQ9ULU8 1353 aa20.9■□□□□ 0.94
CNIH1-207ENST00000557690 RSF1Q96T23 1441 aaPredicted RBP20.84■□□□□ 0.93
CNIH1-207ENST00000557690 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.92
CNIH1-207ENST00000557690 MRC2Q9UBG0 1479 aa20.81■□□□□ 0.92
CNIH1-207ENST00000557690 PRDM2Q13029 1718 aa20.81■□□□□ 0.92
CNIH1-207ENST00000557690 WDR62O43379 1518 aa20.78■□□□□ 0.92
CNIH1-207ENST00000557690 CEP164Q9UPV0 1460 aa20.76■□□□□ 0.91
CNIH1-207ENST00000557690 FANCD2Q9BXW9 1451 aa20.72■□□□□ 0.91
CNIH1-207ENST00000557690 CFTRP13569 1480 aa20.7■□□□□ 0.9
CNIH1-207ENST00000557690 URB2Q14146 1524 aaKnown RBP20.55■□□□□ 0.88
CNIH1-207ENST00000557690 CCDC88BA6NC98 1476 aa20.54■□□□□ 0.88
CNIH1-207ENST00000557690 TOPBP1Q92547 1522 aa20.35■□□□□ 0.85
CNIH1-207ENST00000557690 DNMBPQ6XZF7 1577 aa20.33■□□□□ 0.84
CNIH1-207ENST00000557690 IFT140Q96RY7 1462 aa20.3■□□□□ 0.84
CNIH1-207ENST00000557690 ABCC8Q09428 1581 aa20.3■□□□□ 0.84
CNIH1-207ENST00000557690 ZNF608Q9ULD9 1512 aaPredicted RBP20.27■□□□□ 0.84
CNIH1-207ENST00000557690 EIF4G3O43432 1585 aaKnown RBP20.27■□□□□ 0.84
CNIH1-207ENST00000557690 TRIM41Q8WV44 630 aa20.26■□□□□ 0.83
CNIH1-207ENST00000557690 OSCARQ8IYS5 282 aa20.24■□□□□ 0.83
CNIH1-207ENST00000557690 TARBP1Q13395 1621 aaKnown RBP20.22■□□□□ 0.83
CNIH1-207ENST00000557690 CHD1O14646 1710 aa20.2■□□□□ 0.82
CNIH1-207ENST00000557690 RIMBP3CA6NJZ7 1639 aa20.14■□□□□ 0.81
CNIH1-207ENST00000557690 RIMBP3BA6NNM3 1639 aa20.14■□□□□ 0.81
CNIH1-207ENST00000557690 RIMBP3Q9UFD9 1639 aa20.14■□□□□ 0.81
CNIH1-207ENST00000557690 POLA1P09884 1462 aaPredicted RBP20.13■□□□□ 0.81
CNIH1-207ENST00000557690 AQRO60306 1485 aaKnown RBP eCLIP20.08■□□□□ 0.81
CNIH1-207ENST00000557690 RAD54L2Q9Y4B4 1467 aa20.04■□□□□ 0.8
CNIH1-207ENST00000557690 CUX1P39880 1505 aa20.03■□□□□ 0.8
CNIH1-207ENST00000557690 WDR97A6NE52 1622 aa20.03■□□□□ 0.8
CNIH1-207ENST00000557690 FGD5Q6ZNL6 1462 aa20.03■□□□□ 0.8
CNIH1-207ENST00000557690 ARHGEF11O15085 1522 aa20.01■□□□□ 0.79
CNIH1-207ENST00000557690 SOGA1O94964 1423 aa20.01■□□□□ 0.79
CNIH1-207ENST00000557690 PBRM1Q86U86 1689 aa19.98■□□□□ 0.79
CNIH1-207ENST00000557690 SUPT5HO00267 1087 aaKnown RBP19.95■□□□□ 0.78
CNIH1-207ENST00000557690 TDRD9Q8NDG6 1382 aaKnown RBP19.94■□□□□ 0.78
CNIH1-207ENST00000557690 FBLN2P98095 1184 aa19.92■□□□□ 0.78
CNIH1-207ENST00000557690 SNAPC4Q5SXM2 1469 aa19.92■□□□□ 0.78
CNIH1-207ENST00000557690 MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
CNIH1-207ENST00000557690 GRIN2BQ13224 1484 aa19.86■□□□□ 0.77
CNIH1-207ENST00000557690 SYNJ1O43426 1573 aa19.84■□□□□ 0.77
CNIH1-207ENST00000557690 ABCA5Q8WWZ7 1642 aa19.84■□□□□ 0.77
CNIH1-207ENST00000557690 BIVM-ERCC5R4GMW8 1640 aa19.83■□□□□ 0.76
CNIH1-207ENST00000557690 CLASP1Q7Z460 1538 aa19.82■□□□□ 0.76
CNIH1-207ENST00000557690 GAPVD1Q14C86 1478 aa19.8■□□□□ 0.76
CNIH1-207ENST00000557690 ARAP1Q96P48 1450 aa19.8■□□□□ 0.76
CNIH1-207ENST00000557690 ABCA10Q8WWZ4 1543 aa19.79■□□□□ 0.76
CNIH1-207ENST00000557690 SYNJ2O15056 1496 aa19.79■□□□□ 0.76
CNIH1-207ENST00000557690 TOP2BQ02880 1626 aa19.77■□□□□ 0.76
CNIH1-207ENST00000557690 CYB5RLQ6IPT4 315 aa19.77■□□□□ 0.76
CNIH1-207ENST00000557690 CHMP7Q8WUX9 453 aaPredicted RBP19.77■□□□□ 0.76
CNIH1-207ENST00000557690 WRNQ14191 1432 aaPredicted RBP eCLIP19.7■□□□□ 0.74
CNIH1-207ENST00000557690 ADAMTS12P58397 1594 aa19.67■□□□□ 0.74
CNIH1-207ENST00000557690 GRIN2AQ12879 1464 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms