RNA–Protein interactions for RNA: ENST00000558975.1

SEMA4B-207, Transcript of semaphorin 4B, humanhuman

TSL 4

Gene SEMA4B, Length 382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-207ENST00000558975 NISCHQ9Y2I1 1504 aa34.89■■■■□ 3.18
SEMA4B-207ENST00000558975 CCDC180Q9P1Z9 1646 aa31.16■■■□□ 2.58
SEMA4B-207ENST00000558975 ABCC9O60706 1549 aa30.58■■■□□ 2.49
SEMA4B-207ENST00000558975 RB1CC1Q8TDY2 1594 aa29.39■■■□□ 2.3
SEMA4B-207ENST00000558975 DCAF8L2P0C7V8 631 aa29.36■■■□□ 2.29
SEMA4B-207ENST00000558975 NACADO15069 1562 aa29.28■■■□□ 2.28
SEMA4B-207ENST00000558975 ZCCHC6Q5VYS8 1495 aaKnown RBP29.03■■■□□ 2.24
SEMA4B-207ENST00000558975 MYO15BQ96JP2 1530 aa28.98■■■□□ 2.23
SEMA4B-207ENST00000558975 DCAF1Q9Y4B6 1507 aa28.83■■■□□ 2.21
SEMA4B-207ENST00000558975 UNC13AQ9UPW8 1703 aa28.74■■■□□ 2.19
SEMA4B-207ENST00000558975 PABPN1Q86U42 306 aaKnown RBP eCLIP28.53■■■□□ 2.16
SEMA4B-207ENST00000558975 SCRIBQ14160 1630 aa28.44■■■□□ 2.14
SEMA4B-207ENST00000558975 BICRAQ9NZM4 1560 aa28.39■■■□□ 2.14
SEMA4B-207ENST00000558975 SHROOM4Q9ULL8 1493 aa28.12■■■□□ 2.09
SEMA4B-207ENST00000558975 DNAJC5BQ9UF47 199 aa28.02■■■□□ 2.08
SEMA4B-207ENST00000558975 EIF4G1Q04637 1599 aaKnown RBP27.72■■■□□ 2.03
SEMA4B-207ENST00000558975 CC2D2AQ9P2K1 1620 aa27.66■■■□□ 2.02
SEMA4B-207ENST00000558975 CECR2Q9BXF3 1484 aa27.48■■□□□ 1.99
SEMA4B-207ENST00000558975 SMARCA4P51532 1647 aa27.15■■□□□ 1.94
SEMA4B-207ENST00000558975 BAZ1AQ9NRL2 1556 aaPredicted RBP27.1■■□□□ 1.93
SEMA4B-207ENST00000558975 SMARCA2P51531 1590 aa27.01■■□□□ 1.91
SEMA4B-207ENST00000558975 ATAD2BQ9ULI0 1458 aa26.97■■□□□ 1.91
SEMA4B-207ENST00000558975 NCAPD3P42695 1498 aa26.94■■□□□ 1.9
SEMA4B-207ENST00000558975 MROH2BQ7Z745 1585 aa26.88■■□□□ 1.89
SEMA4B-207ENST00000558975 HMGXB3Q12766 1538 aa26.86■■□□□ 1.89
SEMA4B-207ENST00000558975 BAZ1BQ9UIG0 1483 aaKnown RBP26.82■■□□□ 1.88
SEMA4B-207ENST00000558975 PEG3Q9GZU2 1588 aa26.81■■□□□ 1.88
SEMA4B-207ENST00000558975 WIZO95785 1651 aa26.66■■□□□ 1.86
SEMA4B-207ENST00000558975 RSF1Q96T23 1441 aaPredicted RBP26.51■■□□□ 1.83
SEMA4B-207ENST00000558975 ERCC6Q03468 1493 aa26.44■■□□□ 1.82
SEMA4B-207ENST00000558975 NESP48681 1621 aa26.39■■□□□ 1.81
SEMA4B-207ENST00000558975 LAMC3Q9Y6N6 1575 aa26.35■■□□□ 1.81
SEMA4B-207ENST00000558975 TOP2AP11388 1531 aaKnown RBP26.34■■□□□ 1.81
SEMA4B-207ENST00000558975 CADPSQ9ULU8 1353 aa26.19■■□□□ 1.78
SEMA4B-207ENST00000558975 PDS5BQ9NTI5 1447 aa26.17■■□□□ 1.78
SEMA4B-207ENST00000558975 KIF21AQ7Z4S6 1674 aa26.17■■□□□ 1.78
SEMA4B-207ENST00000558975 CUX2O14529 1486 aa26.11■■□□□ 1.77
SEMA4B-207ENST00000558975 THOC2Q8NI27 1593 aaKnown RBP26.03■■□□□ 1.76
SEMA4B-207ENST00000558975 CCDC88BA6NC98 1476 aa25.99■■□□□ 1.75
SEMA4B-207ENST00000558975 CFTRP13569 1480 aa25.99■■□□□ 1.75
SEMA4B-207ENST00000558975 PRDM2Q13029 1718 aa25.97■■□□□ 1.75
SEMA4B-207ENST00000558975 CEP164Q9UPV0 1460 aa25.94■■□□□ 1.74
SEMA4B-207ENST00000558975 FANCD2Q9BXW9 1451 aa25.93■■□□□ 1.74
SEMA4B-207ENST00000558975 MRC2Q9UBG0 1479 aa25.91■■□□□ 1.74
SEMA4B-207ENST00000558975 SUPT5HO00267 1087 aaKnown RBP25.89■■□□□ 1.74
SEMA4B-207ENST00000558975 WDR62O43379 1518 aa25.79■■□□□ 1.72
SEMA4B-207ENST00000558975 URB2Q14146 1524 aaKnown RBP25.64■■□□□ 1.7
SEMA4B-207ENST00000558975 ABCC8Q09428 1581 aa25.52■■□□□ 1.68
SEMA4B-207ENST00000558975 TOPBP1Q92547 1522 aa25.49■■□□□ 1.67
SEMA4B-207ENST00000558975 DNMBPQ6XZF7 1577 aa25.48■■□□□ 1.67
SEMA4B-207ENST00000558975 DNAJC5Q9H3Z4 198 aa25.4■■□□□ 1.66
SEMA4B-207ENST00000558975 IFT140Q96RY7 1462 aa25.37■■□□□ 1.65
SEMA4B-207ENST00000558975 POLA1P09884 1462 aaPredicted RBP25.25■■□□□ 1.63
SEMA4B-207ENST00000558975 CUX1P39880 1505 aa25.24■■□□□ 1.63
SEMA4B-207ENST00000558975 ZNF608Q9ULD9 1512 aaPredicted RBP25.23■■□□□ 1.63
SEMA4B-207ENST00000558975 TARBP1Q13395 1621 aaKnown RBP25.21■■□□□ 1.63
SEMA4B-207ENST00000558975 FGD5Q6ZNL6 1462 aa25.21■■□□□ 1.63
SEMA4B-207ENST00000558975 EIF4G3O43432 1585 aaKnown RBP25.2■■□□□ 1.62
SEMA4B-207ENST00000558975 SOGA1O94964 1423 aa25.17■■□□□ 1.62
SEMA4B-207ENST00000558975 RAD54L2Q9Y4B4 1467 aa25.15■■□□□ 1.62
SEMA4B-207ENST00000558975 AQRO60306 1485 aaKnown RBP eCLIP25.09■■□□□ 1.615e-7■■■■□ 24.3
SEMA4B-207ENST00000558975 WRNQ14191 1432 aaPredicted RBP eCLIP25.07■■□□□ 1.6
SEMA4B-207ENST00000558975 WDR97A6NE52 1622 aa25.04■■□□□ 1.6
SEMA4B-207ENST00000558975 BIVM-ERCC5R4GMW8 1640 aa25.04■■□□□ 1.6
SEMA4B-207ENST00000558975 TDRD9Q8NDG6 1382 aaKnown RBP25.04■■□□□ 1.6
SEMA4B-207ENST00000558975 OSCARQ8IYS5 282 aa25.03■■□□□ 1.6
SEMA4B-207ENST00000558975 TOP2BQ02880 1626 aa25.03■■□□□ 1.6
SEMA4B-207ENST00000558975 SYNJ1O43426 1573 aa25.01■■□□□ 1.59
SEMA4B-207ENST00000558975 CHD1O14646 1710 aa24.96■■□□□ 1.59
SEMA4B-207ENST00000558975 PBRM1Q86U86 1689 aa24.94■■□□□ 1.58
SEMA4B-207ENST00000558975 FBLN2P98095 1184 aa24.93■■□□□ 1.58
SEMA4B-207ENST00000558975 ABCA10Q8WWZ4 1543 aa24.91■■□□□ 1.58
SEMA4B-207ENST00000558975 GRIN2BQ13224 1484 aa24.89■■□□□ 1.58
SEMA4B-207ENST00000558975 GAPVD1Q14C86 1478 aa24.89■■□□□ 1.57
SEMA4B-207ENST00000558975 SNAPC4Q5SXM2 1469 aa24.89■■□□□ 1.57
SEMA4B-207ENST00000558975 ABCA5Q8WWZ7 1642 aa24.86■■□□□ 1.57
SEMA4B-207ENST00000558975 MAGI1Q96QZ7 1491 aaPredicted RBP24.84■■□□□ 1.57
SEMA4B-207ENST00000558975 CHMP7Q8WUX9 453 aaPredicted RBP24.8■■□□□ 1.56
SEMA4B-207ENST00000558975 SYNJ2O15056 1496 aa24.75■■□□□ 1.55
SEMA4B-207ENST00000558975 RIMBP3CA6NJZ7 1639 aa24.66■■□□□ 1.54
SEMA4B-207ENST00000558975 RIMBP3BA6NNM3 1639 aa24.66■■□□□ 1.54
SEMA4B-207ENST00000558975 RIMBP3Q9UFD9 1639 aa24.66■■□□□ 1.54
SEMA4B-207ENST00000558975 TRIM41Q8WV44 630 aa24.66■■□□□ 1.54
SEMA4B-207ENST00000558975 ERICH3Q5RHP9 1530 aa24.66■■□□□ 1.54
SEMA4B-207ENST00000558975 ADAMTS12P58397 1594 aa24.65■■□□□ 1.54
SEMA4B-207ENST00000558975 ARHGEF11O15085 1522 aa24.61■■□□□ 1.53
SEMA4B-207ENST00000558975 FHAD1B1AJZ9 1412 aa24.58■■□□□ 1.53
SEMA4B-207ENST00000558975 GRIN2AQ12879 1464 aa24.58■■□□□ 1.52
SEMA4B-207ENST00000558975 KIF27Q86VH2 1401 aa24.57■■□□□ 1.52
SEMA4B-207ENST00000558975 CLASP1Q7Z460 1538 aa24.56■■□□□ 1.52
SEMA4B-207ENST00000558975 CUL7Q14999 1698 aa24.47■■□□□ 1.51
SEMA4B-207ENST00000558975 CEP170Q5SW79 1584 aa24.45■■□□□ 1.5
SEMA4B-207ENST00000558975 CYB5RLQ6IPT4 315 aa24.42■■□□□ 1.5
SEMA4B-207ENST00000558975 NUP160Q12769 1436 aa24.42■■□□□ 1.5
SEMA4B-207ENST00000558975 IGF1RP08069 1367 aa24.4■■□□□ 1.5
SEMA4B-207ENST00000558975 ARAP1Q96P48 1450 aa24.38■■□□□ 1.49
SEMA4B-207ENST00000558975 CARMIL1Q5VZK9 1371 aa24.31■■□□□ 1.48
SEMA4B-207ENST00000558975 RUSC2Q8N2Y8 1516 aa24.29■■□□□ 1.48
SEMA4B-207ENST00000558975 SHROOM2Q13796 1616 aa24.28■■□□□ 1.48
SEMA4B-207ENST00000558975 ERCC6L2Q5T890 1561 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms